4.0:Information of module
Octopus mutant DYG25
In comparison with dorn1-1 Root MES buffer 30 min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 7.577e-47
GO:0009451 RNA modification BP 4.014e-41
GO:0006412 translation BP 4.533e-36
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0030001 metal ion transport BP 1.125e-14
GO:0000041 transition metal ion transport BP 9.007e-13
GO:1902578 single-organism localization BP 3.258e-12
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Octopus mutant DYG25		 Log2 signal ratio
dorn1-1 Root MES buffer 30 min
1 253502_at AT4G31940 CYP82C4, cytochrome P450, family 82, subfamily C, polypeptide 4 0.910 0.006
2 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.792 -0.006
3 264341_at AT1G70270 unknown 0.725 -0.061
4 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.546 -0.049
5 266719_at AT2G46830 AtCCA1, CCA1, circadian clock associated 1 0.433 -0.115
6 254090_at AT4G25010 AtSWEET14, SWEET14 0.403 0.036
7 264734_at AT1G62280 SLAH1, SLAC1 homologue 1 0.395 0.263
8 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.390 -0.023
9 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.372 -0.027
10 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] 0.355 0.047
11 254043_at AT4G25990 CIL 0.354 0.026
12 258063_at AT3G14620 CYP72A8, cytochrome P450, family 72, subfamily A, polypeptide 8 0.341 -0.114
13 252316_at AT3G48700 ATCXE13, carboxyesterase 13, CXE13, carboxyesterase 13 0.335 0.004
14 258338_at AT3G16150 ASPGB1, asparaginase B1 0.314 -0.024
15 245528_at AT4G15530 PPDK, pyruvate orthophosphate dikinase 0.307 -0.014
16 253911_at AT4G27300 [S-locus lectin protein kinase family protein] 0.301 -0.050
17 263232_at AT1G05700 [Leucine-rich repeat transmembrane protein kinase protein] 0.277 0.028
18 260419_at AT1G69730 [Wall-associated kinase family protein] 0.256 0.018
19 248759_at AT5G47610 [RING/U-box superfamily protein] 0.254 -0.104
20 245076_at AT2G23170 GH3.3 0.252 -0.021
21 262098_at AT1G56170 ATHAP5B, HAP5B, NF-YC2, nuclear factor Y, subunit C2 0.241 0.005
22 249010_at AT5G44580 unknown 0.240 0.018
23 256661_at AT3G11964 RRP5, Ribosomal RNA Processing 5 0.239 0.043
24 247591_at AT5G60770 ATNRT2.4, ARABIDOPSIS THALIANA NITRATE TRANSPORTER 2.4, NRT2.4, nitrate transporter 2.4 0.232 -0.004
25 262624_at AT1G06450 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] 0.230 0.032
26 245784_at AT1G32190 [alpha/beta-Hydrolases superfamily protein] 0.222 -0.006
27 265766_at AT2G48080 [oxidoreductase, 2OG-Fe(II) oxygenase family protein] 0.219 0.086
28 263039_at AT1G23280 [MAK16 protein-related] 0.207 0.015
29 258316_at AT3G22660 [rRNA processing protein-related] 0.204 0.037
30 251833_at AT3G55160 unknown 0.203 0.137
31 259972_at AT1G76420 ANAC031, Arabidopsis NAC domain containing protein 31, CUC3, CUP SHAPED COTYLEDON3, NAC368 0.203 0.012
32 259672_at AT1G68990 MGP3, male gametophyte defective 3 0.201 0.086
33 266391_at AT2G41290 SSL2, strictosidine synthase-like 2 0.200 -0.055
34 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 0.196 0.049
