4.0:Information of module
miR 0h
In comparison with phyB mutant 22C 10hrs help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009608 response to symbiont BP 2.905e-03
GO:0009610 response to symbiotic fungus BP 2.905e-03
GO:0048193 Golgi vesicle transport BP 6.352e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048437 floral organ development BP 7.109e-04
GO:0022618 ribonucleoprotein complex assembly BP 9.645e-04
GO:0071826 ribonucleoprotein complex subunit organi... BP 9.645e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
miR 0h		 Log2 signal ratio
phyB mutant 22C 10hrs
1 249614_at AT5G37300 WSD1 0.352 0.057
2 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.306 -0.042
3 255654_at AT4G00970 CRK41, cysteine-rich RLK (RECEPTOR-like protein kinase) 41 0.298 -0.008
4 265059_at AT1G52080 AR791 0.269 0.015
5 247990_at AT5G56360 PSL4, PRIORITY IN SWEET LIFE 4 0.243 0.016
6 262381_at AT1G72900 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.232 -0.199
7 266419_at AT2G38760 ANN3, ANNEXIN 3, ANNAT3, annexin 3, AtANN3 0.224 0.163
8 246396_at AT1G58180 ATBCA6, A. THALIANA BETA CARBONIC ANHYDRASE 6, BCA6, beta carbonic anhydrase 6 0.222 -0.017
9 266962_at AT2G39435 TRM18, TON1 Recruiting Motif 18 0.214 0.056
10 250603_at AT5G07820 [Plant calmodulin-binding protein-related] 0.204 -0.156
11 262137_at AT1G77920 TGA7, TGACG sequence-specific binding protein 7 0.203 0.058
12 254300_at AT4G22780 ACR7, ACT domain repeat 7 0.192 0.030
13 245677_at AT1G56660 unknown 0.188 -0.034
14 264479_at AT1G77280 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.186 0.008
15 260987_at AT1G53590 NTMC2T6.1, NTMC2TYPE6.1 0.171 0.077
16 250036_at AT5G18340 [ARM repeat superfamily protein] 0.168 -0.030
17 249372_at AT5G40760 G6PD6, glucose-6-phosphate dehydrogenase 6 0.168 -0.017
18 257073_at AT3G19650 [cyclin-related] 0.161 0.105
19 250479_at AT5G10260 AtRABH1e, RAB GTPase homolog H1E, RABH1e, RAB GTPase homolog H1E 0.155 -0.103
20 261538_at AT1G01830 [ARM repeat superfamily protein] 0.154 0.017
21 258017_at AT3G19370 unknown 0.149 0.129
22 253227_at AT4G35030 [Protein kinase superfamily protein] 0.147 -0.022
23 258084_at AT3G26020 [Protein phosphatase 2A regulatory B subunit family protein] 0.139 -0.033
24 263749_at AT2G21520 [Sec14p-like phosphatidylinositol transfer family protein] 0.134 -0.056
25 248082_at AT5G55400 [Actin binding Calponin homology (CH) domain-containing protein] 0.133 -0.014
26 253172_at AT4G35060 HIPP25, heavy metal associated isoprenylated plant protein 25 0.132 0.077
27 258291_at AT3G23310 [AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein] 0.126 0.032
28 260363_at AT1G70550 unknown 0.124 0.086
29 256021_at AT1G58270 ZW9 0.124 -0.052
30 261139_at AT1G19700 BEL10, BEL1-like homeodomain 10, BLH10, BEL1-LIKE HOMEODOMAIN 10 0.123 -0.032
31 252323_at AT3G48530 KING1, SNF1-related protein kinase regulatory subunit gamma 1 0.117 0.031
32 264908_at AT2G17440 PIRL5, plant intracellular ras group-related LRR 5 0.117 -0.153
