4.0:Information of module
myb5 mutant seed
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006354 DNA-templated transcription, elongation BP 2.220e-03
GO:0015979 photosynthesis BP 8.520e-03
GO:0006270 DNA replication initiation BP 9.861e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016192 vesicle-mediated transport BP 6.755e-03
GO:0009957 epidermal cell fate specification BP 1.072e-02
GO:0009068 aspartate family amino acid catabolic pr... BP 1.256e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
myb5 mutant seed		 Log2 signal ratio
bri1-116
1 263281_at AT2G14160 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.639 -0.127
2 259737_at AT1G64400 LACS3, long-chain acyl-CoA synthetase 3 0.465 0.013
3 267123_at AT2G23560 ATMES7, ARABIDOPSIS THALIANA METHYL ESTERASE 7, MES7, methyl esterase 7 0.350 -0.133
4 256094_at AT1G20780 ATPUB44, ARABIDOPSIS THALIANA PLANT U-BOX 44, PUB44, PLANT U-BOX 44, SAUL1, senescence-associated E3 ubiquitin ligase 1 0.237 -0.033
5 266154_at AT2G12190 [Cytochrome P450 superfamily protein] 0.210 0.109
6 245049_at ATCG00050 RPS16, ribosomal protein S16 0.197 0.186
7 264835_at AT1G03550 AtSCAMP4, SCAMP4, Secretory carrier membrane protein 4 0.171 -0.010
8 263222_at AT1G30640 [Protein kinase family protein] 0.164 -0.184
9 255419_at AT4G03230 [S-locus lectin protein kinase family protein] 0.155 -0.025
10 259235_at AT3G11600 unknown 0.150 -0.013
11 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 0.142 0.206
12 255893_at AT1G17960 [Threonyl-tRNA synthetase] 0.138 -0.240
13 244960_at ATCG01020 RPL32, ribosomal protein L32 0.136 0.058
14 255148_at AT4G08470 MAPKKK10, MEKK3, MAPK/ERK kinase kinase 3 0.136 0.020
15 256337_at AT1G72060 [serine-type endopeptidase inhibitors] 0.135 0.006
16 244985_at ATCG00810 RPL22, ribosomal protein L22 0.133 -0.092
17 257300_at AT3G28080 UMAMIT47, Usually multiple acids move in and out Transporters 47 0.132 0.142
18 251843_x_at AT3G54590 ATHRGP1, hydroxyproline-rich glycoprotein, HRGP1, hydroxyproline-rich glycoprotein 0.130 0.031
19 267148_at AT2G23470 RUS4, ROOT UV-B SENSITIVE 4 0.129 0.047
20 253583_at AT4G30680 [Initiation factor eIF-4 gamma, MA3] 0.127 0.165
21 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b 0.126 -0.070
22 259194_at AT3G01540 ATDRH1, ARABIDOPSIS THALIANA DEAD BOX RNA HELICASE 1, DRH1, DEAD box RNA helicase 1 0.125 -0.014
23 244980_at ATCG00760 RPL36, ribosomal protein L36 0.124 0.081
24 255956_at AT1G22015 DD46 0.123 0.088
25 249450_at AT5G39440 SnRK1.3, SNF1-related protein kinase 1.3 0.118 -0.089
26 256352_at AT1G54970 ATPRP1, proline-rich protein 1, PRP1, proline-rich protein 1, RHS7, ROOT HAIR SPECIFIC 7 0.117 -0.086
27 244970_at ATCG00660 RPL20, ribosomal protein L20 0.115 -0.028
28 249606_at AT5G37260 CIR1, CIRCADIAN 1, RVE2, REVEILLE 2 0.115 -0.093
29 252011_at AT3G52720 ACA1, alpha carbonic anhydrase 1, ATACA1, A. THALIANA ALPHA CARBONIC ANHYDRASE 1, CAH1, CARBONIC ANHYDRASE 1 0.113 -0.131
30 262097_at AT1G55990 [glycine-rich protein] 0.113 0.047
31 245934_at AT5G09330 ANAC082, NAC domain containing protein 82, NAC082, NAC domain containing protein 82, VNI1, VND-interacting 1 0.113 0.023
32 267496_at AT2G30550 DALL3, DAD1-Like Lipase 3 0.112 -0.170
33 244984_at ATCG00800 [RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3)] 0.112 -0.147
34 263331_at AT2G15270 unknown 0.112 -0.031
35 257651_at AT3G16850 [Pectin lyase-like superfamily protein] 0.110 -0.126
36 254371_at AT4G21760 BGLU47, beta-glucosidase 47 0.110 0.048
37 246734_at AT5G27680 RECQSIM, RECQ helicase SIM 0.110 -0.007
38 244982_at ATCG00780 RPL14, ribosomal protein L14 0.108 0.037