35 250304_at AT5G12110 [Glutathione S-transferase, C-terminal-like] 0.194 0.060
36 251281_at AT3G61640 AGP20, arabinogalactan protein 20, AtAGP20, Arabinogalactan protein 20 0.190 0.072
37 262577_at AT1G15290 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.180 -0.053
38 256799_at AT3G18560 unknown 0.177 0.002
39 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 0.170 0.044
40 261333_at AT1G44910 ATPRP40A, pre-mRNA-processing protein 40A, PRP40A, pre-mRNA-processing protein 40A 0.170 0.001
41 267530_at AT2G41890 [curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein] 0.168 0.045
42 267174_at AT2G37600 [Ribosomal protein L36e family protein] 0.167 0.049
43 251503_at AT3G59140 ABCC10, ATP-binding cassette C10, ATMRP14, multidrug resistance-associated protein 14, MRP14, multidrug resistance-associated protein 14 0.165 0.093
44 259961_at AT1G53700 PK3AT, PROTEIN KINASE 3 ARABIDOPSIS THALIANA, WAG1, WAG 1 0.165 -0.032
45 262594_at AT1G15250 [Zinc-binding ribosomal protein family protein] 0.164 0.065
46 258910_at AT3G06480 [DEAD box RNA helicase family protein] 0.164 -0.072
47 263433_at AT2G22240 ATIPS2, INOSITOL 3-PHOSPHATE SYNTHASE 2, ATMIPS2, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2, MIPS2, myo-inositol-1-phosphate synthase 2 0.163 0.015
48 247739_at AT5G59240 [Ribosomal protein S8e family protein] 0.162 0.134
49 266283_at AT2G29210 [splicing factor PWI domain-containing protein] 0.161 -0.027
50 249261_at AT5G41710 [Mutator-like transposase family, has a 6.2e-18 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] 0.161 -0.015
51 251123_at AT5G01030 unknown 0.160 -0.079
52 265649_at AT2G27510 ATFD3, ferredoxin 3, FD3, ferredoxin 3 0.160 0.006
53 247268_at AT5G64080 AtXYP1, XYP1, xylogen protein 1 0.159 0.058
54 266516_at AT2G47880 [Glutaredoxin family protein] 0.158 -0.026
55 267008_at AT2G39350 ABCG1, ATP-binding cassette G1 0.158 -0.032
56 260623_at AT1G08090 ACH1, ATNRT2.1, NITRATE TRANSPORTER 2.1, ATNRT2:1, nitrate transporter 2:1, LIN1, LATERAL ROOT INITIATION 1, NRT2, NITRATE TRANSPORTER 2, NRT2.1, NITRATE TRANSPORTER 2.1, NRT2:1, nitrate transporter 2:1, NRT2;1AT 0.158 -0.313
57 258576_at AT3G04230 [Ribosomal protein S5 domain 2-like superfamily protein] 0.156 0.079
58 259248_at AT3G07770 AtHsp90-6, HEAT SHOCK PROTEIN 90-6, AtHsp90.6, HEAT SHOCK PROTEIN 90.6, Hsp89.1, HEAT SHOCK PROTEIN 89.1 0.155 0.059
59 247575_at AT5G61030 GR-RBP3, glycine-rich RNA-binding protein 3 0.155 0.083
60 247603_at AT5G60930 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.153 0.064
61 265683_at AT2G24400 SAUR38, SMALL AUXIN UPREGULATED RNA 38 0.153 0.028
62 245848_at AT5G13480 FY 0.152 0.018
63 249011_at AT5G44670 GALS2, galactan synthase 2 0.151 0.041
64 254152_at AT4G24410 unknown 0.148 0.053
65 255562_at AT4G02070 ATMSH6, ARABIDOPSIS THALIANA MUTS HOMOLOG 6, MSH6, MUTS homolog 6, MSH6-1, MUTS HOMOLOG 6-1 0.148 0.036
66 255194_at AT4G07410 PCN, POPCORN 0.146 -0.022
67 246085_at AT5G20540 ATBRXL4, BREVIS RADIX-like 4, BRX-LIKE4, BRXL4, BREVIS RADIX-like 4 0.146 0.056
