4.0:Information of module
WT Atum 1h
In comparison with Regenerating Stump Root Tip Cut 130 mm andn Recut 22 hrs Taking 70 mm of Stump (4dpg) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0034654 nucleobase-containing compound biosynthe... BP 2.013e-02
GO:0032957 inositol trisphosphate metabolic process BP 2.477e-02
GO:0043455 regulation of secondary metabolic proces... BP 2.477e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1901657 glycosyl compound metabolic process BP 7.783e-04
GO:0001708 cell fate specification BP 1.404e-03
GO:0009116 nucleoside metabolic process BP 2.598e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
WT Atum 1h		 Log2 signal ratio
Regenerating Stump Root Tip Cut 130 mm andn Recut 22 hrs Taking 70 mm of Stump (4dpg)
1 244903_at ATMG00660 ORF149 0.095 0.255
2 263652_at AT1G04330 unknown 0.070 -0.389
3 258385_at AT3G15510 ANAC056, Arabidopsis NAC domain containing protein 56, ATNAC2, NAC domain containing protein 2, NAC2, NAC domain containing protein 2, NARS1, NAC-REGULATED SEED MORPHOLOGY 1 0.064 -0.213
4 263904_at AT2G36380 ABCG34, ATP-binding cassette G34, ATPDR6, PLEIOTROPIC DRUG RESISTANCE 6, PDR6, pleiotropic drug resistance 6 0.063 0.813
5 245078_at AT2G23340 DEAR3, DREB and EAR motif protein 3 0.060 0.682
6 250009_at AT5G18440 AtNUFIP, NUFIP, nuclear FMRP-interacting protein 0.047 -0.164
7 246157_at AT5G20080 [FAD/NAD(P)-binding oxidoreductase] 0.041 0.294
8 260181_at AT1G70710 ATGH9B1, glycosyl hydrolase 9B1, CEL1, CELLULASE 1, GH9B1, glycosyl hydrolase 9B1 -0.146 0.876
9 265497_at AT2G15720 [non-LTR retrotransposon family (LINE), has a 5.4e-35 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)] -0.144 -0.605
10 257977_at AT3G20850 [proline-rich family protein] -0.133 -0.330
11 256500_at AT1G36620 [copia-like retrotransposon family, has a 3.6e-54 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -0.132 0.122
12 257480_at AT1G15640 unknown -0.129 -0.374
13 258307_x_at AT3G30560 [similar to AT hook motif-containing protein-related [Arabidopsis thaliana] (TAIR:AT1G35940.1)] -0.126 -0.522
14 250322_at AT5G12870 ATMYB46, MYB DOMAIN PROTEIN 46, MYB46, myb domain protein 46 -0.126 -0.133
15 264282_at AT1G61840 [Cysteine/Histidine-rich C1 domain family protein] -0.125 -0.569
16 253250_at AT4G34690 unknown -0.123 0.241
17 265681_at AT2G24370 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] -0.122 -0.101
18 263970_at AT2G42850 CYP718, cytochrome P450, family 718 -0.121 0.228
19 248731_at AT5G48060 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.118 -0.655
20 264782_at AT1G08810 AtMYB60, myb domain protein 60, MYB60, myb domain protein 60 -0.118 -0.788