39 266446_at AT2G43310 [Ribosomal L18p/L5e family protein] 0.107 0.153
40 252735_at AT3G43170 unknown 0.105 0.015
41 266793_at AT2G03060 AGL30, AGAMOUS-like 30 0.105 -0.031
42 263732_at AT1G59980 ARL2, ARG1-like 2, ATDJC39, GPS4, gravity persistence signal 4 0.105 -0.023
43 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.104 -0.176
44 248327_at AT5G52750 [Heavy metal transport/detoxification superfamily protein ] 0.104 -0.347
45 252009_at AT3G52800 [A20/AN1-like zinc finger family protein] 0.102 -0.080
46 245174_at AT2G47500 [P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain] 0.101 -0.244
47 266785_at AT2G28970 [Leucine-rich repeat protein kinase family protein] 0.101 -0.047
48 256602_at AT3G28310 unknown 0.101 0.090
49 245245_at AT1G44318 hemb2 0.101 -0.122
50 260838_at AT1G43680 unknown 0.100 -0.012
51 265252_at AT2G01980 ATNHX7, ARABIDOPSIS NA+/H+ ANTIPORTER 7, ATSOS1, ARABIDOPSIS SALT OVERLY SENSITIVE 1, SOS1, SALT OVERLY SENSITIVE 1 0.100 -0.108
52 263791_at AT2G24520 AHA5, H(+)-ATPase 5, HA5, H(+)-ATPase 5 0.099 0.153
53 253035_at AT4G38240 CGL, COMPLEX GLYCAN LESS, CGL1, COMPLEX GLYCAN LESS 1, GNTI, N-ACETYLGLUCOSAMINYLTRANSFERASE I 0.099 0.033
54 264696_at AT1G70230 AXY4, ALTERED XYLOGLUCAN 4, TBL27, TRICHOME BIREFRINGENCE-LIKE 27 0.099 -0.162
55 252654_at AT3G44740 [Class II aaRS and biotin synthetases superfamily protein] 0.098 0.085
56 246625_at AT1G48880 TBL7, TRICHOME BIREFRINGENCE-LIKE 7 0.098 0.027
57 262652_at AT1G14110 ATFUT9, FUT9, fucosyltransferase 9 0.097 0.044
58 252033_at AT3G51950 [Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein] 0.097 -0.031
59 255522_at AT4G02260 AT-RSH1, RELA-SPOT HOMOLOG 1, ATRSH1, RELA/SPOT HOMOLOG 1, RSH1, RELA/SPOT homolog 1 0.097 0.025
60 258301_at AT3G30510 transposable element gene 0.096 0.151
61 266910_at AT2G45920 [U-box domain-containing protein] 0.096 0.118
62 266252_at AT2G27520 [F-box and associated interaction domains-containing protein] 0.096 0.075
63 249259_at AT5G41660 unknown 0.094 0.034
64 251142_at AT5G01015 unknown 0.094 -0.020
65 267122_at AT2G23550 ABE1, ALPHA/BETA FOLD HYDROLASE/ESTERASE 1, ATMES6, METHYL ESTERASE 6, MES6, methyl esterase 6 -1.336 -0.055
66 256985_at AT3G13540 ATMYB5, myb domain protein 5, MYB5, myb domain protein 5 -1.084 0.023
67 267125_at AT2G23580 ABE4, ALPHA/BETA FOLD HYDROLASE/ESTERASE 4, ATMES4, ARABIDOPSIS THALIANA METHYL ESTERASE 4, MES4, methyl esterase 4 -0.547 0.061
68 252050_at AT3G52550 unknown -0.484 0.034
69 259751_at AT1G71030 ATMYBL2, ARABIDOPSIS MYB-LIKE 2, MYBL2, MYB-like 2 -0.423 0.176
70 257644_at AT3G25780 AOC3, allene oxide cyclase 3 -0.221 -0.273
71 266996_at AT2G34490 CYP710A2, cytochrome P450, family 710, subfamily A, polypeptide 2 -0.207 -0.553
72 255904_at AT1G17860 [Kunitz family trypsin and protease inhibitor protein] -0.199 -0.127
73 245302_at AT4G17695 KAN3, KANADI 3 -0.196 -0.133
74 248355_at AT5G52340 ATEXO70A2, exocyst subunit exo70 family protein A2, EXO70A2, exocyst subunit exo70 family protein A2 -0.177 0.070
75 265894_at AT2G15050 LTP, lipid transfer protein, LTP7, lipid transfer protein 7 -0.158 0.065
76 262304_at AT1G70890 MLP43, MLP-like protein 43 -0.157 -0.108
77 247085_at AT5G66310 [ATP binding microtubule motor family protein] -0.153 -0.147
78 264490_at AT1G27390 TOM20-2, translocase outer membrane 20-2 -0.149 -0.012
79 253863_at AT4G27420 ABCG9, ATP-binding cassette G9 -0.147 -0.079
80 246145_at AT5G19880 [Peroxidase superfamily protein] -0.137 0.026
81 251718_at AT3G56100 IMK3, MRLK, meristematic receptor-like kinase -0.137 0.011
82 264574_at AT1G05300 ZIP5, zinc transporter 5 precursor -0.134 0.132
