4.0:Information of module
rosette leaves bdg
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006865 amino acid transport BP 3.310e-13
GO:0006820 anion transport BP 9.185e-13
GO:0015711 organic anion transport BP 1.282e-12
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006662 glycerol ether metabolic process BP 9.428e-03
GO:0018904 ether metabolic process BP 9.428e-03
GO:0009736 cytokinin-activated signaling pathway BP 1.009e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rosette leaves bdg		 Log2 signal ratio
bri1-116
1 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 1.109 -0.050
2 250500_at AT5G09530 PELPK1, Pro-Glu-Leu|Ile|Val-Pro-Lys 1, PRP10, proline-rich protein 10 1.032 0.076
3 253608_at AT4G30290 ATXTH19, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, XTH19, xyloglucan endotransglucosylase/hydrolase 19 0.931 -0.538
4 251065_at AT5G01870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.909 0.499
5 264415_at AT1G43160 RAP2.6, related to AP2 6 0.868 0.030
6 248812_at AT5G47330 [alpha/beta-Hydrolases superfamily protein] 0.793 -0.020
7 248218_at AT5G53710 unknown 0.686 -0.197
8 250365_at AT5G11410 [Protein kinase superfamily protein] 0.676 0.011
9 267008_at AT2G39350 ABCG1, ATP-binding cassette G1 0.662 0.021
10 258209_at AT3G14060 unknown 0.659 0.089
11 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.651 -0.016
12 264318_at AT1G04220 KCS2, 3-ketoacyl-CoA synthase 2 0.569 -0.236
13 247013_at AT5G67480 ATBT4, BT4, BTB and TAZ domain protein 4 0.567 0.495
14 252984_at AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 0.551 0.010
15 248611_at AT5G49520 ATWRKY48, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY48, WRKY DNA-binding protein 48 0.550 -0.201
16 257679_at AT3G20470 ATGRP-5, ATGRP5, GRP-5, GLYCINE-RICH PROTEIN 5, GRP5, glycine-rich protein 5 0.543 -0.192
17 250798_at AT5G05340 PRX52, peroxidase 52 0.536 -0.040
18 247492_at AT5G61890 [Integrase-type DNA-binding superfamily protein] 0.527 0.044
19 253309_at AT4G33790 CER4, ECERIFERUM 4, FAR3, FATTY ACID REDUCTASE 3, G7 0.520 -0.195
20 248236_at AT5G53870 AtENODL1, ENODL1, early nodulin-like protein 1 0.478 -0.293
21 252511_at AT3G46280 [protein kinase-related] 0.464 -0.397
22 261410_at AT1G07610 MT1C, metallothionein 1C 0.458 -0.031
23 254098_at AT4G25100 ATFSD1, ARABIDOPSIS FE SUPEROXIDE DISMUTASE 1, FSD1, Fe superoxide dismutase 1 -0.569 0.115
24 266516_at AT2G47880 [Glutaredoxin family protein] -0.446 -0.033
25 265993_at AT2G24160 [pseudogene] -0.363 0.029
26 257254_at AT3G21950 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.343 -0.104
27 248888_at AT5G46240 AtKAT1, KAT1, potassium channel in Arabidopsis thaliana 1 -0.341 -0.027
28 246535_at AT5G15900 TBL19, TRICHOME BIREFRINGENCE-LIKE 19 -0.309 -0.273
29 263480_at AT2G04032 ZIP7, zinc transporter 7 precursor -0.295 0.014
30 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.285 0.007
31 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.274 -0.115
32 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 -0.269 -0.068
33 251509_at AT3G59010 PME35, pectin methylesterase 35, PME61, pectin methylesterase 61 -0.236 -0.828
34 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.229 0.044
35 249320_at AT5G40910 [Disease resistance protein (TIR-NBS-LRR class) family] -0.227 0.243
36 247832_at AT5G58550 EOL2, ETO1-like 2 -0.202 -0.041
37 263558_at AT2G16380 [Sec14p-like phosphatidylinositol transfer family protein] -0.201 0.139
38 261335_at AT1G44800 SIAR1, Siliques Are Red 1, UMAMIT18, Usually multiple acids move in and out Transporters 18 -0.199 -0.111
39 251733_at AT3G56240 CCH, copper chaperone -0.190 -0.001
40 260773_at AT1G78440 ATGA2OX1, Arabidopsis thaliana gibberellin 2-oxidase 1, GA2OX1, gibberellin 2-oxidase 1 -0.157 0.044
41 261339_at AT1G35710 [Protein kinase family protein with leucine-rich repeat domain] -0.152 0.079
42 261946_at AT1G64560 -0.148 0.200
43 256976_at AT3G21020 [copia-like retrotransposon family, has a 5.4e-14 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] -0.145 0.096