4.0:Information of module
per1 in Pi deficiency medium
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006457 protein folding BP 2.007e-05
GO:0009987 cellular process BP 3.586e-04
GO:0046483 heterocycle metabolic process BP 5.454e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1901607 alpha-amino acid biosynthetic process BP 3.209e-04
GO:1901566 organonitrogen compound biosynthetic pro... BP 4.446e-04
GO:0043933 macromolecular complex subunit organizat... BP 4.576e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
per1 in Pi deficiency medium		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 250135_at AT5G15360 unknown 0.707 -0.502
2 260741_at AT1G15040 GAT, glutamine amidotransferase, GAT1_2.1, glutamine amidotransferase 1_2.1 0.319 -0.165
3 245728_at AT1G73340 [Cytochrome P450 superfamily protein] 0.275 -0.226
4 259832_at AT1G69580 [Homeodomain-like superfamily protein] 0.236 -0.679
5 247047_at AT5G66650 unknown 0.224 -0.742
6 253301_at AT4G33720 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.211 -1.022
7 249890_at AT5G22570 ATWRKY38, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 38, WRKY38, WRKY DNA-binding protein 38 0.198 0.215
8 260975_at AT1G53430 [Leucine-rich repeat transmembrane protein kinase] 0.198 -0.645
9 250809_at AT5G05140 [Transcription elongation factor (TFIIS) family protein] 0.186 -0.169
10 259065_at AT3G07520 ATGLR1.4, GLR1.4, glutamate receptor 1.4 0.176 -0.716
11 245813_at AT1G49920 [MuDR family transposase] 0.165 -1.105
12 252510_at AT3G46270 [receptor protein kinase-related] 0.162 -1.057
13 266283_at AT2G29210 [splicing factor PWI domain-containing protein] 0.150 0.894
14 266135_at AT2G45100 [Cyclin/Brf1-like TBP-binding protein] 0.148 0.809
15 265592_at AT2G20110 [Tesmin/TSO1-like CXC domain-containing protein] 0.144 -0.509
16 246591_at AT5G14880 KUP8, potassium uptake 8 0.139 -0.528
17 262164_at AT1G78070 [Transducin/WD40 repeat-like superfamily protein] 0.136 -0.545
18 246374_at AT1G51840 [protein kinase-related] 0.133 -0.127
19 256513_at AT1G31480 SGR2, SHOOT GRAVITROPISM 2 0.132 0.160
20 246529_at AT5G15730 AtCRLK2, CRLK2, calcium/calmodulin-regulated receptor-like kinase 2 0.130 -0.225
21 264040_at AT2G03730 ACR5, ACT domain repeat 5 0.128 0.915
22 264487_at AT1G77140 ATVPS45, BEN2, bfa-visualized endocytic trafficking defective 2, VPS45, vacuolar protein sorting 45 0.126 -0.294
23 249079_at AT5G43930 [Transducin family protein / WD-40 repeat family protein] 0.124 -0.452
24 260156_at AT1G52880 ANAC018, Arabidopsis NAC domain containing protein 18, ATNAM, NAM, NO APICAL MERISTEM, NARS2, NAC-REGULATED SEED MORPHOLOGY 2 0.120 -0.868
25 265942_at AT2G19470 ckl5, casein kinase I-like 5 0.117 0.738
26 263985_at AT2G42750 DJC77, DNA J protein C77 0.115 0.514
27 259721_at AT1G60890 [Phosphatidylinositol-4-phosphate 5-kinase family protein] 0.114 -0.070
28 249292_at AT5G41150 ATRAD1, RAD1, UVH1, ULTRAVIOLET HYPERSENSITIVE 1 0.112 -0.611
29 251148_at AT3G63180 ATTKL, TICKLE, TKL, TIC-like 0.112 -0.355
30 249729_at AT5G24410 PGL4, 6-phosphogluconolactonase 4 0.111 -0.034
31 260303_at AT1G70520 ASG6, ALTERED SEED GERMINATION 6, CRK2, cysteine-rich RLK (RECEPTOR-like protein kinase) 2 0.107 0.640
