4.0:Information of module
toc1-1-81hr
In comparison with hira-root help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0018958 phenol-containing compound metabolic pro... BP 4.238e-08
GO:0046189 phenol-containing compound biosynthetic ... BP 2.361e-07
GO:0009696 salicylic acid metabolic process BP 2.630e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010054 trichoblast differentiation BP 1.240e-16
GO:0010053 root epidermal cell differentiation BP 2.517e-16
GO:0010015 root morphogenesis BP 3.447e-16
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
toc1-1-81hr		 Log2 signal ratio
hira-root
1 256319_at AT1G35910 TPPD, trehalose-6-phosphate phosphatase D 0.393 -0.798
2 257185_at AT3G13100 ABCC7, ATP-binding cassette C7, ATMRP7, multidrug resistance-associated protein 7, MRP7, MRP7, multidrug resistance-associated protein 7 0.360 -0.392
3 254252_at AT4G23310 CRK23, cysteine-rich RLK (RECEPTOR-like protein kinase) 23 0.314 -0.022
4 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 0.300 -0.029
5 248460_at AT5G50915 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.295 -0.131
6 264001_at AT2G22420 [Peroxidase superfamily protein] 0.285 -0.282
7 264223_s_at AT3G16030 CES101, CALLUS EXPRESSION OF RBCS 101, RFO3, RESISTANCE TO FUSARIUM OXYSPORUM 3 0.277 -0.076
8 249606_at AT5G37260 CIR1, CIRCADIAN 1, RVE2, REVEILLE 2 0.262 -0.072
9 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 0.259 -0.033
10 254735_at AT4G13810 AtRLP47, receptor like protein 47, RLP47, receptor like protein 47 0.254 -0.047
11 254639_at AT4G18750 DOT4, DEFECTIVELY ORGANIZED TRIBUTARIES 4 0.242 0.031
12 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 0.225 -0.541
13 264766_at AT1G61420 [S-locus lectin protein kinase family protein] 0.224 0.072
14 263584_at AT2G17040 anac036, NAC domain containing protein 36, NAC036, NAC domain containing protein 36 0.219 -0.379
15 265047_at AT1G51960 IQD27, IQ-domain 27 0.213 -0.054
16 253514_at AT4G31805 POLAR, POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION 0.212 -0.125
17 266464_at AT2G47800 ABCC4, ATP-binding cassette C4, ATMRP4, multidrug resistance-associated protein 4, EST3, MRP4, multidrug resistance-associated protein 4 0.208 -0.093
18 248938_at AT5G45780 [Leucine-rich repeat protein kinase family protein] 0.202 -0.223
19 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.196 0.041
20 254112_at AT4G24970 [Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein] 0.191 -0.178
21 251778_at AT3G55660 ATROPGEF6, ROPGEF6, ROP (rho of plants) guanine nucleotide exchange factor 6 0.183 0.013
22 267546_at AT2G32680 AtRLP23, receptor like protein 23, RLP23, receptor like protein 23 0.182 -0.120
23 256483_at AT1G31410 ENF2, ENLARGED FIL EXPRESSION DOMAIN 2 0.182 -0.108
24 245673_at AT1G56690 [Pentatricopeptide repeat (PPR) superfamily protein] 0.179 0.159
25 262507_at AT1G11330 [S-locus lectin protein kinase family protein] 0.171 -0.554
26 245738_at AT1G44130 [Eukaryotic aspartyl protease family protein] 0.159 -0.441
27 264588_at AT2G17730 NIP2, NEP-interacting protein 2 0.158 -0.069
28 259385_at AT1G13470 unknown 0.156 -0.094
29 247500_at AT5G61910 [DCD (Development and Cell Death) domain protein] 0.150 -0.088
30 249214_at AT5G42720 [Glycosyl hydrolase family 17 protein] 0.150 -0.030
31 253181_at AT4G35180 LHT7, LYS/HIS transporter 7 0.148 -0.396
32 260520_at AT1G51590 MANIB, ALPHA-MANNOSIDASE IB, MNS1, alpha-mannosidase 1 0.145 -0.038
33 250994_at AT5G02490 AtHsp70-2, Hsp70-2 0.143 -0.336
34 260697_at AT1G32530 [RING/U-box superfamily protein] 0.140 -0.223
35 249321_at AT5G40920 [pseudogene] 0.131 -0.444
36 261384_at AT1G05440 [C-8 sterol isomerases] 0.129 0.178
37 261980_at AT1G33820 unknown 0.126 -0.004
38 260125_at AT1G36390 [Co-chaperone GrpE family protein] 0.122 0.028
39 258687_at AT3G07860 [Ubiquitin-like superfamily protein] 0.118 -0.018
40 255893_at AT1G17960 [Threonyl-tRNA synthetase] 0.116 -0.569
41 267096_at AT2G38180 [SGNH hydrolase-type esterase superfamily protein] 0.116 -0.150
42 250177_at AT5G14420 RGLG2, RING domain ligase2 0.115 -0.263
43 247850_at AT5G58150 [Leucine-rich repeat protein kinase family protein] 0.115 -0.006
44 261294_at AT1G48430 [Dihydroxyacetone kinase] 0.115 -0.073
