4.0:Information of module
IAA Treated
In comparison with Red Light 45min  help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 3.741e-39
GO:0009725 response to hormone BP 2.636e-22
GO:0009719 response to endogenous stimulus BP 1.329e-21
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009648 photoperiodism BP 1.782e-05
GO:0046488 phosphatidylinositol metabolic process BP 2.664e-05
GO:0048573 photoperiodism, flowering BP 3.358e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
IAA Treated		 Log2 signal ratio
Red Light 45min
1 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 1.066 0.161
2 251565_at AT3G58190 ASL16, ASYMMETRIC LEAVES 2-LIKE 16, LBD29, lateral organ boundaries-domain 29 1.005 0.093
3 265806_at AT2G18010 SAUR10, SMALL AUXIN UPREGULATED RNA 10 0.959 0.353
4 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 0.898 0.007
5 266974_at AT2G39370 MAKR4, MEMBRANE-ASSOCIATED KINASE REGULATOR 4 0.875 -0.096
6 266611_at AT2G14960 GH3.1 0.874 0.015
7 245076_at AT2G23170 GH3.3 0.818 0.068
8 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 0.810 0.115
9 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 0.808 0.406
10 259332_at AT3G03830 SAUR28, SMALL AUXIN UP RNA 28 0.733 0.274
11 259787_at AT1G29460 SAUR65, SMALL AUXIN UPREGULATED RNA 65 0.728 0.248
12 253179_at AT4G35200 unknown 0.712 -0.034
13 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.688 0.256
14 266830_at AT2G22810 ACC4, 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID SYNTHASE POLYPEPTIDE, ACS4, 1-aminocyclopropane-1-carboxylate synthase 4, ATACS4 0.683 -0.009
15 256190_at AT1G30100 ATNCED5, NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5, NCED5, nine-cis-epoxycarotenoid dioxygenase 5 0.647 -0.002
16 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 0.626 0.192
17 253066_at AT4G37770 ACS8, 1-amino-cyclopropane-1-carboxylate synthase 8 0.610 -0.024
18 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.602 0.034
19 257900_at AT3G28420 [Putative membrane lipoprotein] 0.596 -0.003
20 248282_at AT5G52900 MAKR6, MEMBRANE-ASSOCIATED KINASE REGULATOR 6 0.594 0.208
21 256743_at AT3G29370 P1R3, P1R3 0.591 0.073
22 261917_at AT1G65920 [Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain] 0.580 0.095
23 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA 0.558 0.173
24 266832_at AT2G30040 MAPKKK14, mitogen-activated protein kinase kinase kinase 14 0.547 -0.011
25 259773_at AT1G29500 SAUR66, SMALL AUXIN UPREGULATED RNA 66 0.542 0.193
26 259785_at AT1G29490 SAUR68, SMALL AUXIN UPREGULATED 68 0.538 0.145
27 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.529 0.158
28 248801_at AT5G47370 HAT2 0.524 0.117
29 259735_at AT1G64405 unknown 0.523 0.005
30 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 0.506 0.232
31 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 0.499 0.077
32 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 0.494 0.172
33 250509_at AT5G09970 CYP78A7, cytochrome P450, family 78, subfamily A, polypeptide 7 0.493 -0.041
34 258399_at AT3G15540 IAA19, indole-3-acetic acid inducible 19, MSG2, MASSUGU 2 0.492 0.052
35 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 0.489 0.073
36 253908_at AT4G27260 GH3.5, WES1 0.485 0.007
37 253791_at AT4G28640 IAA11, indole-3-acetic acid inducible 11 0.483 0.018
38 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 0.462 -0.031
39 245140_at AT2G45420 LBD18, LOB domain-containing protein 18 0.457 -0.010
40 254685_at AT4G13790 SAUR25, SMALL AUXIN UPREGULATED RNA 25 0.442 0.356
