4.0:Information of module
+GA-60mins
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009725 response to hormone BP 2.575e-17
GO:0009719 response to endogenous stimulus BP 2.277e-14
GO:0010033 response to organic substance BP 4.064e-13
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009725 response to hormone BP 2.900e-10
GO:0001101 response to acid chemical BP 5.046e-10
GO:0009739 response to gibberellin BP 1.259e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
+GA-60mins		 Log2 signal ratio
bri1-116
1 254572_at AT4G19380 [Long-chain fatty alcohol dehydrogenase family protein] 0.445 -0.731
2 249364_at AT5G40590 [Cysteine/Histidine-rich C1 domain family protein] 0.405 -0.614
3 260081_at AT1G78170 unknown 0.397 -0.010
4 264282_at AT1G61840 [Cysteine/Histidine-rich C1 domain family protein] 0.392 -0.025
5 255822_at AT2G40610 ATEXP8, ATEXPA8, expansin A8, ATHEXP ALPHA 1.11, EXP8, EXPA8, expansin A8 0.326 -0.610
6 250167_at AT5G15310 ATMIXTA, ATMYB16, myb domain protein 16, MYB16, myb domain protein 16 0.319 0.057
7 247377_at AT5G63180 [Pectin lyase-like superfamily protein] 0.305 0.114
8 247954_at AT5G56870 BGAL4, beta-galactosidase 4 0.296 -0.079
9 259445_at AT1G02400 ATGA2OX4, Arabidopsis thaliana gibberellin 2-oxidase 4, ATGA2OX6, ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6, DTA1, DOWNSTREAM TARGET OF AGL15 1, GA2OX6, gibberellin 2-oxidase 6 0.286 -0.023
10 258367_at AT3G14370 WAG2 0.284 -0.457
11 246401_at AT1G57560 AtMYB50, myb domain protein 50, MYB50, myb domain protein 50 0.281 -0.132
12 248736_at AT5G48110 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] 0.268 -0.277
13 249008_at AT5G44680 [DNA glycosylase superfamily protein] 0.262 -0.050
14 260023_at AT1G30040 ATGA2OX2, gibberellin 2-oxidase, GA2OX2, gibberellin 2-oxidase, GA2OX2, GIBBERELLIN 2-OXIDASE 2 0.261 -0.116
15 247177_at AT5G65300 unknown 0.261 0.112
16 247880_at AT5G57780 P1R1, P1R1 0.252 0.205
17 252537_at AT3G45710 [Major facilitator superfamily protein] 0.248 -0.398
18 246432_at AT5G17490 AtRGL3, RGL3, RGA-like protein 3 0.245 -0.086
19 257140_at AT3G28910 ATMYB30, MYB30, myb domain protein 30 0.245 -0.107
20 255732_at AT1G25450 CER60, ECERIFERUM 60, KCS5, 3-ketoacyl-CoA synthase 5 0.239 -0.091
21 267158_at AT2G37640 ATEXP3, EXPANSIN 3, ATEXPA3, ARABIDOPSIS THALIANA EXPANSIN A3, ATHEXP ALPHA 1.9, EXP3 0.239 -0.064
22 263690_at AT1G26960 AtHB23, homeobox protein 23, HB23, homeobox protein 23 0.236 -0.230
23 264598_at AT1G04610 YUC3, YUCCA 3 0.233 -0.519
24 262196_at AT1G77870 MUB5, membrane-anchored ubiquitin-fold protein 5 precursor 0.231 -0.044
25 251025_at AT5G02190 ATASP38, ARABIDOPSIS THALIANA ASPARTIC PROTEASE 38, EMB24, EMBRYO DEFECTIVE 24, PCS1, PROMOTION OF CELL SURVIVAL 1 0.227 -0.060
26 251374_at AT3G60390 HAT3, homeobox-leucine zipper protein 3 0.221 -0.047
27 258552_at AT3G07010 [Pectin lyase-like superfamily protein] 0.219 -0.185
28 260527_at AT2G47270 UPB1, UPBEAT1 0.218 -0.400
29 246585_at AT5G14750 ATMYB66, myb domain protein 66, MYB66, myb domain protein 66, WER, WEREWOLF, WER1, WEREWOLF 1 0.218 -0.145
