4.0:Information of module
aba2 1% sucrose 12-day-old
In comparison with nar1-4/- help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001101 response to acid chemical BP 8.671e-07
GO:0009725 response to hormone BP 1.063e-06
GO:1901700 response to oxygen-containing compound BP 1.330e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042538 hyperosmotic salinity response BP 2.196e-05
GO:0071215 cellular response to abscisic acid stimu... BP 8.237e-05
GO:0009738 abscisic acid-activated signaling pathwa... BP 1.623e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
aba2 1% sucrose 12-day-old		 Log2 signal ratio
nar1-4/-
1 264872_at AT1G24260 AGL9, AGAMOUS-like 9, SEP3, SEPALLATA3 0.770 0.111
2 248371_at AT5G51810 AT2353, ATGA20OX2, GA20OX2, gibberellin 20 oxidase 2 0.473 0.122
3 266658_at AT2G25735 unknown 0.448 0.238
4 265327_at AT2G18210 unknown 0.384 0.065
5 257536_at AT3G02800 AtPFA-DSP3, PFA-DSP3, plant and fungi atypical dual-specificity phosphatase 3 0.375 -0.013
6 259211_at AT3G09020 [alpha 1,4-glycosyltransferase family protein] 0.336 0.041
7 259372_at AT1G69120 AGL7, AGAMOUS-like 7, AP1, APETALA1, AtAP1 0.311 -0.081
8 267254_at AT2G23030 SNRK2-9, SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-9, SNRK2.9, SNF1-related protein kinase 2.9 0.309 -0.038
9 246018_at AT5G10695 unknown 0.247 0.003
10 248528_at AT5G50760 SAUR55, SMALL AUXIN UPREGULATED RNA 55 0.243 -0.079
11 264202_at AT1G22810 [Integrase-type DNA-binding superfamily protein] 0.228 0.009
12 247753_at AT5G59070 [UDP-Glycosyltransferase superfamily protein] 0.222 0.023
13 265740_at AT2G01150 RHA2B, RING-H2 finger protein 2B 0.220 -0.008
14 246532_at AT5G15870 [glycosyl hydrolase family 81 protein] 0.214 -0.042
15 250107_at AT5G15330 ATSPX4, ARABIDOPSIS THALIANA SPX DOMAIN GENE 4, SPX4, SPX domain gene 4 0.194 0.063
16 251012_at AT5G02580 unknown 0.190 0.043
17 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.188 0.051
18 261506_at AT1G71697 ATCK1, choline kinase 1, CK, CHOLINE KINASE, CK1, choline kinase 1 0.184 0.039
19 253696_at AT4G29740 ATCKX4, CKX4, cytokinin oxidase 4 0.182 -0.023
20 254921_at AT4G11300 unknown 0.176 0.034
21 258194_at AT3G29170 unknown 0.172 0.047
22 259137_at AT3G10300 [Calcium-binding EF-hand family protein] 0.168 0.007
23 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] 0.168 0.137
24 245768_at AT1G33590 [Leucine-rich repeat (LRR) family protein] 0.168 0.062
25 254571_at AT4G19370 unknown 0.164 0.008
26 265955_at AT2G37280 ABCG33, ATP-binding cassette G33, ATPDR5, PLEIOTROPIC DRUG RESISTANCE 5, PDR5, pleiotropic drug resistance 5 0.163 0.036
27 247043_at AT5G66880 SNRK2-3, SUCROSE NONFERMENTING 1 (SNF1)-RELATED PROTEIN KINASE 2-3, SNRK2.3, sucrose nonfermenting 1(SNF1)-related protein kinase 2.3, SRK2I 0.162 -0.011
28 259312_at AT3G05200 ATL6, Arabidopsis toxicos en levadura 6 0.162 0.057
29 256818_at AT3G21420 LBO1, LATERAL BRANCHING OXIDOREDUCTASE 1 0.162 -0.073
30 254232_at AT4G23600 CORI3, CORONATINE INDUCED 1, JR2, JASMONIC ACID RESPONSIVE 2 -0.906 -0.159
31 262050_at AT1G80130 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.601 -0.068
32 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 -0.550 -0.344
33 266989_at AT2G39330 JAL23, jacalin-related lectin 23 -0.530 -0.187
34 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 -0.422 -0.212
35 252618_at AT3G45140 ATLOX2, ARABIODOPSIS THALIANA LIPOXYGENASE 2, LOX2, lipoxygenase 2 -0.395 -0.026
36 266965_at AT2G39510 UMAMIT14, Usually multiple acids move in and out Transporters 14 -0.388 -0.111
37 256598_at AT3G30180 BR6OX2, brassinosteroid-6-oxidase 2, CYP85A2 -0.352 -0.038
38 262357_at AT1G73040 [Mannose-binding lectin superfamily protein] -0.350 0.092
39 260357_at AT1G69260 AFP1, ABI five binding protein -0.333 -0.099
40 260353_at AT1G69230 SP1L2, SPIRAL1-like2 -0.300 -0.327
41 266327_at AT2G46680 ATHB-7, homeobox 7, ATHB7, ARABIDOPSIS THALIANA HOMEOBOX 7, HB-7, homeobox 7 -0.268 -0.109
42 267569_at AT2G30790 PSBP-2, photosystem II subunit P-2 -0.254 -0.072
43 248006_at AT5G56250 HAP8, HAPLESS 8 -0.236 -0.041
44 250002_at AT5G18690 AGP25, arabinogalactan protein 25, ATAGP25, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEINS 25 -0.211 0.000
45 246260_at AT1G31820 PUT1, POLYAMINE UPTAKE TRANSPORTER 1 -0.203 0.127
46 264696_at AT1G70230 AXY4, ALTERED XYLOGLUCAN 4, TBL27, TRICHOME BIREFRINGENCE-LIKE 27 -0.191 -0.000
47 267423_at AT2G35060 KUP11, K+ uptake permease 11 -0.186 -0.013
48 254413_at AT4G21440 ATM4, A. THALIANA MYB 4, ATMYB102, MYB-like 102, MYB102, MYB102, MYB-like 102 -0.180 -0.020
49 262154_at AT1G52700 [alpha/beta-Hydrolases superfamily protein] -0.172 0.043
50 265350_at AT2G22620 [Rhamnogalacturonate lyase family protein] -0.167 -0.083
51 260144_at AT1G71960 ABCG25, ATP-binding casette G25, ATABCG25, Arabidopsis thaliana ATP-binding cassette G25 -0.165 -0.032
52 264054_at AT2G22540 AGL22, AGAMOUS-like 22, FAQ1, Flowering Arabidopsis QTL1, SVP, SHORT VEGETATIVE PHASE -0.143 -0.018
53 245127_at AT2G47600 ATMHX, magnesium/proton exchanger, ATMHX1, MHX, magnesium/proton exchanger, MHX1, MAGNESIUM/PROTON EXCHANGER 1 -0.142 -0.037
54 259334_at AT3G03790 [ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein] -0.141 -0.020
55 254894_at AT4G11840 PLDGAMMA3, phospholipase D gamma 3 -0.139 0.017
56 245011_at ATCG00430 PSBG, photosystem II reaction center protein G -0.139 -0.012
57 245352_at AT4G15490 UGT84A3 -0.136 -0.008