41 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.439 0.164
42 257386_at AT2G42440 ASL15, ASYMMETRIC LEAVES 2-like 15, LBD17, LOB domain-containing protein 17 0.438 -0.003
43 248371_at AT5G51810 AT2353, ATGA20OX2, GA20OX2, gibberellin 20 oxidase 2 0.436 -0.028
44 245696_at AT5G04190 PKS4, phytochrome kinase substrate 4 0.426 0.105
45 253047_at AT4G37295 unknown 0.424 -0.044
46 251246_at AT3G62100 IAA30, indole-3-acetic acid inducible 30 0.419 -0.033
47 263436_at AT2G28690 unknown 0.418 -0.003
48 246798_at AT5G26930 GATA23, GATA transcription factor 23 0.418 0.043
49 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 0.405 0.110
50 265144_at AT1G51170 AGC2-3, AGC2 kinase 3, UCN, UNICORN 0.403 0.026
51 247179_at AT5G65320 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.396 -0.025
52 252204_at AT3G50340 unknown 0.393 0.096
53 259027_at AT3G09280 unknown 0.393 -0.008
54 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.393 0.082
55 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 0.383 0.103
56 252765_at AT3G42800 unknown 0.383 0.189
57 258253_at AT3G26760 [NAD(P)-binding Rossmann-fold superfamily protein] 0.377 -0.009
58 249306_at AT5G41400 [RING/U-box superfamily protein] 0.372 -0.002
59 246401_at AT1G57560 AtMYB50, myb domain protein 50, MYB50, myb domain protein 50 0.372 -0.048
60 247474_at AT5G62280 unknown 0.364 0.096
61 256010_at AT1G19220 ARF11, AUXIN RESPONSE FACTOR11, ARF19, auxin response factor 19, IAA22, indole-3-acetic acid inducible 22 0.362 0.026
62 247869_at AT5G57520 ATZFP2, ZINC FINGER PROTEIN 2, ZFP2, zinc finger protein 2 0.361 -0.018
63 263656_at AT1G04240 IAA3, indole-3-acetic acid inducible 3, SHY2, SHORT HYPOCOTYL 2 0.359 0.034
64 245416_at AT4G17350 unknown 0.359 0.009
65 259845_at AT1G73590 ATPIN1, ARABIDOPSIS THALIANA PIN-FORMED 1, PIN1, PIN-FORMED 1 0.355 -0.028
66 251423_at AT3G60550 CYCP3;2, cyclin p3;2 0.354 0.017
67 266507_at AT2G47860 SETH6 0.352 -0.016
68 263545_at AT2G21560 unknown -0.348 -0.047
69 257679_at AT3G20470 ATGRP-5, ATGRP5, GRP-5, GLYCINE-RICH PROTEIN 5, GRP5, glycine-rich protein 5 -0.255 -0.053
70 257074_at AT3G19660 unknown -0.247 -0.025
71 245776_at AT1G30260 unknown -0.236 -0.009
72 253243_at AT4G34560 unknown -0.226 0.037
73 252081_at AT3G51910 AT-HSFA7A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, HSFA7A, heat shock transcription factor A7A -0.224 0.075
74 247991_at AT5G56320 ATEXP14, ATEXPA14, expansin A14, ATHEXP ALPHA 1.5, EXP14, EXPANSIN 14, EXPA14, expansin A14 -0.223 0.026
75 259976_at AT1G76560 CP12-3, CP12 domain-containing protein 3 -0.220 0.041
76 264470_at AT1G67110 CYP735A2, cytochrome P450, family 735, subfamily A, polypeptide 2 -0.213 -0.068
77 257670_at AT3G20340 unknown -0.208 0.053
78 258178_at AT3G21680 unknown -0.205 -0.015
79 259371_at AT1G69080 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.201 0.019
80 253302_at AT4G33660 unknown -0.198 -0.008
81 247600_at AT5G60890 ATMYB34, ATR1, ALTERED TRYPTOPHAN REGULATION 1, MYB34, myb domain protein 34 -0.197 0.025
82 254193_at AT4G23870 unknown -0.197 0.012
83 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] -0.196 -0.003
84 252250_at AT3G49790 [Carbohydrate-binding protein] -0.179 0.014
85 261785_at AT1G08230 [Transmembrane amino acid transporter family protein] -0.176 0.024
86 260005_at AT1G67920 unknown -0.176 -0.028
87 258570_at AT3G04530 ATPPCK2, PEPCK2, PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2, PPCK2, phosphoenolpyruvate carboxylase kinase 2 -0.173 -0.016