30 261772_at AT1G76240 unknown 0.218 -0.492
31 248443_at AT5G51310 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.214 0.075
32 249422_at AT5G39760 AtHB23, homeobox protein 23, HB23, homeobox protein 23, ZHD10, ZINC FINGER HOMEODOMAIN 10 0.212 0.014
33 250161_at AT5G15240 [Transmembrane amino acid transporter family protein] 0.209 0.102
34 265699_at AT2G03550 [alpha/beta-Hydrolases superfamily protein] 0.203 0.149
35 249211_at AT5G42680 unknown 0.197 0.295
36 252178_at AT3G50750 BEH1, BES1/BZR1 homolog 1 0.197 0.292
37 264157_at AT1G65310 ATXTH17, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17, XTH17, xyloglucan endotransglucosylase/hydrolase 17 0.194 -0.511
38 258091_at AT3G14560 unknown 0.192 -0.038
39 263380_at AT2G40200 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.189 -0.006
40 246235_at AT4G36830 HOS3-1 0.184 -0.168
41 246279_at AT4G36740 ATHB40, homeobox protein 40, HB-5, HB40, homeobox protein 40 0.182 0.007
42 253406_at AT4G32890 GATA9, GATA transcription factor 9 0.180 -0.081
43 252233_at AT3G49690 ATMYB84, MYB DOMAIN PROTEIN 84, MYB84, myb domain protein 84, RAX3, REGULATOR OF AXILLARY MERISTEMS3 0.180 -0.132
44 259104_at AT3G02170 LNG2, LONGIFOLIA2, TRM1, TON1 Recruiting Motif 1 0.178 -0.107
45 247646_at AT5G59990 [CCT motif family protein] 0.177 0.104
46 259793_at AT1G64380 [Integrase-type DNA-binding superfamily protein] 0.177 -0.139
47 258145_at AT3G18200 UMAMIT4, Usually multiple acids move in and out Transporters 4 0.176 -0.618
48 254413_at AT4G21440 ATM4, A. THALIANA MYB 4, ATMYB102, MYB-like 102, MYB102, MYB102, MYB-like 102 0.174 -0.064
49 264210_at AT1G22640 ATMYB3, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3, MYB3, myb domain protein 3 0.172 0.042
50 247577_at AT5G61290 [Flavin-binding monooxygenase family protein] 0.168 -0.001
51 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] 0.168 -0.094
52 252212_at AT3G50310 MAPKKK20, mitogen-activated protein kinase kinase kinase 20, MKKK20, MAPKK kinase 20 0.167 -0.084
53 257643_at AT3G25730 EDF3, ethylene response DNA binding factor 3 0.167 -0.179
54 256093_at AT1G20823 [RING/U-box superfamily protein] 0.167 -0.042
55 245362_at AT4G17460 HAT1, JAB, JAIBA 0.167 -0.226
56 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 0.166 -0.390
57 252582_at AT3G45530 [Cysteine/Histidine-rich C1 domain family protein] 0.166 -0.039
58 264697_at AT1G70210 ATCYCD1;1, CYCD1;1, CYCLIN D1;1 0.166 -0.093
59 248681_at AT5G48900 [Pectin lyase-like superfamily protein] 0.164 -0.042
60 254564_at AT4G19170 CCD4, carotenoid cleavage dioxygenase 4, NCED4, nine-cis-epoxycarotenoid dioxygenase 4 0.163 0.238
61 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] 0.162 -0.220
62 245276_at AT4G16780 ATHB-2, homeobox protein 2, ATHB2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2, HAT4, HB-2, homeobox protein 2 0.162 0.166
63 246487_at AT5G16030 unknown 0.160 0.194
64 245593_at AT4G14550 IAA14, indole-3-acetic acid inducible 14, SLR, SOLITARY ROOT 0.160 -0.220
65 251575_at AT3G58120 ATBZIP61, BZIP61 0.159 -0.166
