4.0:Information of module
ms35 silique stage 9.10
In comparison with Col0-PsmES4326-24hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010224 response to UV-B BP 2.196e-03
GO:0055114 oxidation-reduction process BP 4.018e-03
GO:0009684 indoleacetic acid biosynthetic process BP 4.329e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 4.448e-06
GO:0009750 response to fructose BP 7.239e-06
GO:0009746 response to hexose BP 3.959e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ms35 silique stage 9.10		 Log2 signal ratio
Col0-PsmES4326-24hpi
1 261264_at AT1G26710 unknown 1.598 0.062
2 262421_at AT1G50290 unknown 1.028 -0.071
3 251986_at AT3G53310 [AP2/B3-like transcriptional factor family protein] 0.916 -0.348
4 263023_at AT1G23960 unknown 0.838 0.155
5 249154_at AT5G43410 [Integrase-type DNA-binding superfamily protein] 0.798 0.241
6 262458_at AT1G11280 [S-locus lectin protein kinase family protein] 0.788 -0.298
7 248830_at AT5G47150 [YDG/SRA domain-containing protein] 0.683 0.165
8 246814_at AT5G27200 ACP5, acyl carrier protein 5 0.665 -0.099
9 246731_at AT5G27630 ACBP5, acyl-CoA binding protein 5, AtACBP5 0.652 0.078
10 247760_at AT5G59130 [Subtilase family protein] 0.596 -0.650
11 263258_at AT1G10540 ATNAT8, NAT8, nucleobase-ascorbate transporter 8 0.518 0.252
12 246870_at AT5G26030 ATFC-I, FC-I, FC1, ferrochelatase 1 0.496 0.225
13 248333_at AT5G52390 [PAR1 protein] 0.477 -0.150
14 253850_at AT4G28090 sks10, SKU5 similar 10 0.476 0.021
15 259100_at AT3G04880 DRT102, DNA-DAMAGE-REPAIR/TOLERATION 2 0.469 0.170
16 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.454 1.030
17 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 0.447 0.101
18 251808_at AT3G55480 AP-3 beta, beta-subunit of adaptor protein complex 3, PAT2, protein affected trafficking 2, WAT1, WEAK ACID TOLERANT 1 0.442 -0.023
19 250412_at AT5G11150 ATVAMP713, vesicle-associated membrane protein 713, VAMP713, VAMP713, vesicle-associated membrane protein 713 0.410 -0.131
20 254785_at AT4G12730 FLA2, FASCICLIN-like arabinogalactan 2 0.395 -0.824
21 261150_at AT1G19640 JMT, jasmonic acid carboxyl methyltransferase 0.395 0.607
22 249955_at AT5G18840 [Major facilitator superfamily protein] 0.358 0.068
23 261410_at AT1G07610 MT1C, metallothionein 1C 0.342 0.191
24 250530_at AT5G08630 [DDT domain-containing protein] 0.331 0.274
25 267032_at AT2G38490 CIPK22, CBL-interacting protein kinase 22, SnRK3.19, SNF1-RELATED PROTEIN KINASE 3.19 0.328 0.322
26 245653_at AT4G13985 FBD1, FBD-associated F-box protein 0.299 0.086
27 258764_at AT3G10720 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.294 -0.987
28 263708_at AT1G09320 [agenet domain-containing protein] 0.286 0.140
29 254416_at AT4G21380 ARK3, receptor kinase 3, RK3, receptor kinase 3 0.279 0.240
30 260872_at AT1G21350 [Thioredoxin superfamily protein] 0.272 -0.233
31 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] 0.252 -0.042
32 264577_at AT1G05260 RCI3, RARE COLD INDUCIBLE GENE 3, RCI3A 0.250 0.210
33 255502_at AT4G02410 AtLPK1, LecRK-IV.3, L-type lectin receptor kinase IV.3, LPK1, lectin-like protein kinase 1 0.247 0.191
34 254125_at AT4G24670 TAR2, tryptophan aminotransferase related 2 0.240 -0.575
35 250270_at AT5G12980 [Cell differentiation, Rcd1-like protein] 0.231 0.075
