4.0:Information of module
21h-DC3000 hrpA
In comparison with 4h decapitation help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 1.330e-54
GO:0032259 methylation BP 4.902e-47
GO:0043414 macromolecule methylation BP 8.045e-47
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009694 jasmonic acid metabolic process BP 7.729e-12
GO:0009695 jasmonic acid biosynthetic process BP 4.609e-10
GO:0009753 response to jasmonic acid BP 2.570e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
21h-DC3000 hrpA		 Log2 signal ratio
4h decapitation
1 258034_at AT3G21300 [RNA methyltransferase family protein] 0.222 0.251
2 256675_at AT3G52170 [DNA binding] 0.180 0.230
3 263039_at AT1G23280 [MAK16 protein-related] 0.173 0.268
4 266598_at AT2G46110 KPHMT1, ketopantoate hydroxymethyltransferase 1, PANB1 0.173 0.069
5 247056_at AT5G66750 ATDDM1, CHA1, CHR01, CHROMATIN REMODELING 1, CHR1, chromatin remodeling 1, DDM1, DECREASED DNA METHYLATION 1, SOM1, SOMNIFEROUS 1, SOM4 0.164 0.375
6 247197_at AT5G65240 [Leucine-rich repeat protein kinase family protein] 0.162 0.109
7 254043_at AT4G25990 CIL 0.161 -0.027
8 251256_at AT3G62300 unknown 0.153 0.133
9 266957_at AT2G34640 HMR, HEMERA, PTAC12, plastid transcriptionally active 12, TAC12 0.153 0.200
10 256284_at AT3G12530 PSF2 0.151 0.106
11 248984_at AT5G45140 NRPC2, nuclear RNA polymerase C2 0.145 0.153
12 258589_at AT3G04290 ATLTL1, LTL1, Li-tolerant lipase 1 0.143 0.015
13 260826_at AT1G06710 MTSF1, mitochondrial stability factor 1 0.141 0.090
14 256781_at AT3G13650 [Disease resistance-responsive (dirigent-like protein) family protein] 0.140 0.404
15 263679_at AT1G59990 EMB3108, EMBRYO DEFECTIVE 3108, HS3, HEAVY SEED 3, RH22, RNA helicase 22 0.133 0.203
16 252625_at AT3G44750 ATHD2A, HD2A, HISTONE DEACETYLASE 2A, HDA3, histone deacetylase 3, HDT1 0.130 0.294
17 266668_at AT2G29760 OTP81, ORGANELLE TRANSCRIPT PROCESSING 81 0.126 0.369
18 251956_at AT3G53460 CP29, chloroplast RNA-binding protein 29 0.125 0.015
19 251476_at AT3G59670 unknown 0.124 0.208
20 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 0.123 -0.005
21 247032_at AT5G67240 SDN3, small RNA degrading nuclease 3 0.123 0.089
22 256288_at AT3G12270 ATPRMT3, ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 3, PRMT3, protein arginine methyltransferase 3 0.122 0.298
23 265895_at AT2G15000 unknown 0.120 0.173
24 253492_at AT4G31810 [ATP-dependent caseinolytic (Clp) protease/crotonase family protein] 0.119 0.261
25 259172_at AT3G03630 CS26, cysteine synthase 26 0.118 0.308
26 264560_at AT1G55820 unknown 0.118 0.212
27 247643_at AT5G60450 ARF4, auxin response factor 4 0.114 0.065
28 245174_at AT2G47500 [P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain] 0.113 0.327
29 247362_at AT5G63140 ATPAP29, purple acid phosphatase 29, PAP29, PAP29, purple acid phosphatase 29 0.112 0.112
30 249826_at AT5G23310 FSD3, Fe superoxide dismutase 3 0.110 0.168
31 256862_at AT3G23940 [dehydratase family] 0.107 0.206
32 259680_at AT1G77690 LAX3, like AUX1 3 0.107 0.176
33 256027_at AT1G34160 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.103 0.250
34 246303_at AT3G51870 [Mitochondrial substrate carrier family protein] 0.103 0.307
35 251935_at AT3G54090 FLN1, fructokinase-like 1 0.103 0.251
36 266612_at AT2G14860 [Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein] 0.101 0.207
37 251833_at AT3G55160 unknown 0.100 0.166
38 259690_at AT1G63160 EMB2811, EMBRYO DEFECTIVE 2811, RFC2, replication factor C 2 0.100 0.155
39 258089_at AT3G14740 [RING/FYVE/PHD zinc finger superfamily protein] 0.099 0.363