66 249435_at AT5G39970 [catalytics] 0.158 -0.297
67 261037_at AT1G17420 ATLOX3, Arabidopsis thaliana lipoxygenase 3, LOX3, lipoxygenase 3 0.158 0.000
68 265443_at AT2G20750 ATEXPB1, expansin B1, ATHEXP BETA 1.5, EXPB1, expansin B1 0.156 -0.403
69 249185_at AT5G43030 [Cysteine/Histidine-rich C1 domain family protein] 0.156 -0.242
70 254326_at AT4G22610 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.154 0.055
71 250045_at AT5G17700 [MATE efflux family protein] 0.154 -0.414
72 245080_at AT2G23300 [Leucine-rich repeat protein kinase family protein] 0.152 -0.239
73 246011_at AT5G08330 AtTCP11, TCP11, TCP domain protein 11 0.151 -0.012
74 246885_at AT5G26230 MAKR1, membrane-associated kinase regulator 1 0.151 0.231
75 245586_at AT4G14980 [Cysteine/Histidine-rich C1 domain family protein] 0.149 0.011
76 250474_at AT5G10230 ANN7, ANNEXIN 7, ANNAT7, annexin 7 0.149 -0.043
77 259822_at AT1G66230 AtMYB20, myb domain protein 20, MYB20, myb domain protein 20 0.148 0.069
78 248921_at AT5G45950 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.148 -0.361
79 262236_at AT1G48330 unknown 0.146 -0.305
80 259560_at AT1G21270 WAK2, wall-associated kinase 2 0.144 0.069
81 247452_at AT5G62430 CDF1, cycling DOF factor 1 0.139 0.052
82 265924_at AT2G18620 [Terpenoid synthases superfamily protein] 0.138 -0.193
83 262850_at AT1G14920 GAI, GIBBERELLIC ACID INSENSITIVE, RGA2, RESTORATION ON GROWTH ON AMMONIA 2 0.138 0.090
84 259329_at AT3G16360 AHP4, HPT phosphotransmitter 4 0.136 0.128
85 256010_at AT1G19220 ARF11, AUXIN RESPONSE FACTOR11, ARF19, auxin response factor 19, IAA22, indole-3-acetic acid inducible 22 0.134 0.003
86 266331_at AT2G01570 RGA, REPRESSOR OF GA, RGA1, REPRESSOR OF GA1-3 1 0.134 0.062
87 245439_at AT4G16670 unknown 0.133 0.038
88 248371_at AT5G51810 AT2353, ATGA20OX2, GA20OX2, gibberellin 20 oxidase 2 -1.142 0.130
89 250611_at AT5G07200 ATGA20OX3, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3, GA20OX3, gibberellin 20-oxidase 3, YAP169 -0.695 -0.044
90 261866_at AT1G50420 SCL-3, SCARECROW-LIKE 3, SCL3, scarecrow-like 3 -0.610 0.082
91 261768_at AT1G15550 ATGA3OX1, ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1, GA3OX1, gibberellin 3-oxidase 1, GA4, GA REQUIRING 4 -0.548 -0.233
92 254065_at AT4G25420 AT2301, ATGA20OX1, ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1, GA20OX1, GA5, GA REQUIRING 5 -0.546 -0.583
93 251200_at AT3G63010 ATGID1B, GID1B, GA INSENSITIVE DWARF1B -0.509 -0.101
94 248153_at AT5G54250 ATCNGC4, cyclic nucleotide-gated cation channel 4, CNGC4, cyclic nucleotide-gated cation channel 4, DND2, DEFENSE, NO DEATH 2, HLM1 -0.463 0.053
95 250927_at AT5G03270 LOG6, LONELY GUY 6 -0.454 0.060
96 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 -0.450 -0.640
97 254200_at AT4G24110 unknown -0.447 0.062
98 260567_at AT2G43820 ATSAGT1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, GT, SAGT1, salicylic acid glucosyltransferase 1, SGT1, UDP-glucose:salicylic acid glucosyltransferase 1, UGT74F2, UDP-glucosyltransferase 74F2 -0.435 0.156