68 263973_at AT2G42740 RPL16A, ribosomal protein large subunit 16A 0.145 0.052
69 247168_at AT5G65860 [ankyrin repeat family protein] 0.144 0.080
70 251228_at AT3G62710 [Glycosyl hydrolase family protein] 0.144 -0.049
71 247758_at AT5G59120 ATSBT4.13, subtilase 4.13, SBT4.13, subtilase 4.13 0.144 0.021
72 248071_at AT5G55670 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.143 0.007
73 247497_at AT5G61770 PPAN, PETER PAN-like protein 0.142 0.004
74 258034_at AT3G21300 [RNA methyltransferase family protein] 0.142 0.114
75 249475_at AT5G38890 [Nucleic acid-binding, OB-fold-like protein] 0.142 0.069
76 249430_at AT5G39900 [Small GTP-binding protein] 0.140 0.094
77 264803_at AT1G08580 unknown 0.139 0.036
78 261108_at AT1G62960 ACS10, ACC synthase 10 0.139 0.024
79 251197_at AT3G62960 [Thioredoxin superfamily protein] 0.138 0.005
80 245704_at AT5G04290 KTF1, kow domain-containing transcription factor 1, SPT5L, SPT5-LIKE 0.137 -0.091
81 261985_at AT1G33750 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] 0.137 -0.046
82 259228_at AT3G07720 [Galactose oxidase/kelch repeat superfamily protein] 0.136 -0.003
83 246527_at AT5G15750 [Alpha-L RNA-binding motif/Ribosomal protein S4 family protein] 0.136 0.063
84 253560_at AT4G31160 DCAF1, DDB1-CUL4 associated factor 1 0.135 -0.043
85 261653_at AT1G01900 ATSBT1.1, SBTI1.1 0.134 0.070
86 262124_at AT1G59660 [Nucleoporin autopeptidase] 0.133 -0.051
87 262180_at AT1G78050 PGM, phosphoglycerate/bisphosphoglycerate mutase 0.133 0.059
88 252412_at AT3G47295 unknown 0.132 0.067
89 249850_at AT5G23240 DJC76, DNA J protein C76 -0.898 -0.046
90 260668_at AT1G19530 unknown -0.816 -0.045
91 249174_at AT5G42900 COR27, cold regulated gene 27 -0.737 -0.019
92 256060_at AT1G07050 [CCT motif family protein] -0.713 -0.011
93 256602_at AT3G28310 unknown -0.517 0.074
94 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 -0.467 -0.013
95 267036_at AT2G38465 unknown -0.422 -0.006
96 256631_at AT3G28320 unknown -0.415 0.019
97 258227_at AT3G15620 UVR3, UV REPAIR DEFECTIVE 3 -0.404 0.012
98 259282_at AT3G11430 ATGPAT5, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5, GPAT5, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5 -0.379 -0.108
99 256128_at AT1G18140 ATLAC1, LAC1, laccase 1 -0.358 0.211
100 250576_at AT5G08250 [Cytochrome P450 superfamily protein] -0.354 -0.083
101 260035_at AT1G68850 [Peroxidase superfamily protein] -0.352 -0.167
102 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.348 -0.057
103 248744_at AT5G48250 BBX8, B-box domain protein 8 -0.347 0.002
104 261956_at AT1G64590 [NAD(P)-binding Rossmann-fold superfamily protein] -0.343 -0.180
105 263320_at AT2G47180 AtGolS1, galactinol synthase 1, GolS1, galactinol synthase 1 -0.331 -0.043
106 259789_at AT1G29395 COR413-TM1, COLD REGULATED 314 THYLAKOID MEMBRANE 1, COR413IM1, COLD REGULATED 314 INNER MEMBRANE 1, COR414-TM1, cold regulated 414 thylakoid membrane 1 -0.319 0.305
107 255814_at AT1G19900 [glyoxal oxidase-related protein] -0.315 0.266
