4.0:Information of module
WT NAA 1h
In comparison with Regenerating Stump Root Tip Cut 130 mm andn Recut 13 hrs Taking 70 mm of Stump (4dpg) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009733 response to auxin BP 1.881e-24
GO:0009719 response to endogenous stimulus BP 1.703e-16
GO:0009725 response to hormone BP 8.447e-15
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001708 cell fate specification BP 8.611e-03
GO:0045736 negative regulation of cyclin-dependent ... BP 9.797e-03
GO:0048366 leaf development BP 1.005e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
WT NAA 1h		 Log2 signal ratio
Regenerating Stump Root Tip Cut 130 mm andn Recut 13 hrs Taking 70 mm of Stump (4dpg)
1 245076_at AT2G23170 GH3.3 1.374 0.239
2 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.810 -0.400
3 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 0.759 0.377
4 257766_at AT3G23030 IAA2, indole-3-acetic acid inducible 2 0.591 0.368
5 248321_at AT5G52740 [Copper transport protein family] 0.578 -0.932
6 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 0.561 -0.474
7 257900_at AT3G28420 [Putative membrane lipoprotein] 0.559 -0.083
8 261717_at AT1G18400 BEE1, BR enhanced expression 1 0.557 -0.474
9 248801_at AT5G47370 HAT2 0.549 0.130
10 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 0.506 -0.254
11 262263_at AT1G70940 ATPIN3, ARABIDOPSIS PIN-FORMED 3, PIN3, PIN-FORMED 3 0.502 -0.247
12 261662_at AT1G18350 ATMKK7, MAP kinase kinase 7, BUD1, BUSHY AND DWARF 1, MKK7, MAP kinase kinase 7, MKK7, MAP KINASE KINASE7 -0.322 0.106
13 260890_at AT1G29090 [Cysteine proteinases superfamily protein] -0.298 -0.659
14 266820_at AT2G44940 [Integrase-type DNA-binding superfamily protein] -0.261 -0.135
15 260059_at AT1G78090 ATTPPB, Arabidopsis thaliana trehalose-6-phosphate phosphatase B, TPPB, trehalose-6-phosphate phosphatase B -0.230 -0.132
16 249211_at AT5G42680 unknown -0.170 0.584
17 256503_at AT1G75250 ATRL6, RAD-like 6, RL6, RAD-like 6, RSM3, RADIALIS-LIKE SANT/MYB 3 -0.151 0.771
18 248553_at AT5G50170 [C2 calcium/lipid-binding and GRAM domain containing protein] -0.142 -0.641
19 260812_at AT1G43650 UMAMIT22, Usually multiple acids move in and out Transporters 22 -0.133 -0.523
20 253192_at AT4G35370 [Transducin/WD40 repeat-like superfamily protein] -0.117 -1.046
21 262170_at AT1G74940 unknown -0.107 -0.077