4.0:Information of module
SCR-GR Time 1H Dex
In comparison with Dark 1day wt help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010033 response to organic substance BP 5.449e-07
GO:0030968 endoplasmic reticulum unfolded protein r... BP 5.356e-06
GO:0006986 response to unfolded protein BP 5.814e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0008283 cell proliferation BP 1.995e-13
GO:1903047 mitotic cell cycle process BP 9.171e-13
GO:0000281 mitotic cytokinesis BP 3.912e-12
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
SCR-GR Time 1H Dex		 Log2 signal ratio
Dark 1day wt
1 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 0.437 8.452
2 253963_at AT4G26470 [Calcium-binding EF-hand family protein] 0.386 0.703
3 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.336 -1.895
4 245566_at AT4G14610 [pseudogene] 0.334 -0.907
5 247061_at AT5G66780 unknown 0.314 -0.334
6 249364_at AT5G40590 [Cysteine/Histidine-rich C1 domain family protein] 0.292 -0.334
7 263565_at AT2G15390 atfut4, FUT4, fucosyltransferase 4 0.282 -1.153
8 246600_at AT5G14930 SAG101, senescence-associated gene 101 0.281 1.043
9 253322_at AT4G33980 unknown 0.279 10.350
10 245363_at AT4G15120 [VQ motif-containing protein] 0.273 -0.117
11 259008_at AT3G09390 ATMT-1, ARABIDOPSIS THALIANA METALLOTHIONEIN-1, ATMT-K, ARABIDOPSIS THALIANA METALLOTHIONEIN-K, MT2A, metallothionein 2A 0.246 3.257
12 247913_at AT5G57510 unknown 0.225 0.584
13 254559_at AT4G19200 [proline-rich family protein] 0.211 0.677
14 248570_at AT5G49780 [Leucine-rich repeat protein kinase family protein] 0.193 -2.383
15 265501_at AT2G15490 UGT73B4, UDP-glycosyltransferase 73B4 0.182 -0.815
16 261125_at AT1G04990 [Zinc finger C-x8-C-x5-C-x3-H type family protein] 0.181 0.902
17 248931_at AT5G46040 [Major facilitator superfamily protein] 0.179 -0.334
18 266246_at AT2G27690 CYP94C1, cytochrome P450, family 94, subfamily C, polypeptide 1 0.177 0.626
19 251200_at AT3G63010 ATGID1B, GID1B, GA INSENSITIVE DWARF1B 0.171 1.822
20 260287_at AT1G80440 KFB20, Kelch repeat F-box 20, KMD1, KISS ME DEADLY 1 0.167 2.511
21 256522_at AT1G66160 ATCMPG1, CMPG1, CYS, MET, PRO, and GLY protein 1 0.155 0.197
22 259874_at AT1G76660 unknown 0.153 0.755
23 261771_at AT1G76150 ATECH2, ECH2, enoyl-CoA hydratase 2 0.153 1.975
24 259287_at AT3G11490 [rac GTPase activating protein] 0.151 0.486
25 253780_at AT4G28400 [Protein phosphatase 2C family protein] 0.151 -0.662
26 262887_at AT1G14780 [MAC/Perforin domain-containing protein] 0.147 -0.372
27 267347_at AT2G39950 unknown 0.143 2.690
28 246305_at AT3G51890 CLC3, clathrin light chain 3 0.140 1.447
29 260648_at AT1G08050 [Zinc finger (C3HC4-type RING finger) family protein] 0.138 -1.685
30 253956_at AT4G26700 ATFIM1, ARABIDOPSIS THALIANA FIMBRIN 1, FIM1, fimbrin 1 0.135 0.396
31 262552_at AT1G31350 KUF1, KAR-UP F-box 1 0.135 1.626
32 267623_at AT2G39650 unknown 0.132 -0.223
33 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 0.132 -0.334
34 260284_at AT1G80380 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.131 -0.323
35 248111_at AT5G55330 [MBOAT (membrane bound O-acyl transferase) family protein] 0.125 -0.334
36 256763_at AT3G16860 COBL8, COBRA-like protein 8 precursor 0.124 1.485
37 263411_at AT2G28710 [C2H2-type zinc finger family protein] 0.124 1.324
38 255460_at AT4G02800 unknown -0.427 -1.316
39 263850_at AT2G04480 unknown -0.402 -0.334
40 246557_at AT5G15510 [TPX2 (targeting protein for Xklp2) protein family] -0.377 -3.268
41 261384_at AT1G05440 [C-8 sterol isomerases] -0.374 -2.039
42 252691_at AT3G44050 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.363 -3.550
43 263441_at AT2G28620 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.354 -4.480
44 253978_at AT4G26660 unknown -0.354 -4.436
45 245343_at AT4G15830 [ARM repeat superfamily protein] -0.351 -2.879
46 267006_at AT2G34190 [Xanthine/uracil permease family protein] -0.342 0.301
47 261086_at AT1G17460 TRFL3, TRF-like 3 -0.337 3.527
48 246269_at AT4G37110 [Zinc-finger domain of monoamine-oxidase A repressor R1] -0.336 -2.663
49 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 -0.330 -4.913
50 259290_at AT3G11520 CYC2, CYCLIN 2, CYCB1;3, CYCLIN B1;3 -0.329 -3.986
51 254233_at AT4G23800 3xHMG-box2, 3xHigh Mobility Group-box2 -0.320 -3.851
52 254986_at AT4G10640 IQD16, IQ-domain 16 -0.319 0.190
53 266008_at AT2G37390 NAKR2, SODIUM POTASSIUM ROOT DEFECTIVE 2 -0.316 -1.826
54 263610_at AT2G16230 [O-Glycosyl hydrolases family 17 protein] -0.305 -0.334
55 247399_at AT5G62960 unknown -0.298 -0.628
56 254109_at AT4G25240 SKS1, SKU5 similar 1 -0.252 -3.224
57 248807_at AT5G47500 PME5, pectin methylesterase 5 -0.240 -1.334
58 248696_at AT5G48360 [Actin-binding FH2 (formin homology 2) family protein] -0.238 -1.322
59 254728_at AT4G13690 unknown -0.220 -2.706
60 253027_at AT4G38150 [Pentatricopeptide repeat (PPR) superfamily protein] -0.217 1.136
61 258462_at AT3G17350 unknown -0.215 -1.773
62 252888_at AT4G39210 APL3 -0.213 -1.516
63 256125_at AT1G18250 ATLP-1 -0.209 -4.652
64 249184_at AT5G43020 [Leucine-rich repeat protein kinase family protein] -0.209 -0.709
65 256675_at AT3G52170 [DNA binding] -0.206 -1.132
66 266672_at AT2G29650 ANTR1, anion transporter 1, PHT4;1, phosphate transporter 4;1 -0.198 -2.212
67 255169_x_at AT4G07940 unknown -0.197 -0.334
68 253804_at AT4G28230 unknown -0.196 2.036
69 250434_at AT5G10390 H3.1, histone 3.1 -0.193 -3.802
70 264895_at AT1G23100 [GroES-like family protein] -0.190 -1.661
71 250661_at AT5G07030 [Eukaryotic aspartyl protease family protein] -0.184 -1.791
72 262738_at AT1G28530 unknown -0.184 -1.948
73 245236_at AT4G25540 ATMSH3, MSH3, homolog of DNA mismatch repair protein MSH3 -0.182 -1.824