4.0:Information of module
protoplasts T2 [flg22]
In comparison with Shoot apex inflorescence (after bolting) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 2.400e-11
GO:0010243 response to organonitrogen compound BP 5.171e-11
GO:1901698 response to nitrogen compound BP 7.946e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010212 response to ionizing radiation BP 1.448e-05
GO:0010332 response to gamma radiation BP 2.386e-05
GO:0031323 regulation of cellular metabolic process BP 8.291e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
protoplasts T2 [flg22]		 Log2 signal ratio
Shoot apex inflorescence (after bolting)
1 253503_at AT4G31950 CYP82C3, cytochrome P450, family 82, subfamily C, polypeptide 3 1.154 -1.573
2 257846_at AT3G12910 [NAC (No Apical Meristem) domain transcriptional regulator superfamily protein] 1.111 -0.392
3 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 0.935 -0.128
4 258364_at AT3G14225 GLIP4, GDSL-motif lipase 4 0.927 -0.664
5 262731_at AT1G16420 ATMC8, ARABIDOPSIS THALIANA METACASPASE 8, AtMCP2e, metacaspase 2e, MC8, metacaspase 8, MCP2e, metacaspase 2e 0.910 -0.084
6 255339_at AT4G04480 unknown 0.834 -0.166
7 267384_at AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] 0.797 -0.813
8 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.742 -0.302
9 248770_at AT5G47740 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.640 -0.668
10 254964_at AT4G11080 3xHMG-box1, 3xHigh Mobility Group-box1 0.570 -0.370
11 261006_at AT1G26410 [FAD-binding Berberine family protein] 0.476 -0.063
12 260399_at AT1G72520 ATLOX4, Arabidopsis thaliana lipoxygenase 4, LOX4, lipoxygenase 4 0.465 -0.726
13 259252_at AT3G07610 IBM1, increase in bonsai methylation 1 0.413 -0.256
14 260560_at AT2G43590 [Chitinase family protein] 0.402 -0.702
15 253796_at AT4G28460 unknown 0.377 0.310
16 251684_at AT3G56410 unknown 0.372 -0.672
17 250796_at AT5G05300 unknown 0.370 -0.255
18 258545_at AT3G07050 NSN1, nucleostemin-like 1 0.369 0.995
19 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] 0.353 -0.794
20 248276_at AT5G53550 ATYSL3, YELLOW STRIPE LIKE 3, YSL3, YELLOW STRIPE like 3 0.352 -0.531
21 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.338 -0.959
22 256044_at AT1G07160 [Protein phosphatase 2C family protein] 0.315 0.203
23 267034_at AT2G38310 PYL4, PYR1-like 4, RCAR10, regulatory components of ABA receptor 10 0.311 0.582
24 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 0.310 0.245
25 259278_at AT3G01160 unknown 0.309 -0.218
26 260011_at AT1G68110 [ENTH/ANTH/VHS superfamily protein] 0.308 -1.253
27 259282_at AT3G11430 ATGPAT5, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5, GPAT5, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5 -1.125 -0.061
28 248668_at AT5G48720 XRI, X-RAY INDUCED TRANSCRIPT, XRI1, X-RAY INDUCED TRANSCRIPT 1 -1.044 0.489
29 253051_at AT4G37490 CYC1, CYCLIN 1, CYCB1, CYCB1;1, CYCLIN B1;1 -0.895 0.625
30 249771_at AT5G24080 [Protein kinase superfamily protein] -0.886 -0.159
31 267207_at AT2G30840 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.866 -0.493
32 246132_at AT5G20850 ATRAD51, RAD51 -0.829 0.291
33 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] -0.827 0.149
34 265573_at AT2G28200 [C2H2-type zinc finger family protein] -0.805 -0.512
35 264280_at AT1G61820 BGLU46, beta glucosidase 46 -0.769 -0.290
36 261065_at AT1G07500 SMR5, SIAMESE-RELATED 5 -0.766 0.422
37 250914_at AT5G03780 TRFL10, TRF-like 10 -0.763 -0.453
38 255500_at AT4G02390 APP, poly(ADP-ribose) polymerase, PARP2, poly(ADP-ribose) polymerase 2, PP, poly(ADP-ribose) polymerase -0.741 0.753
39 256937_at AT3G22620 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.698 -0.557
40 245264_at AT4G17245 [RING/U-box superfamily protein] -0.676 -0.031
41 260335_at AT1G74000 SS3, strictosidine synthase 3 -0.674 -0.466
42 249586_at AT5G37840 unknown -0.666 -0.334
43 247492_at AT5G61890 [Integrase-type DNA-binding superfamily protein] -0.648 -0.589
44 251824_at AT3G55090 ABCG16, ATP-binding cassette G16 -0.568 -0.455
45 245137_at AT2G45460 [SMAD/FHA domain-containing protein ] -0.519 0.759
46 259293_at AT3G11580 [AP2/B3-like transcriptional factor family protein] -0.497 0.250
47 256407_at AT1G66570 ATSUC7, sucrose-proton symporter 7, SUC7, sucrose-proton symporter 7 -0.478 -0.410
48 247447_at AT5G62730 [Major facilitator superfamily protein] -0.430 0.033
49 258044_at AT3G21270 ADOF2, DOF zinc finger protein 2, DOF2, DOF zinc finger protein 2 -0.399 0.129
50 253364_at AT4G33160 [F-box family protein] -0.398 -0.195
51 261086_at AT1G17460 TRFL3, TRF-like 3 -0.391 -0.364