4.0:Information of module
mutant-line409
In comparison with Leafminer damaged seedlings help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0016192 vesicle-mediated transport BP 4.102e-07
GO:0048193 Golgi vesicle transport BP 2.120e-05
GO:0006891 intra-Golgi vesicle-mediated transport BP 3.054e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010224 response to UV-B BP 4.599e-05
GO:0009411 response to UV BP 1.712e-04
GO:0009416 response to light stimulus BP 1.296e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
mutant-line409		 Log2 signal ratio
Leafminer damaged seedlings
1 261946_at AT1G64560 0.438 0.025
2 251861_at AT3G54810 BME3, BLUE MICROPYLAR END 3, BME3-ZF, BLUE MICROPYLAR END 3-ZINC FINGER, GATA8, GATA TRANSCRIPTION FACTOR 8 0.230 0.081
3 263825_at AT2G40370 LAC5, laccase 5 0.223 0.046
4 255582_at AT4G01500 NGA4, NGATHA4 0.205 -0.032
5 244925_at ATMG00510 NAD7, NADH dehydrogenase subunit 7 0.198 0.014
6 250933_at AT5G03170 ATFLA11, ARABIDOPSIS FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 11, FLA11, FASCICLIN-like arabinogalactan-protein 11 0.193 -0.197
7 260246_at AT1G74220 unknown 0.191 -0.013
8 250962_at AT5G02990 [Galactose oxidase/kelch repeat superfamily protein] 0.181 -0.007
9 250567_at AT5G08090 unknown 0.179 -0.043
10 266943_at AT2G18820 [non-LTR retrotransposon family (LINE), has a 2.7e-38 P-value blast match to GB:NP_038607 L1 repeat, Tf subfamily, member 9 (LINE-element) (Mus musculus)] 0.178 0.033
11 250874_at AT5G04010 [F-box family protein] 0.175 -0.040
12 252462_at AT3G47250 unknown 0.174 -0.005
13 250782_at AT5G05490 AtREC8, DIF1, DETERMINATE, INFERTILE 1, REC8, SYN1, SYNAPTIC 1 0.172 0.023
14 262550_at AT1G31310 [hydroxyproline-rich glycoprotein family protein] 0.172 0.037
15 253222_at AT4G34850 LAP5, LESS ADHESIVE POLLEN 5, PSKB, polyketide synthase B 0.172 0.001
16 256521_at AT1G66120 AAE11, acyl-activating enzyme 11, AtAAE11 0.171 0.003
17 250649_at AT5G06690 WCRKC1, WCRKC thioredoxin 1 0.167 0.185
18 256860_at AT3G23840 CER26-LIKE, CER26-LIKE 0.162 -0.233
19 260642_at AT1G53260 [LOCATED IN: endomembrane system] 0.160 0.009
20 258596_at AT3G04510 LSH2, LIGHT SENSITIVE HYPOCOTYLS 2 0.159 -0.028
21 262981_at AT1G75590 SAUR52, SMALL AUXIN UPREGULATED RNA 52 0.157 -0.060
22 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) 0.156 0.055
23 251961_at AT3G53620 AtPPa4, pyrophosphorylase 4, PPa4, pyrophosphorylase 4 0.147 0.003
24 247165_at AT5G65790 ATMYB68, MYB DOMAIN PROTEIN 68, MYB68, myb domain protein 68 0.147 0.037
25 257462_at AT1G65740 UCL1, UPWARD CURLY LEAF1 0.142 -0.014
26 245680_at AT1G56570 PGN, PENTATRICOPEPTIDE REPEAT PROTEIN FOR GERMINATION ON NaCl 0.140 -0.050
27 259510_at AT1G43970 unknown 0.140 -0.012
28 247764_at AT5G59190 [subtilase family protein] 0.137 0.012
29 266883_at AT2G44810 DAD1, DEFECTIVE ANTHER DEHISCENCE 1 0.135 0.291
30 264825_at AT1G03720 [Cysteine proteinases superfamily protein] 0.135 -0.007
31 255765_at AT1G16760 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.135 -0.004
32 262864_at AT1G64920 [UDP-Glycosyltransferase superfamily protein] 0.134 -0.025
33 264358_at AT1G03180 unknown 0.132 0.027
34 251674_at AT3G57250 [Emsy N Terminus (ENT) domain-containing protein] 0.132 -0.054
35 251604_at AT3G57820 [pseudogene] 0.130 0.034
36 252257_at AT3G49440 [F-box associated ubiquitination effector family protein] 0.129 0.023
37 257077_at AT3G19690 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.128 -0.028
38 265780_at AT2G07380 [Mutator-like transposase family, has a 5.0e-62 P-value blast match to O22273 /233-373 Pfam PF03108 MuDR family transposase (MuDr-element domain)] 0.127 0.091