99 255285_at AT4G04630 unknown -0.421 0.414
100 250054_at AT5G17860 CAX7, calcium exchanger 7 -0.400 -0.022
101 266479_at AT2G31160 LSH3, LIGHT SENSITIVE HYPOCOTYLS 3, OBO1, ORGAN BOUNDARY 1 -0.390 0.108
102 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] -0.386 -0.061
103 249288_at AT5G41050 [Pollen Ole e 1 allergen and extensin family protein] -0.385 0.166
104 263829_at AT2G40435 unknown -0.361 -0.007
105 259302_at AT3G05120 ATGID1A, GA INSENSITIVE DWARF1A, GID1A, GA INSENSITIVE DWARF1A -0.359 0.109
106 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 -0.358 -0.015
107 248114_at AT5G55370 [MBOAT (membrane bound O-acyl transferase) family protein] -0.357 0.044
108 250907_at AT5G03670 TRM28, TON1 Recruiting Motif 28 -0.357 -0.231
109 252911_at AT4G39510 CYP96A12, cytochrome P450, family 96, subfamily A, polypeptide 12 -0.352 0.115
110 255900_at AT1G17830 unknown -0.352 0.172
111 247212_at AT5G65040 unknown -0.350 -0.118
112 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI -0.342 -0.088
113 247013_at AT5G67480 ATBT4, BT4, BTB and TAZ domain protein 4 -0.339 0.495
114 264931_at AT1G60590 [Pectin lyase-like superfamily protein] -0.338 0.015
115 250396_at AT5G10970 [C2H2 and C2HC zinc fingers superfamily protein] -0.334 -0.176
116 251443_at AT3G59940 KFB50, Kelch repeat F-box 50, KMD4, KISS ME DEADLY 4 -0.328 0.075
117 249642_at AT5G36960 unknown -0.328 0.119
118 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.327 0.274
119 245628_at AT1G56650 ATMYB75, MYB DOMAIN PROTEIN 75, MYB75, MYELOBLASTOSIS PROTEIN 75, PAP1, production of anthocyanin pigment 1, SIAA1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 -0.321 -0.174
120 263436_at AT2G28690 unknown -0.320 0.007
121 263325_at AT2G04240 XERICO -0.318 0.032
122 257467_at AT1G31320 LBD4, LOB domain-containing protein 4 -0.318 -0.165
123 257547_at AT3G13000 unknown -0.316 -0.021
124 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) -0.313 0.160
125 248756_at AT5G47560 ATSDAT, ATTDT, TONOPLAST DICARBOXYLATE TRANSPORTER, TDT, tonoplast dicarboxylate transporter -0.311 -0.079
126 262281_at AT1G68570 AtNPF3.1, NPF3.1, NRT1/ PTR family 3.1 -0.310 0.420
127 247005_at AT5G67520 adenosine-5'-phosphosulfate (APS) kinase 4 -0.303 -0.248
128 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 -0.303 0.141
129 245253_at AT4G15440 CYP74B2, HPL1, hydroperoxide lyase 1 -0.301 -0.014
130 252924_at AT4G39070 BBX20, B-box domain protein 20, BZS1, BZS1 -0.295 0.182
131 267477_at AT2G02710 PLP, PAS/LOV PROTEIN, PLPA, PAS/LOV PROTEIN A, PLPB, PAS/LOV protein B, PLPC, PAS/LOV PROTEIN C -0.291 -0.011
132 257672_at AT3G20300 unknown -0.283 0.054
133 251856_at AT3G54720 AMP1, ALTERED MERISTEM PROGRAM 1, AtAMP1, COP2, CONSTITUTIVE MORPHOGENESIS 2, HPT, HAUPTLING, MFO1, Multifolia, PT, PRIMORDIA TIMING -0.280 0.068
134 245501_at AT4G15620 [Uncharacterised protein family (UPF0497)] -0.280 0.251
135 256138_at AT1G48670 [auxin-responsive GH3 family protein] -0.279 0.035
136 267003_at AT2G34340 unknown -0.275 -0.067
137 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] -0.275 0.085