33 264562_at AT1G55760 [BTB/POZ domain-containing protein] 0.114 0.042
34 258167_at AT3G21560 BRT1, Bright Trichomes 1, UGT84A2, UDP-glucosyl transferase 84A2 0.114 0.076
35 258419_at AT3G16670 [Pollen Ole e 1 allergen and extensin family protein] -0.288 0.018
36 253054_at AT4G37580 COP3, CONSTITUTIVE PHOTOMORPHOGENIC 3, HLS1, HOOKLESS 1, UNS2, UNUSUAL SUGAR RESPONSE 2 -0.254 -0.027
37 253480_at AT4G31840 AtENODL15, ENODL15, early nodulin-like protein 15 -0.227 0.035
38 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 -0.195 0.007
39 250789_at AT5G05630 PUT3, POLYAMINE UPTAKE TRANSPORTER 3, RMV1, resistant to methyl viologen 1 -0.190 0.040
40 257543_at AT3G28960 [Transmembrane amino acid transporter family protein] -0.189 0.072
41 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 -0.179 0.065
42 261893_at AT1G80690 [PPPDE putative thiol peptidase family protein] -0.173 0.062
43 259763_at AT1G77630 LYM3, lysin-motif (LysM) domain protein 3, LYP3, LysM-containing receptor protein 3 -0.171 0.049
44 252594_at AT3G45680 [Major facilitator superfamily protein] -0.169 -0.072
45 247541_at AT5G61660 [glycine-rich protein] -0.168 0.030
46 252464_at AT3G47160 [RING/U-box superfamily protein] -0.162 -0.018
47 260812_at AT1G43650 UMAMIT22, Usually multiple acids move in and out Transporters 22 -0.156 0.021
48 254274_at AT4G22770 AHL2, AT-hook motif nuclear localized protein 2 -0.154 -0.012
49 249920_at AT5G19260 FAF3, FANTASTIC FOUR 3 -0.151 -0.024
50 249234_at AT5G42200 [RING/U-box superfamily protein] -0.150 0.080
51 257600_at AT3G24770 CLE41, CLAVATA3/ESR-RELATED 41 -0.147 -0.023
52 245383_at AT4G17810 [C2H2 and C2HC zinc fingers superfamily protein] -0.143 -0.023
53 261826_at AT1G11580 ATPMEPCRA, PMEPCRA, methylesterase PCR A -0.140 0.250
54 262831_at AT1G14730 [Cytochrome b561/ferric reductase transmembrane protein family] -0.135 0.126
55 258462_at AT3G17350 unknown -0.134 0.001
56 247638_at AT5G60490 AtFLA12, FLA12, FASCICLIN-like arabinogalactan-protein 12 -0.130 0.115
57 259837_at AT1G52180 [Aquaporin-like superfamily protein] -0.130 -0.039
58 266770_at AT2G03090 ATEXP15, ATEXPA15, expansin A15, ATHEXP ALPHA 1.3, EXP15, EXPANSIN 15, EXPA15, expansin A15 -0.130 0.065
59 260298_at AT1G80320 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.130 -0.083
60 259526_at AT1G12570 [Glucose-methanol-choline (GMC) oxidoreductase family protein] -0.126 0.187
61 266072_at AT2G18700 ATTPS11, trehalose phosphatase/synthase 11, ATTPSB, TPS11, trehalose phosphatase/synthase 11, TPS11, TREHALOSE-6-PHOSPHATE SYNTHASE 11 -0.126 0.047
62 257793_at AT3G26960 [Pollen Ole e 1 allergen and extensin family protein] -0.123 0.057
63 265537_at AT2G15870 [copia-like retrotransposon family, has a 0. P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -0.122 -0.033
64 263305_at AT2G01930 ATBPC1, BASIC PENTACYSTEINE1, BBR, BPC1, basic pentacysteine1 -0.121 -0.004
65 245947_at AT5G19530 ACL5, ACAULIS 5 -0.121 0.092
66 262543_at AT1G34245 EPF2, EPIDERMAL PATTERNING FACTOR 2 -0.121 0.036
67 265689_at AT2G24310 unknown -0.119 0.030