39 263965_at AT2G12870 [gypsy-like retrotransposon family, has a 3.8e-07 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] 0.125 0.040
40 245772_at AT1G30300 [Metallo-hydrolase/oxidoreductase superfamily protein] 0.124 0.253
41 260812_at AT1G43650 UMAMIT22, Usually multiple acids move in and out Transporters 22 0.122 -0.183
42 266142_at AT2G39030 NATA1, N-acetyltransferase activity 1 -0.603 1.150
43 248394_at AT5G52070 [Agenet domain-containing protein] -0.235 0.012
44 266284_at AT2G29190 APUM2, pumilio 2, PUM2, pumilio 2 -0.179 -0.122
45 258587_at AT3G04310 unknown -0.164 -0.183
46 248585_at AT5G49640 unknown -0.162 0.091
47 252227_at AT3G49900 [Phototropic-responsive NPH3 family protein] -0.156 -0.142
48 263684_at AT1G26900 [Pentatricopeptide repeat (PPR) superfamily protein] -0.156 0.016
49 266171_at AT2G38880 ATHAP3, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3, ATNF-YB1, NUCLEAR FACTOR Y SUBUNIT B1, HAP3, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3, HAP3A, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 3A, NF-YB1, nuclear factor Y, subunit B1 -0.154 0.146
50 245149_at AT2G47620 ATSWI3A, SWITCH/sucrose nonfermenting 3A, CHB1, SWI3A, SWITCH/sucrose nonfermenting 3A -0.148 0.015
51 258476_at AT3G02400 [SMAD/FHA domain-containing protein ] -0.145 -0.070
52 249865_at AT5G22820 [ARM repeat superfamily protein] -0.145 -0.203
53 254203_at AT4G24150 AtGRF8, growth-regulating factor 8, GRF8, growth-regulating factor 8 -0.144 -0.063
54 265276_at AT2G28400 unknown -0.144 0.875
55 254867_at AT4G12240 [zinc finger (C2H2 type) family protein] -0.137 0.004
56 255481_at AT4G02460 AtPMS1, PMS1, POSTMEIOTIC SEGREGATION 1 -0.136 -0.228
57 245276_at AT4G16780 ATHB-2, homeobox protein 2, ATHB2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2, HAT4, HB-2, homeobox protein 2 -0.127 0.122
58 261048_at AT1G01420 UGT72B3, UDP-glucosyl transferase 72B3 -0.125 -0.215
59 254821_at AT4G12540 unknown -0.116 -0.005
60 250725_at AT5G06400 [Pentatricopeptide repeat (PPR) superfamily protein] -0.113 -0.019
61 264129_at AT1G79170 unknown -0.112 -0.091
62 253057_at AT4G37670 NAGS2, N-acetyl-l-glutamate synthase 2 -0.109 -0.000
63 265909_at AT2G25720 unknown -0.108 0.073
64 257710_at AT3G27350 unknown -0.108 -0.275
65 252470_at AT3G46930 [Protein kinase superfamily protein] -0.107 0.496
66 262357_at AT1G73040 [Mannose-binding lectin superfamily protein] -0.106 -0.121
67 249271_at AT5G41790 CIP1, COP1-interactive protein 1 -0.105 -0.200
68 263572_at AT2G17060 [Disease resistance protein (TIR-NBS-LRR class) family] -0.102 0.043
69 253232_at AT4G34340 TAF8, TBP-associated factor 8 -0.100 0.013
70 254483_at AT4G20740 EMB3131, EMBRYO DEFECTIVE 3131 -0.098 -0.111
71 258033_at AT3G21250 ABCC8, ATP-binding cassette C8, ATMRP6, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, MRP6, multidrug resistance-associated protein 6 -0.097 -0.310
72 256623_at AT3G19960 ATM1, myosin 1 -0.096 -0.237
73 248938_at AT5G45780 [Leucine-rich repeat protein kinase family protein] -0.095 -0.073
74 251214_at AT3G62500 unknown -0.089 -0.040
75 261883_at AT1G80870 [Protein kinase superfamily protein] -0.086 -0.258
76 251453_at AT3G60070 [Major facilitator superfamily protein] -0.084 -0.119
77 245054_at AT2G26460 SMU2, SUPPRESSORS OF MEC-8 AND UNC-52 2 -0.082 0.011
78 250671_at AT5G06950 AHBP-1B, TGA2, TGACG sequence-specific binding protein 2 -0.080 -0.034
79 249521_at AT5G38690 [Zinc-finger domain of monoamine-oxidase A repressor R1 protein] -0.080 -0.040
80 247612_at AT5G60730 [Anion-transporting ATPase] -0.080 -0.031
81 257525_at AT3G04900 [Heavy metal transport/detoxification superfamily protein ] -0.078 0.036