108 255331_at AT4G04330 AtRbcX1, RbcX1, homologue of cyanobacterial RbcX 1 -0.313 -0.010
109 266330_at AT2G01530 MLP329, MLP-like protein 329, ZCE2, (Zusammen-CA)-enhanced 2 -0.309 -0.090
110 256221_at AT1G56300 [Chaperone DnaJ-domain superfamily protein] -0.298 0.026
111 249128_at AT5G43440 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.294 0.049
112 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.294 0.055
113 250649_at AT5G06690 WCRKC1, WCRKC thioredoxin 1 -0.290 0.066
114 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] -0.289 -0.057
115 266708_at AT2G03200 [Eukaryotic aspartyl protease family protein] -0.287 -0.116
116 253421_at AT4G32340 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.286 0.118
117 249234_at AT5G42200 [RING/U-box superfamily protein] -0.284 -0.106
118 246395_at AT1G58170 [Disease resistance-responsive (dirigent-like protein) family protein] -0.277 -0.014
119 264045_at AT2G22450 AtRIBA2, RIBA2, homolog of ribA 2 -0.269 0.015
120 267119_at AT2G32610 ATCSLB01, cellulose synthase-like B1, ATCSLB1, CELLULOSE SYNTHASE LIKE B1, CSLB01, CELLULOSE SYNTHASE LIKE B1, CSLB01, cellulose synthase-like B1 -0.267 -0.084
121 266353_at AT2G01520 MLP328, MLP-like protein 328, ZCE1, (Zusammen-CA)-enhanced 1 -0.267 -0.122
122 249545_at AT5G38030 [MATE efflux family protein] -0.264 -0.114
123 261157_at AT1G34510 [Peroxidase superfamily protein] -0.262 -0.264
124 259036_at AT3G09220 LAC7, laccase 7 -0.261 0.008
125 255607_at AT4G01130 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.260 -0.014
126 263384_at AT2G40130 SMXL8, SMAX1-like 8 -0.259 -0.051
127 250230_at AT5G13900 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.253 -0.083
128 245412_at AT4G17280 [Auxin-responsive family protein] -0.248 0.062
129 262199_at AT1G53800 unknown -0.246 -0.035
130 254474_at AT4G20390 [Uncharacterised protein family (UPF0497)] -0.246 -0.037
131 251494_at AT3G59350 [Protein kinase superfamily protein] -0.244 -0.016
132 267265_at AT2G22980 SCPL13, serine carboxypeptidase-like 13 -0.243 0.094
133 264643_at AT1G08990 GUX5, Glucuronic Acid Substitution of Xylan 5, PGSIP5, plant glycogenin-like starch initiation protein 5 -0.242 -0.121
134 267505_at AT2G45560 CYP76C1, cytochrome P450, family 76, subfamily C, polypeptide 1 -0.242 -0.028
135 253309_at AT4G33790 CER4, ECERIFERUM 4, FAR3, FATTY ACID REDUCTASE 3, G7 -0.240 0.189
136 258905_at AT3G06390 [Uncharacterised protein family (UPF0497)] -0.239 -0.127
137 257512_at AT1G35250 ALT2, acyl-lipid thioesterase 2 -0.235 -0.038
138 267457_at AT2G33790 AGP30, arabinogalactan protein 30, ATAGP30 -0.235 0.063
139 252537_at AT3G45710 [Major facilitator superfamily protein] -0.234 -0.043
140 249377_at AT5G40690 unknown -0.230 -0.016
141 265471_at AT2G37130 [Peroxidase superfamily protein] -0.230 -0.058
142 253292_at AT4G33985 unknown -0.228 -0.031
143 266526_at AT2G16980 [Major facilitator superfamily protein] -0.224 0.044
144 245148_at AT2G45220 PME17, pectin methylesterase 17 -0.223 -0.049
145 254764_at AT4G13250 NYC1, NON-YELLOW COLORING 1 -0.221 0.029