36 252363_at AT3G48460 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.231 -0.520
37 251752_at AT3G55740 ATPROT2, PROLINE TRANSPORTER 2, PROT2, proline transporter 2 0.228 0.127
38 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] -1.267 -0.064
39 261687_at AT1G47280 unknown -1.191 0.083
40 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein -1.158 1.072
41 266244_at AT2G27740 unknown -1.099 0.085
42 259783_at AT1G29510 SAUR67, SMALL AUXIN UPREGULATED RNA 67 -1.093 -1.150
43 265511_at AT2G05540 [Glycine-rich protein family] -0.988 0.110
44 252415_at AT3G47340 ASN1, glutamine-dependent asparagine synthase 1, AT-ASN1, ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1, DIN6, DARK INDUCIBLE 6 -0.940 0.813
45 256589_at AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 -0.929 0.071
46 249468_at AT5G39650 unknown -0.846 -0.017
47 258195_at AT3G13890 ATMYB26, myb domain protein 26, MS35, MALE STERILE 35, MYB26, myb domain protein 26 -0.813 0.087
48 265180_at AT1G23590 unknown -0.799 0.042
49 266196_at AT2G39110 [Protein kinase superfamily protein] -0.779 0.192
50 264433_at AT1G61810 BGLU45, beta-glucosidase 45 -0.753 1.328
51 258267_at AT3G15870 [Fatty acid desaturase family protein] -0.671 0.053
52 263020_at AT1G23880 [NHL domain-containing protein] -0.588 -0.240
53 255923_at AT1G22180 [Sec14p-like phosphatidylinositol transfer family protein] -0.580 0.700
54 245712_at AT5G04360 ATLDA, limit dextrinase, ATPU1, PULLULANASE 1, LDA, limit dextrinase, PU1, PULLULANASE 1 -0.570 -0.358
55 244961_at ATCG01040 YCF5 -0.509 -0.072
56 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 -0.494 0.154
57 260921_at AT1G21540 [AMP-dependent synthetase and ligase family protein] -0.492 -0.056
58 257896_at AT3G16920 ATCTL2, CTL2, chitinase-like protein 2 -0.480 0.084
59 245668_at AT1G28330 AtDRM1, DRM1, DORMANCY-ASSOCIATED PROTEIN 1, DYL1, dormancy-associated protein-like 1 -0.477 0.031
60 250892_at AT5G03760 ATCSLA09, ATCSLA9, CSLA09, CSLA9, CELLULOSE SYNTHASE LIKE A9, RAT4, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 -0.463 -0.834
61 260685_at AT1G17650 AtGLYR2, GLYR2, glyoxylate reductase 2, GR2, GLYOXYLATE REDUCTASE 2 -0.456 -0.752
62 264901_at AT1G23090 AST91, sulfate transporter 91, SULTR3;3 -0.439 0.303
63 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] -0.384 0.139
64 248977_at AT5G45020 [Glutathione S-transferase family protein] -0.380 -0.234
65 267265_at AT2G22980 SCPL13, serine carboxypeptidase-like 13 -0.379 -0.768
66 246512_at AT5G15630 COBL4, COBRA-LIKE4, IRX6, IRREGULAR XYLEM 6 -0.378 0.041
67 249626_at AT5G37540 [Eukaryotic aspartyl protease family protein] -0.373 0.318
68 250933_at AT5G03170 ATFLA11, ARABIDOPSIS FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 11, FLA11, FASCICLIN-like arabinogalactan-protein 11 -0.364 -0.158
69 264824_at AT1G03420 Sadhu4-2, sadhu non-coding retrotransposon 4-2 -0.363 -0.285
70 255061_at AT4G08930 APRL6, APR-like 6, ATAPRL6, APR-like 6 -0.362 0.117
71 257067_at AT3G18270 pseudogene -0.357 0.016
72 265350_at AT2G22620 [Rhamnogalacturonate lyase family protein] -0.355 0.085
73 250391_at AT5G10850 [similar to nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G01050.1)] -0.353 0.059