138 253911_at AT4G27300 [S-locus lectin protein kinase family protein] -0.271 0.029
139 247529_at AT5G61520 [Major facilitator superfamily protein] -0.267 0.215
140 258874_at AT3G03230 [alpha/beta-Hydrolases superfamily protein] -0.267 0.042
141 262096_at AT1G56010 anac021, Arabidopsis NAC domain containing protein 21, ANAC022, Arabidopsis NAC domain containing protein 22, NAC1, NAC domain containing protein 1 -0.267 -0.185
142 249096_at AT5G43910 [pfkB-like carbohydrate kinase family protein] -0.267 0.014
143 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 -0.263 0.074
144 254954_at AT4G10910 unknown -0.263 0.138
145 249955_at AT5G18840 [Major facilitator superfamily protein] -0.261 0.100
146 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 -0.255 -0.385
147 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 -0.253 -0.185
148 253940_at AT4G26950 unknown -0.251 0.027
149 262529_at AT1G17250 AtRLP3, receptor like protein 3, RFO2, RESISTANCE TO FUSARIUM OXYSPORUM 2, RLP3, receptor like protein 3 -0.251 -0.052
150 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 -0.250 -0.027
151 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.246 -0.046
152 253774_at AT4G28530 anac074, NAC domain containing protein 74, NAC074, NAC domain containing protein 74 -0.246 -0.461
153 266291_at AT2G29320 [NAD(P)-binding Rossmann-fold superfamily protein] -0.245 0.019
154 253088_at AT4G36220 CYP84A1, CYTOCHROME P450 84A1, FAH1, ferulic acid 5-hydroxylase 1 -0.242 0.283
155 245341_at AT4G16447 unknown -0.235 0.141
156 247946_at AT5G57180 CIA2, chloroplast import apparatus 2 -0.233 0.121
157 260601_at AT1G55910 ZIP11, zinc transporter 11 precursor -0.233 -0.136
158 246932_at AT5G25190 ESE3, ethylene and salt inducible 3 -0.232 0.295
159 265672_at AT2G31980 AtCYS2, PHYTOCYSTATIN 2, CYS2, PHYTOCYSTATIN 2 -0.221 -0.016
160 267423_at AT2G35060 KUP11, K+ uptake permease 11 -0.220 -0.043
161 247052_at AT5G66700 ATHB53, ARABIDOPSIS THALIANA HOMEOBOX 53, HB-8, HOMEOBOX-8, HB53, homeobox 53 -0.219 0.388
162 253525_at AT4G31330 unknown -0.219 0.173
163 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 -0.219 -0.164
164 260883_at AT1G29270 unknown -0.218 0.553
165 260053_at AT1G78120 TPR12, tetratricopeptide repeat 12 -0.217 -0.081
166 248759_at AT5G47610 [RING/U-box superfamily protein] -0.217 0.233
167 264083_at AT2G31230 ATERF15, ethylene-responsive element binding factor 15, ERF15, ethylene-responsive element binding factor 15 -0.214 0.066
168 253722_at AT4G29190 AtC3H49, AtOZF2, Arabidopsis thaliana oxidation-related zinc finger 2, AtTZF3, OZF2, oxidation-related zinc finger 2, TZF3, tandem zinc finger 3 -0.212 0.110
169 267084_at AT2G41180 SIB2, sigma factor binding protein 2 -0.210 -0.094
170 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 -0.209 0.125
171 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A -0.208 0.069
172 264898_at AT1G23205 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.207 -0.040
173 255927_at AT1G12630 [Integrase-type DNA-binding superfamily protein] -0.204 0.023