40 260779_at AT1G14650 [SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein] 0.098 0.022
41 263435_at AT2G28600 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.098 0.217
42 266687_at AT2G19670 ATPRMT1A, ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1A, PRMT1A, protein arginine methyltransferase 1A 0.097 0.398
43 259286_at AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein -1.292 -0.036
44 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 -0.641 -0.037
45 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 -0.384 -0.276
46 254447_at AT4G20860 [FAD-binding Berberine family protein] -0.293 -0.064
47 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -0.244 -0.414
48 247866_at AT5G57550 XTH25, xyloglucan endotransglucosylase/hydrolase 25, XTR3, xyloglucan endotransglycosylase 3 -0.216 -0.135
49 250589_at AT5G07700 AtMYB76, myb domain protein 76, MYB76, myb domain protein 76 -0.205 0.006
50 256017_at AT1G19180 AtJAZ1, JAZ1, jasmonate-zim-domain protein 1, TIFY10A -0.201 0.187
51 263032_at AT1G23850 unknown -0.189 -0.017
52 247175_at AT5G65280 GCL1, GCR2-like 1 -0.179 0.024
53 261443_at AT1G28480 GRX480, roxy19 -0.174 0.040
54 245640_at AT1G25330 CES, CESTA, HAF, HALF FILLED -0.171 -0.005
55 250881_at AT5G04080 unknown -0.163 -0.175
56 262416_at AT1G49390 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.160 0.056
57 264052_at AT2G22330 CYP79B3, cytochrome P450, family 79, subfamily B, polypeptide 3 -0.153 0.114
58 266661_at AT2G25820 ESE2, ethylene and salt inducible 2 -0.150 0.100
59 259548_at AT1G35260 MLP165, MLP-like protein 165 -0.147 0.032
60 261065_at AT1G07500 SMR5, SIAMESE-RELATED 5 -0.146 0.093
61 252827_at AT4G39950 CYP79B2, cytochrome P450, family 79, subfamily B, polypeptide 2 -0.146 0.194
62 257154_at AT3G27210 unknown -0.143 -0.067
63 246620_at AT5G36220 CYP81D1, cytochrome P450, family 81, subfamily D, polypeptide 1, CYP91A1, CYTOCHROME P450 91A1 -0.142 -0.399
64 246333_at AT3G44840 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.140 0.095
65 248898_at AT5G46370 ATKCO2, CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2, ATTPK2, TANDEM PORE K+ CHANNEL 2, KCO2, Ca2+ activated outward rectifying K+ channel 2 -0.139 -0.052
66 260461_at AT1G10980 [Lung seven transmembrane receptor family protein] -0.136 0.543
67 267035_at AT2G38400 AGT3, alanine:glyoxylate aminotransferase 3 -0.132 -0.201
68 246876_at AT5G26140 ATLOG9, LOG9, LONELY GUY 9 -0.132 0.034
69 265802_at AT2G35733 unknown -0.127 0.052
70 259483_at AT1G43980 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.126 0.110
71 246197_at AT4G37010 CEN2, centrin 2 -0.125 -0.014
72 250633_at AT5G07460 ATMSRA2, ARABIDOPSIS THALIANA METHIONINE SULFOXIDE REDUCTASE 2, PMSR2, peptidemethionine sulfoxide reductase 2 -0.124 -0.022
73 264993_at AT1G67290 GLOX1, glyoxal oxidase 1 -0.120 0.017
74 255804_at AT4G10220 unknown -0.119 -0.040
75 251101_at AT5G01680 ATCHX26, ARABIDOPSIS THALIANA CATION/HYDROGEN EXCHANGER 26, CHX26, cation/H+ exchanger 26 -0.118 0.035
76 248345_at AT5G52290 SHOC1, SHORTAGE IN CHIASMATA 1 -0.116 0.078
77 257364_at AT2G45940 unknown -0.113 -0.072
78 256006_at AT1G34070 unknown -0.111 -0.005
79 263103_at AT2G05290 unknown -0.110 0.019
80 257450_at AT1G10530 unknown -0.109 0.068
81 249509_at AT5G38390 [F-box/RNI-like superfamily protein] -0.109 -0.009
82 259708_at AT1G77420 [alpha/beta-Hydrolases superfamily protein] -0.107 -0.081
83 266723_at AT2G03190 ASK16, SKP1-like 16, SK16, SKP1-like 16 -0.107 -0.020