88 248395_at AT5G52120 AtPP2-A14, phloem protein 2-A14, PP2-A14, phloem protein 2-A14 -0.172 0.067
89 247212_at AT5G65040 unknown -0.166 -0.038
90 251342_at AT3G60690 SAUR59, SMALL AUXIN UPREGULATED RNA 59 -0.165 -0.002
91 259769_at AT1G29400 AML5, MEI2-like protein 5, ML5, MEI2-like protein 5 -0.162 0.007
92 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 -0.157 -0.000
93 250103_at AT5G16600 AtMYB43, myb domain protein 43, MYB43, myb domain protein 43 -0.155 0.033
94 262072_at AT1G59590 ZCF37 -0.154 0.033
95 250157_at AT5G15180 [Peroxidase superfamily protein] -0.153 -0.026
96 267217_at AT2G02610 [Cysteine/Histidine-rich C1 domain family protein] -0.152 0.007
97 263674_at AT2G04790 unknown -0.152 -0.009
98 259340_at AT3G03870 unknown -0.151 0.018
99 245325_at AT4G14130 XTH15, xyloglucan endotransglucosylase/hydrolase 15, XTR7, xyloglucan endotransglycosylase 7 -0.149 -0.017
100 263797_at AT2G24570 ATWRKY17, WRKY17, WRKY DNA-binding protein 17 -0.149 -0.016
101 267226_at AT2G44010 unknown -0.147 -0.005
102 264026_at AT2G21060 ATCSP4, COLD SHOCK DOMAIN PROTEIN 4, ATGRP2B, glycine-rich protein 2B, GRP2B, glycine-rich protein 2B -0.145 -0.025
103 258196_at AT3G13980 unknown -0.141 0.009
104 247284_at AT5G64410 ATOPT4, ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 4, OPT4, oligopeptide transporter 4 -0.141 -0.006
105 258263_at AT3G15780 unknown -0.137 0.039
106 249211_at AT5G42680 unknown -0.132 -0.007
107 246947_at AT5G25120 CYP71B11, ytochrome p450, family 71, subfamily B, polypeptide 11 -0.131 0.007
108 251420_at AT3G60490 [Integrase-type DNA-binding superfamily protein] -0.131 0.048
109 263947_at AT2G35820 [ureidoglycolate hydrolases] -0.131 0.050
110 248347_at AT5G52250 EFO1, EARLY FLOWERING BY OVEREXPRESSION 1, RUP1, REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 -0.131 -0.072
111 252484_at AT3G46690 [UDP-Glycosyltransferase superfamily protein] -0.129 0.008
112 255538_at AT4G01680 AtMYB55, myb domain protein 55, MYB55, myb domain protein 55 -0.129 -0.030
113 264590_at AT2G17710 unknown -0.128 -0.014
114 264697_at AT1G70210 ATCYCD1;1, CYCD1;1, CYCLIN D1;1 -0.128 0.010
115 254794_at AT4G12970 EPFL9, STOMAGEN, STOMAGEN -0.127 0.083
116 263595_at AT2G01890 ATPAP8, PURPLE ACID PHOSPHATASE 8, PAP8, purple acid phosphatase 8 -0.126 0.012
117 263574_at AT2G16990 [Major facilitator superfamily protein] -0.125 0.016
118 255255_at AT4G05070 [Wound-responsive family protein] -0.123 0.016
119 259977_at AT1G76590 [PLATZ transcription factor family protein] -0.123 0.039
120 259235_at AT3G11600 unknown -0.121 -0.013
121 253400_at AT4G32860 unknown -0.119 0.060
122 261841_at AT1G15920 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -0.118 0.012
123 256930_at AT3G22460 OASA2, O-acetylserine (thiol) lyase (OAS-TL) isoform A2 -0.116 0.021
124 254175_at AT4G24050 [NAD(P)-binding Rossmann-fold superfamily protein] -0.113 0.013
125 245186_at AT1G67710 ARR11, response regulator 11 -0.113 0.008
126 245682_at AT5G08750 [RING/FYVE/PHD zinc finger superfamily protein] -0.113 -0.027
127 245317_at AT4G15610 [Uncharacterised protein family (UPF0497)] -0.110 -0.011
128 247912_at AT5G57480 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.110 0.098
129 250734_at AT5G06270 unknown -0.110 -0.010
130 253246_at AT4G34600 unknown -0.109 0.060
131 259520_at AT1G12320 unknown -0.109 0.092
132 248167_at AT5G54530 unknown -0.108 0.022
133 245078_at AT2G23340 DEAR3, DREB and EAR motif protein 3 -0.108 -0.020