4.0:Information of module
short 12-degree-
In comparison with rGRF help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010224 response to UV-B BP 3.733e-07
GO:0009628 response to abiotic stimulus BP 5.215e-07
GO:1901700 response to oxygen-containing compound BP 7.732e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0080167 response to karrikin BP 4.080e-04
GO:0006284 base-excision repair BP 6.771e-04
GO:0032879 regulation of localization BP 8.349e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
short 12-degree-		 Log2 signal ratio
rGRF
1 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.525 0.002
2 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.494 -0.004
3 252123_at AT3G51240 F3'H, F3H, flavanone 3-hydroxylase, TT6, TRANSPARENT TESTA 6 0.409 -0.064
4 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.399 -0.173
5 264261_at AT1G09240 ATNAS3, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 3, NAS3, nicotianamine synthase 3 0.339 -0.002
6 249677_at AT5G35970 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.327 -0.059
7 251753_at AT3G55760 unknown 0.313 -0.029
8 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.299 0.036
9 245427_at AT4G17550 AtG3Pp4, glycerol-3-phosphate permease 4, G3Pp4, glycerol-3-phosphate permease 4 0.295 -0.072
10 251827_at AT3G55120 A11, AtCHI, CFI, CHALCONE FLAVANONE ISOMERASE, CHI, chalcone isomerase, TT5, TRANSPARENT TESTA 5 0.289 -0.084
11 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 0.283 0.016
12 245998_at AT5G20830 ASUS1, atsus1, SUS1, sucrose synthase 1 0.267 -0.009
13 246468_at AT5G17050 UGT78D2, UDP-glucosyl transferase 78D2 0.261 -0.084
14 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 0.250 -0.105
15 248337_at AT5G52310 COR78, COLD REGULATED 78, LTI140, LTI78, LOW-TEMPERATURE-INDUCED 78, RD29A, RESPONSIVE TO DESSICATION 29A 0.232 0.037
16 257237_at AT3G14890 [phosphoesterase] 0.231 -0.036
17 253841_at AT4G27830 AtBGLU10, BGLU10, beta glucosidase 10 0.221 0.007
18 261651_at AT1G27760 ATSAT32, SALT-TOLERANCE 32, SAT32, SALT-TOLERANCE 32 0.220 -0.052
19 250151_at AT5G14570 ATNRT2.7, high affinity nitrate transporter 2.7, NRT2.7, high affinity nitrate transporter 2.7 0.219 -0.030
20 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 0.212 -0.035
21 245200_at AT1G67850 unknown 0.206 -0.012
22 253252_at AT4G34740 ASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATASE2, GLN phosphoribosyl pyrophosphate amidotransferase 2, ATPURF2, CIA1, CHLOROPLAST IMPORT APPARATUS 1, DOV1, DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS 0.204 -0.076
23 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.196 -0.029
24 249038_at AT5G44280 ATRING1A, ARABIDOPSIS THALIANA RING 1A, RING1A, RING 1A 0.186 0.021
25 262881_at AT1G64890 [Major facilitator superfamily protein] 0.186 0.063
26 263221_at AT1G30620 HSR8, HIGH SUGAR RESPONSE8, MUR4, MURUS 4, UXE1, UDP-D-XYLOSE 4-EPIMERASE 1 0.181 -0.013
27 257517_at AT3G16330 unknown 0.178 -0.018
28 261818_at AT1G11390 [Protein kinase superfamily protein] 0.178 0.000
29 265290_at AT2G22590 [UDP-Glycosyltransferase superfamily protein] 0.175 0.013
30 249011_at AT5G44670 GALS2, galactan synthase 2 0.175 0.021
31 247025_at AT5G67030 ABA1, ABA DEFICIENT 1, ATABA1, ARABIDOPSIS THALIANA ABA DEFICIENT 1, ATZEP, ARABIDOPSIS THALIANA ZEAXANTHIN EPOXIDASE, IBS3, IMPAIRED IN BABA-INDUCED STERILITY 3, LOS6, LOW EXPRESSION OF OSMOTIC STRESS-RESPONSIVE GENES 6, NPQ2, NON-PHOTOCHEMICAL QUENCHING 2, ZEP, ZEAXANTHIN EPOXIDASE 0.171 -0.018
32 252956_at AT4G38580 ATFP6, farnesylated protein 6, FP6, farnesylated protein 6, HIPP26, HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 0.169 0.039
33 249148_at AT5G43260 [chaperone protein dnaJ-related] 0.166 -0.029
34 261116_at AT1G75370 [Sec14p-like phosphatidylinositol transfer family protein] 0.162 0.024
35 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 -0.736 -0.001
36 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.481 0.117
37 259104_at AT3G02170 LNG2, LONGIFOLIA2, TRM1, TON1 Recruiting Motif 1 -0.465 0.073
38 260431_at AT1G68190 BBX27, B-box domain protein 27 -0.422 0.119
39 263106_at AT2G05160 [CCCH-type zinc fingerfamily protein with RNA-binding domain] -0.409 0.016
40 266899_at AT2G34620 [Mitochondrial transcription termination factor family protein] -0.407 0.012
41 252433_at AT3G47560 [alpha/beta-Hydrolases superfamily protein] -0.354 0.017
42 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] -0.344 0.174
43 257615_at AT3G26510 [Octicosapeptide/Phox/Bem1p family protein] -0.342 0.084
44 266106_at AT2G45170 ATATG8E, AUTOPHAGY 8E, ATG8E, AUTOPHAGY 8E -0.313 0.121
45 260317_at AT1G63800 UBC5, ubiquitin-conjugating enzyme 5 -0.296 0.060
46 252972_at AT4G38840 SAUR14, SMALL AUXIN UPREGULATED RNA 14 -0.282 -0.017
47 265342_at AT2G18300 HBI1, HOMOLOG OF BEE2 INTERACTING WITH IBH 1 -0.275 0.095
48 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] -0.270 0.181
49 256914_at AT3G23880 [F-box and associated interaction domains-containing protein] -0.248 0.133
50 266873_at AT2G44740 CYCP4;1, cyclin p4;1 -0.237 0.133
51 266265_at AT2G29340 [NAD-dependent epimerase/dehydratase family protein] -0.225 0.126
52 261294_at AT1G48430 [Dihydroxyacetone kinase] -0.211 0.049
53 255088_at AT4G09350 CRRJ, CHLORORESPIRATORY REDUCTION J, DJC75, DNA J protein C75, NdhT, NADH dehydrogenase-like complex T -0.209 -0.186
54 248398_at AT5G51970 [GroES-like zinc-binding alcohol dehydrogenase family protein] -0.205 0.030
55 259017_at AT3G07310 unknown -0.205 0.070
56 257772_at AT3G23080 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.204 0.085
57 263118_at AT1G03090 MCCA -0.203 0.069
58 246114_at AT5G20250 DIN10, DARK INDUCIBLE 10, RS6, raffinose synthase 6 -0.201 0.130
59 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.196 -0.151
60 246487_at AT5G16030 unknown -0.192 0.022
61 251402_at AT3G60290 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.191 0.044
62 248795_at AT5G47390 MYBH, MYB hypocotyl elongation-related -0.189 0.057
63 256455_at AT1G75190 unknown -0.188 0.099
64 245362_at AT4G17460 HAT1, JAB, JAIBA -0.187 0.131
65 247284_at AT5G64410 ATOPT4, ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 4, OPT4, oligopeptide transporter 4 -0.187 0.124
66 257745_at AT3G29240 unknown -0.186 0.036
67 258935_at AT3G10120 unknown -0.184 -0.070