45 254249_at AT4G23280 CRK20, cysteine-rich RLK (RECEPTOR-like protein kinase) 20 0.113 -0.034
46 263135_at AT1G78550 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.113 0.047
47 265516_at AT2G06110 [gypsy-like retrotransposon family (Athila), has a 6.4e-72 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 0.113 -0.045
48 261157_at AT1G34510 [Peroxidase superfamily protein] -0.940 0.498
49 262658_at AT1G14220 [Ribonuclease T2 family protein] -0.697 0.711
50 250157_at AT5G15180 [Peroxidase superfamily protein] -0.617 0.801
51 248252_at AT5G53250 AGP22, arabinogalactan protein 22, ATAGP22, ARABINOGALACTAN PROTEIN 22 -0.583 0.159
52 247914_at AT5G57540 AtXTH13, XTH13, xyloglucan endotransglucosylase/hydrolase 13 -0.580 0.292
53 260758_at AT1G48930 AtGH9C1, glycosyl hydrolase 9C1, GH9C1, glycosyl hydrolase 9C1 -0.562 0.221
54 256736_at AT3G29410 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.556 0.244
55 253957_at AT4G26320 AGP13, arabinogalactan protein 13 -0.540 0.337
56 261099_at AT1G62980 ATEXP18, ATEXPA18, expansin A18, ATHEXP ALPHA 1.25, EXP18, EXPANSIN 18, EXPA18, expansin A18 -0.524 0.330
57 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.480 0.235
58 267409_at AT2G34910 unknown -0.422 0.248
59 266669_at AT2G29750 UGT71C1, UDP-glucosyl transferase 71C1 -0.419 0.416
60 252172_at AT3G50640 unknown -0.400 0.300
61 253103_at AT4G36110 SAUR9, SMALL AUXIN UPREGULATED RNA 9 -0.396 -0.262
62 259964_at AT1G53680 ATGSTU28, glutathione S-transferase TAU 28, GSTU28, glutathione S-transferase TAU 28 -0.393 0.368
63 247094_at AT5G66280 GMD1, GDP-D-mannose 4,6-dehydratase 1 -0.383 0.445
64 250683_x_at AT5G06640 EXT10, extensin 10 -0.382 0.070
65 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 -0.381 0.296
66 258745_at AT3G05920 [Heavy metal transport/detoxification superfamily protein ] -0.380 0.213
67 267191_at AT2G44110 ATMLO15, MILDEW RESISTANCE LOCUS O 15, MLO15, MILDEW RESISTANCE LOCUS O 15 -0.379 0.400
68 248652_at AT5G49270 COBL9, COBRA-LIKE 9, DER9, DEFORMED ROOT HAIRS 9, MRH4, MUTANT ROOT HAIR 4, SHV2, SHAVEN 2 -0.368 0.305
69 251842_at AT3G54580 [Proline-rich extensin-like family protein] -0.362 0.316
70 257026_at AT3G19200 unknown -0.360 -0.343
71 249686_at AT5G36140 CYP716A2, cytochrome P450, family 716, subfamily A, polypeptide 2 -0.360 0.372
72 248626_at AT5G48940 [Leucine-rich repeat transmembrane protein kinase family protein] -0.357 -0.018
73 262349_at AT2G48130 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.357 0.232
74 260582_at AT2G47200 unknown -0.357 0.191
75 266920_at AT2G45750 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.356 0.213
76 267582_at AT2G41970 [Protein kinase superfamily protein] -0.353 0.335
77 245593_at AT4G14550 IAA14, indole-3-acetic acid inducible 14, SLR, SOLITARY ROOT -0.344 0.045
78 262915_at AT1G59940 ARR3, response regulator 3 -0.339 0.320
79 255105_at AT4G08620 SULTR1;1, sulphate transporter 1;1 -0.336 0.042
80 265155_at AT1G30990 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.331 0.196
81 247717_at AT5G59320 LTP3, lipid transfer protein 3 -0.319 -0.360
82 249773_at AT5G24140 SQP2, squalene monooxygenase 2 -0.305 0.267
83 262317_at AT2G48140 EDA4, embryo sac development arrest 4 -0.304 0.131
84 245889_at AT5G09480 [hydroxyproline-rich glycoprotein family protein] -0.303 0.182
85 264643_at AT1G08990 GUX5, Glucuronic Acid Substitution of Xylan 5, PGSIP5, plant glycogenin-like starch initiation protein 5 -0.300 0.216
86 266820_at AT2G44940 [Integrase-type DNA-binding superfamily protein] -0.299 0.249
87 260234_at AT1G74460 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.286 0.199
88 258912_at AT3G06460 [GNS1/SUR4 membrane protein family] -0.276 0.504
89 264261_at AT1G09240 ATNAS3, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 3, NAS3, nicotianamine synthase 3 -0.276 -0.114
90 258145_at AT3G18200 UMAMIT4, Usually multiple acids move in and out Transporters 4 -0.273 0.577
91 266965_at AT2G39510 UMAMIT14, Usually multiple acids move in and out Transporters 14 -0.271 0.437
92 248163_at AT5G54510 DFL1, DWARF IN LIGHT 1, GH3.6, Gretchen Hagen3.6 -0.262 -0.097
93 266708_at AT2G03200 [Eukaryotic aspartyl protease family protein] -0.260 0.105