83 261017_at AT1G26570 ATUGD1, UDP-GLUCOSE DEHYDROGENASE 1, UGD1, UDP-glucose dehydrogenase 1 -0.131 -0.040
84 249953_at AT5G18960 FRS12, FAR1-related sequence 12 -0.125 0.054
85 256815_at AT3G21380 [Mannose-binding lectin superfamily protein] -0.124 -0.036
86 262434_at AT1G47670 [Transmembrane amino acid transporter family protein] -0.123 -0.007
87 260805_at AT1G78320 ATGSTU23, glutathione S-transferase TAU 23, GSTU23, glutathione S-transferase TAU 23 -0.122 0.172
88 247056_at AT5G66750 ATDDM1, CHA1, CHR01, CHROMATIN REMODELING 1, CHR1, chromatin remodeling 1, DDM1, DECREASED DNA METHYLATION 1, SOM1, SOMNIFEROUS 1, SOM4 -0.117 -0.157
89 251608_at AT3G57860 GIG1, GIGAS CELL 1, OSD1, OMISSION OF SECOND DIVISION, UVI4-LIKE, UV-B-insensitive 4-like -0.117 -0.092
90 249894_at AT5G22580 [Stress responsive A/B Barrel Domain] -0.116 0.345
91 253148_at AT4G35620 CYCB2;2, Cyclin B2;2 -0.113 -0.164
92 256222_at AT1G56210 [Heavy metal transport/detoxification superfamily protein ] -0.113 0.119
93 255832_at AT2G33360 unknown -0.113 0.021
94 260166_at AT1G79840 GL2, GLABRA 2 -0.109 -0.060
95 261670_at AT1G18520 TET11, tetraspanin11 -0.109 0.006
96 250437_at AT5G10430 AGP4, arabinogalactan protein 4, ATAGP4 -0.106 -0.304
97 248131_at AT5G54830 [DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein] -0.105 -0.092
98 250789_at AT5G05630 PUT3, POLYAMINE UPTAKE TRANSPORTER 3, RMV1, resistant to methyl viologen 1 -0.102 0.056
99 247094_at AT5G66280 GMD1, GDP-D-mannose 4,6-dehydratase 1 -0.102 -0.541
100 248456_at AT5G51380 [RNI-like superfamily protein] -0.102 -0.039
101 262494_at AT1G21810 unknown -0.100 0.003
102 260807_at AT1G78310 VQ9, VQ motif-containing protein 9 -0.100 0.069
103 259930_at AT1G34355 ATPS1, PARALLEL SPINDLE 1, PS1, PARALLEL SPINDLE 1 -0.099 0.015
104 247699_at AT5G59840 [Ras-related small GTP-binding family protein] -0.098 -0.021
105 250004_at AT5G18750 [DNAJ heat shock N-terminal domain-containing protein] -0.097 0.033
106 253573_at AT4G31020 [alpha/beta-Hydrolases superfamily protein] -0.094 0.059
107 246445_at AT5G17630 [Nucleotide/sugar transporter family protein] -0.094 0.071
108 252311_at AT3G49370 [Calcium-dependent protein kinase (CDPK) family protein] -0.094 -0.114
109 255732_at AT1G25450 CER60, ECERIFERUM 60, KCS5, 3-ketoacyl-CoA synthase 5 -0.092 -0.091
110 259419_at AT1G06310 ACX6, acyl-CoA oxidase 6 -0.091 0.042
111 252076_at AT3G51660 [Tautomerase/MIF superfamily protein] -0.091 -0.374
112 248401_at AT5G52110 CCB2, COFACTOR ASSEMBLY OF COMPLEX C, HCF208, HIGH CHLOROPHYLL FLUORESCENCE 208 -0.090 0.216
113 251246_at AT3G62100 IAA30, indole-3-acetic acid inducible 30 -0.090 0.046
114 257949_at AT3G21750 UGT71B1, UDP-glucosyl transferase 71B1 -0.090 0.196
115 267146_at AT2G38160 unknown -0.089 0.017
116 246797_at AT5G26790 unknown -0.089 0.121
117 246776_at AT5G27550 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.089 -0.020
118 266020_at AT2G05900 SDG11, SET domain protein 11, SUVH10, SU(VAR)3-9 HOMOLOG 10 -0.088 0.216
119 249230_at AT5G42070 unknown -0.087 0.301
120 256977_at AT3G21040 [copia-like retrotransposon family, has a 5.7e-20 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] -0.086 0.075
121 248705_at AT5G48520 AtAUG3, AUG3, augmin 3 -0.086 -0.029
122 253816_at AT4G28210 EMB1923, embryo defective 1923 -0.085 0.174
123 247451_at AT5G62320 ATMYB99, myb domain protein 99, ATMYBCU15, MYB99, myb domain protein 99 -0.084 0.062
124 259200_at AT3G09070 OPS, OCTOPUS -0.084 -0.104
125 267396_at AT2G44270 ROL5, repressor of lrx1 -0.083 0.085
126 263125_at AT1G78470 unknown -0.083 0.021
127 260646_at AT1G53340 [Cysteine/Histidine-rich C1 domain family protein] -0.082 -0.084