4.0:Information of module
AFB1 0h
In comparison with Section Root from70 mm to 340 mm harvested immediately help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0000059 protein import into nucleus, docking BP 6.020e-04
GO:0006354 DNA-templated transcription, elongation BP 3.171e-03
GO:0000741 karyogamy BP 6.416e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001708 cell fate specification BP 3.924e-03
GO:0045165 cell fate commitment BP 5.732e-03
GO:0006979 response to oxidative stress BP 2.395e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
AFB1 0h		 Log2 signal ratio
Section Root from70 mm to 340 mm harvested immediately
1 255417_at AT4G03190 AFB1, AUXIN SIGNALING F BOX PROTEIN 1, ATGRH1, GRH1, GRR1-like protein 1 0.954 0.998
2 244995_at ATCG00150 ATPI 0.193 0.258
3 253865_at AT4G27470 ATRMA3, RMA3, RING membrane-anchor 3 0.152 0.590
4 244903_at ATMG00660 ORF149 0.150 0.472
5 245892_at AT5G09370 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.146 0.227
6 258736_at AT3G05900 [neurofilament protein-related] 0.145 0.953
7 259915_at AT1G72790 [hydroxyproline-rich glycoprotein family protein] 0.123 0.445
8 244923_s_at ATMG01020 ORF153B 0.117 0.026
9 260666_at AT1G19300 ATGATL1, GATL1, GALACTURONOSYLTRANSFERASE-LIKE 1, GLZ1, GAOLAOZHUANGREN 1, PARVUS, PARVUS 0.113 -0.848
10 254619_at AT4G18770 AtMYB98, myb domain protein 98, MYB98, myb domain protein 98 0.110 -1.095
11 252173_at AT3G50650 [GRAS family transcription factor] 0.104 -0.494
12 249140_at AT5G43190 [Galactose oxidase/kelch repeat superfamily protein] 0.104 0.398
13 257337_at ATMG00060 NAD5, NADH DEHYDROGENASE SUBUNIT 5, NAD5.3, NADH DEHYDROGENASE SUBUNIT 5.3, NAD5C, NADH dehydrogenase subunit 5C 0.104 -0.749
14 244939_at ATCG00065 RPS12, RIBOSOMAL PROTEIN S12, RPS12A, ribosomal protein S12A 0.102 -0.128
15 245010_at ATCG00420 NDHJ, NADH dehydrogenase subunit J 0.095 -0.503
16 257334_at ATMG01370 ORF111D 0.095 -0.478
17 244996_at ATCG00160 RPS2, ribosomal protein S2 0.091 0.177
18 262666_at AT1G14080 ATFUT6, FUT6, fucosyltransferase 6 0.089 0.588
19 245011_at ATCG00430 PSBG, photosystem II reaction center protein G 0.089 -0.589
20 267566_at AT2G30760 unknown 0.087 -1.112
21 266510_at AT2G47990 EDA13, EMBRYO SAC DEVELOPMENT ARREST 13, EDA19, EMBRYO SAC DEVELOPMENT ARREST 19, SWA1, SLOW WALKER1 0.085 1.182
22 244972_at ATCG00680 PSBB, photosystem II reaction center protein B 0.084 -0.506
23 259005_at AT3G01930 [Major facilitator superfamily protein] 0.083 0.137
24 246424_at AT5G17020 ATCRM1, ATXPO1, ARABIDOPSIS THALIANA EXPORTIN 1, HIT2, HEAT-INTOLERANT 2, XPO1, EXPORTIN 1, XPO1A, exportin 1A 0.078 0.969
25 267424_at AT2G34800 unknown 0.077 -1.177
26 252851_at AT4G40080 [ENTH/ANTH/VHS superfamily protein] 0.076 0.459
27 260206_at AT1G70740 [Protein kinase superfamily protein] 0.075 -0.195
28 249818_at AT5G23860 TUB8, tubulin beta 8 0.072 1.442
29 257202_at AT3G23750 BARK1, BAK1-Associating Receptor-Like Kinase 1 0.069 0.992
30 264541_at AT1G55660 [FBD, F-box and Leucine Rich Repeat domains containing protein] 0.069 -0.624
31 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.481 0.066
32 267645_at AT2G32860 BGLU33, beta glucosidase 33 -0.377 -0.570
33 262719_at AT1G43590 unknown -0.368 -0.081
34 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 -0.321 -0.669
35 245871_at AT1G26290 unknown -0.262 0.361
36 250155_at AT5G15160 BHLH134, BASIC HELIX-LOOP-HELIX PROTEIN 134, BNQ2, BANQUO 2 -0.245 -0.244
37 253754_at AT4G29020 [glycine-rich protein] -0.216 -0.042
38 257896_at AT3G16920 ATCTL2, CTL2, chitinase-like protein 2 -0.211 -0.498
39 260112_at AT1G63310 unknown -0.205 -0.617
40 245792_at AT1G32100 ATPRR1, PRR1, pinoresinol reductase 1 -0.197 -0.006
41 264343_at AT1G11850 unknown -0.195 0.080
42 260460_at AT1G68230 [Reticulon family protein] -0.189 -0.475
43 261870_at AT1G11570 NTL, NTF2-like -0.185 0.135
44 245947_at AT5G19530 ACL5, ACAULIS 5 -0.184 -0.452
45 267460_at AT2G33810 SPL3, squamosa promoter binding protein-like 3 -0.180 -1.085
46 260181_at AT1G70710 ATGH9B1, glycosyl hydrolase 9B1, CEL1, CELLULASE 1, GH9B1, glycosyl hydrolase 9B1 -0.178 0.818
47 266309_at AT2G27140 [HSP20-like chaperones superfamily protein] -0.177 0.567
48 262120_at AT1G02950 ATGSTF4, glutathione S-transferase F4, GST31, GLUTATHIONE S-TRANSFERASE 31, GSTF4, glutathione S-transferase F4 -0.171 -0.828
49 256609_at AT3G30843 unknown -0.171 -0.080
50 255160_at AT4G07820 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.169 0.968
51 263133_at AT1G78450 [SOUL heme-binding family protein] -0.166 0.828
52 253743_at AT4G28940 [Phosphorylase superfamily protein] -0.162 0.705
53 262438_at AT1G47410 unknown -0.160 0.360
54 253045_at AT4G37445 unknown -0.159 0.278
55 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.158 0.065
56 256349_at AT1G54890 [Late embryogenesis abundant (LEA) protein-related] -0.153 0.688
57 246254_at AT4G36450 ATMPK14, mitogen-activated protein kinase 14, MPK14, MPK14, mitogen-activated protein kinase 14 -0.152 -0.527
58 255579_at AT4G01460 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.151 -0.392
59 262388_at AT1G49320 unknown -0.151 0.121