146 264716_at AT1G70170 MMP, matrix metalloproteinase -0.218 -0.064
147 249009_at AT5G44610 MAP18, microtubule-associated protein 18, PCAP2, PLASMA MEMBRANE ASSOCIATED CA2+-BINDING PROTEIN-2 -0.216 -0.050
148 266336_at AT2G32270 ZIP3, zinc transporter 3 precursor -0.215 -0.075
149 247348_at AT5G63810 AtBGAL10, Arabidopsis thaliana beta-galactosidase 10, BGAL10, beta-galactosidase 10 -0.210 0.059
150 249800_at AT5G23660 AtSWEET12, MTN3, homolog of Medicago truncatula MTN3, SWEET12 -0.208 -0.162
151 250412_at AT5G11150 ATVAMP713, vesicle-associated membrane protein 713, VAMP713, VAMP713, vesicle-associated membrane protein 713 -0.208 0.109
152 264405_at AT1G10210 ATMPK1, mitogen-activated protein kinase 1, MPK1, mitogen-activated protein kinase 1 -0.205 -0.094
153 262317_at AT2G48140 EDA4, embryo sac development arrest 4 -0.203 -0.087
154 247525_at AT5G61380 APRR1, AtTOC1, TIMING OF CAB EXPRESSION 1, PRR1, PSEUDO-RESPONSE REGULATOR 1, TOC1, TIMING OF CAB EXPRESSION 1 -0.202 -0.044
155 265539_at AT2G15830 unknown -0.200 -0.096
156 248138_at AT5G54960 PDC2, pyruvate decarboxylase-2 -0.194 -0.083
157 256217_at AT1G56320 unknown -0.193 -0.080
158 259374_at AT3G16280 [Integrase-type DNA-binding superfamily protein] -0.191 0.015
159 266225_at AT2G28900 ATOEP16-1, outer plastid envelope protein 16-1, ATOEP16-L, OUTER PLASTID ENVELOPE PROTEIN 16-L, OEP16, outer envelope protein 16, OEP16-1, outer plastid envelope protein 16-1 -0.191 -0.008
160 266712_at AT2G46750 AtGulLO2, GulLO2, L -gulono-1,4-lactone ( L -GulL) oxidase 2 -0.190 -0.060
161 262947_at AT1G75750 GASA1, GAST1 protein homolog 1 -0.189 0.062
162 261586_at AT1G01640 [BTB/POZ domain-containing protein] -0.189 -0.053
163 251297_at AT3G62020 GLP10, germin-like protein 10 -0.189 -0.133
164 245181_at AT5G12420 [O-acyltransferase (WSD1-like) family protein] -0.186 -0.074
165 261318_at AT1G53035 unknown -0.184 0.022
166 248178_at AT5G54370 [Late embryogenesis abundant (LEA) protein-related] -0.183 -0.054
167 255266_at AT4G05200 CRK25, cysteine-rich RLK (RECEPTOR-like protein kinase) 25 -0.183 -0.027
168 260636_at AT1G62430 ATCDS1, CDP-diacylglycerol synthase 1, CDS1, CDP-diacylglycerol synthase 1 -0.182 0.021
169 264799_at AT1G08550 AVDE1, ARABIDOPSIS VIOLAXANTHIN DE-EPOXIDASE 1, NPQ1, non-photochemical quenching 1 -0.180 0.008
170 251130_at AT5G01180 AtNPF8.2, ATPTR5, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 5, NPF8.2, NRT1/ PTR family 8.2, PTR5, peptide transporter 5 -0.179 0.048
171 262309_at AT1G70820 [phosphoglucomutase, putative / glucose phosphomutase, putative] -0.178 -0.026
172 260773_at AT1G78440 ATGA2OX1, Arabidopsis thaliana gibberellin 2-oxidase 1, GA2OX1, gibberellin 2-oxidase 1 -0.178 -0.039
173 249113_at AT5G43790 [Pentatricopeptide repeat (PPR) superfamily protein] -0.177 0.064
174 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 -0.177 -0.132
175 245735_at AT1G73410 ATMYB54, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 54, MYB54, myb domain protein 54 -0.176 -0.104