32 255185_at AT4G07740 unknown 0.105 -0.896
33 255072_at AT4G09080 ATTOC75-IV, TRANSLOCON OUTER MEMBRANE COMPLEX 75-IV, TOC75-IV, translocon at the outer envelope membrane of chloroplasts 75-IV 0.104 -0.008
34 247103_at AT5G66610 DAR7, DA1-related protein 7 0.104 0.406
35 267136_at AT2G23460 ATXLG1, XLG1, extra-large G-protein 1 0.104 -0.259
36 253763_at AT4G28850 ATXTH26, XTH26, xyloglucan endotransglucosylase/hydrolase 26 -0.404 -0.888
37 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 -0.398 0.259
38 259765_at AT1G64370 unknown -0.372 -0.759
39 253211_at AT4G34880 [Amidase family protein] -0.292 -0.380
40 263470_at AT2G31900 ATMYO5, MYOSIN 5, ATXIF, MYOSIN XI F, XIF, myosin-like protein XIF -0.276 -0.625
41 253244_at AT4G34580 AtSFH1, COW1, CAN OF WORMS1, SRH1, SHORT ROOT HAIR 1 -0.274 -0.636
42 255294_at AT4G04750 [Major facilitator superfamily protein] -0.242 -0.408
43 249557_at AT5G38280 PR5K, PR5-like receptor kinase -0.234 -0.121
44 258652_at AT3G09910 ATRAB18C, ATRABC2B, RAB GTPase homolog C2B, RABC2b, RAB GTPase homolog C2B -0.222 -0.663
45 263465_at AT2G31940 unknown -0.216 -0.484
46 249756_at AT5G24313 unknown -0.215 -1.187
47 260401_at AT1G69840 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] -0.215 -0.049
48 246330_at AT3G43600 AAO2, aldehyde oxidase 2, AO3, aldehyde oxidase 3, AOgamma, Aldehyde oxidase gamma, atAO-2, Arabidopsis thaliana aldehyde oxidase 2, AtAO3, Arabidopsis thaliana aldehyde oxidase 3 -0.214 0.893
49 248151_at AT5G54270 LHCB3, light-harvesting chlorophyll B-binding protein 3, LHCB3*1 -0.211 1.365
50 262283_at AT1G68590 PSRP3/1, plastid-specific ribosomal protein 3/1 -0.203 0.513
51 253768_at AT4G28550 [Ypt/Rab-GAP domain of gyp1p superfamily protein] -0.187 -0.302
52 250798_at AT5G05340 PRX52, peroxidase 52 -0.169 0.461
53 267191_at AT2G44110 ATMLO15, MILDEW RESISTANCE LOCUS O 15, MLO15, MILDEW RESISTANCE LOCUS O 15 -0.168 -0.697
54 245106_at AT2G41650 unknown -0.165 0.294
55 247914_at AT5G57540 AtXTH13, XTH13, xyloglucan endotransglucosylase/hydrolase 13 -0.164 0.262
56 248054_at AT5G55820 WYR, WYRD -0.163 -0.523
57 255658_at AT4G00770 TRM9, TON1 Recruiting Motif 9 -0.159 -0.224
58 249531_at AT5G38770 AtGDU7, glutamine dumper 7, GDU7, glutamine dumper 7 -0.154 -0.160
59 252520_at AT3G46370 [Leucine-rich repeat protein kinase family protein] -0.154 -0.935
60 263616_at AT2G04680 [Cysteine/Histidine-rich C1 domain family protein] -0.150 -0.973
61 245215_at AT1G67830 ATFXG1, Arabidopsis thaliana alpha-fucosidase 1, FXG1, alpha-fucosidase 1 -0.149 0.498
62 254362_at AT4G22160 unknown -0.143 0.111
63 245456_at AT4G16950 RPP5, RECOGNITION OF PERONOSPORA PARASITICA 5 -0.141 0.261
64 264752_at AT1G23010 LPR1, Low Phosphate Root1 -0.141 0.528
65 258787_at AT3G11840 PUB24, plant U-box 24 -0.136 -0.767
66 251885_at AT3G54050 HCEF1, high cyclic electron flow 1 -0.136 0.981
67 261530_at AT1G63460 ATGPX8, GPX8, glutathione peroxidase 8 -0.134 0.114
68 250788_at AT5G05570 [transducin family protein / WD-40 repeat family protein] -0.131 0.158
69 255572_at AT4G01050 TROL, thylakoid rhodanese-like -0.128 0.007