4.0:Information of module
toc1-1-61hr
In comparison with Light help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0045333 cellular respiration BP 6.452e-05
GO:0015980 energy derivation by oxidation of organi... BP 1.557e-04
GO:0009658 chloroplast organization BP 1.704e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009825 multidimensional cell growth BP 1.054e-05
GO:0016036 cellular response to phosphate starvatio... BP 4.287e-04
GO:0043473 pigmentation BP 9.032e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
toc1-1-61hr		 Log2 signal ratio
Light
1 244939_at ATCG00065 RPS12, RIBOSOMAL PROTEIN S12, RPS12A, ribosomal protein S12A 0.445 0.004
2 258349_at AT3G17609 HYH, HY5-homolog 0.378 0.069
3 250099_at AT5G17300 RVE1, REVEILLE 1 0.342 -0.006
4 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 0.273 -0.043
5 259120_at AT3G02240 GLV4, GOLVEN 4, RGF7, root meristem growth factor 7 0.267 0.032
6 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A 0.260 0.363
7 248611_at AT5G49520 ATWRKY48, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY48, WRKY DNA-binding protein 48 0.249 0.255
8 255254_at AT4G05030 [Copper transport protein family] 0.241 0.042
9 244995_at ATCG00150 ATPI 0.238 -0.068
10 252289_at AT3G49130 [SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein] 0.231 0.085
11 264756_at AT1G61370 [S-locus lectin protein kinase family protein] 0.226 0.192
12 258577_at AT3G04220 [Disease resistance protein (TIR-NBS-LRR class) family] 0.222 0.072
13 259927_at AT1G75100 JAC1, J-domain protein required for chloroplast accumulation response 1 0.210 -0.062
14 253942_at AT4G27010 EMB2788, EMBRYO DEFECTIVE 2788 0.204 -0.022
15 248911_at AT5G45830 ATDOG1, DOG1, DELAY OF GERMINATION 1, GAAS5, germination ability after storage 5, GSQ5, GLUCOSE SENSING QTL 5 0.199 -0.003
16 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 0.199 0.615
17 246079_at AT5G20450 unknown 0.196 -0.029
18 263222_at AT1G30640 [Protein kinase family protein] 0.191 0.014
19 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 0.188 0.012
20 245242_at AT1G44446 ATCAO, ARABIDOPSIS THALIANA CHLOROPHYLL A OXYGENASE, CAO, CHLOROPHYLL A OXYGENASE, CH1, CHLORINA 1 0.184 -0.043
21 258646_at AT3G08040 ATFRD3, FRD3, FERRIC REDUCTASE DEFECTIVE 3, MAN1, MANGANESE ACCUMULATOR 1 0.182 -0.030
22 264714_at AT1G69990 [Leucine-rich repeat protein kinase family protein] 0.182 -0.105
23 252754_at AT3G43510 [copia-like retrotransposon family, has a 2.3e-11 P-value blast match to GB:BAA11674 ORF(AA 1-1338) (Ty1_Copia-element) (Nicotiana tabacum)] 0.181 -0.013
24 266070_at AT2G18660 AtPNP-A, PNP-A, plant natriuretic peptide A 0.181 -0.024
25 257473_at AT1G33840 unknown 0.178 -0.043
26 255352_at AT4G03860 [transposon protein -related, similar to athila retroelement] 0.176 -0.007
27 267546_at AT2G32680 AtRLP23, receptor like protein 23, RLP23, receptor like protein 23 0.174 0.100
28 251672_at AT3G57230 AGL16, AGAMOUS-like 16 0.172 -0.032
29 265660_at AT2G25470 AtRLP21, receptor like protein 21, RLP21, receptor like protein 21 0.169 -0.080
30 266160_at AT2G28180 ATCHX8, CHX08, CHX8, CATION/H+ EXCHANGER 8 0.165 0.009
31 257592_at AT3G24982 ATRLP40, receptor like protein 40, RLP40, receptor like protein 40 0.165 -0.023
32 259172_at AT3G03630 CS26, cysteine synthase 26 0.163 -0.065
33 258996_at AT3G01800 [Ribosome recycling factor] 0.163 0.000
34 253485_at AT4G31800 ATWRKY18, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18, WRKY18, WRKY DNA-binding protein 18 0.162 0.231
35 263462_at AT2G31780 ARI11, ARIADNE 11, ATARI11, ARABIDOPSIS ARIADNE 11 0.161 0.038
36 259170_at AT3G03510 [Phototropic-responsive NPH3 family protein] 0.159 -0.071
37 245380_at AT4G17760 [damaged DNA binding] 0.156 0.013
38 252014_at AT3G52870 [IQ calmodulin-binding motif family protein] 0.154 0.052
39 260308_at AT1G70610 ABCB26, ATP-binding cassette B26, ATTAP1, transporter associated with antigen processing protein 1, TAP1, transporter associated with antigen processing protein 1 0.154 -0.010
40 267275_at AT2G30240 ATCHX13, CHX13, CATION/H+ EXCHANGER 13 0.150 -0.024
41 257768_at AT3G23060 [RING/U-box superfamily protein] 0.150 0.066
42 249323_at AT5G40940 FLA20, putative fasciclin-like arabinogalactan protein 20 0.149 -0.042
43 246840_at AT5G26610 [D111/G-patch domain-containing protein] 0.148 0.019
44 259230_at AT3G07780 OBE1, OBERON1 0.146 0.054
45 252640_at AT3G44560 FAR8, fatty acid reductase 8 0.146 0.002
46 245820_at AT1G26320 [Zinc-binding dehydrogenase family protein] 0.145 0.039
47 257234_at AT3G14880 unknown 0.145 -0.085
48 245142_at AT2G45270 GCP1, glycoprotease 1 0.143 0.027
49 259406_at AT1G17690 NOF1, nucleolar factor 1 0.143 0.044
50 247718_at AT5G59310 LTP4, lipid transfer protein 4 -0.824 0.014
51 252833_at AT4G40090 AGP3, arabinogalactan protein 3 -0.687 0.108
52 259766_at AT1G64360 unknown -0.570 0.069
53 257421_at AT1G12030 unknown -0.518 0.154
54 266766_at AT2G46880 ATPAP14, PAP14, purple acid phosphatase 14 -0.511 -0.015
55 262658_at AT1G14220 [Ribonuclease T2 family protein] -0.511 -0.009
56 263168_at AT1G03020 [Thioredoxin superfamily protein] -0.491 0.005
57 250515_at AT5G09570 [Cox19-like CHCH family protein] -0.422 0.003
58 246075_at AT5G20410 ATMGD2, ARABIDOPSIS THALIANA MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, MGD2, monogalactosyldiacylglycerol synthase 2 -0.398 -0.004
59 250437_at AT5G10430 AGP4, arabinogalactan protein 4, ATAGP4 -0.390 0.005
60 247765_at AT5G58860 CYP86, CYP86A1, cytochrome P450, family 86, subfamily A, polypeptide 1, HORST, hydroxylase of root suberized tissue -0.379 0.040
61 266353_at AT2G01520 MLP328, MLP-like protein 328, ZCE1, (Zusammen-CA)-enhanced 1 -0.373 -0.045
62 266649_at AT2G25810 TIP4;1, tonoplast intrinsic protein 4;1 -0.364 0.021
63 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.355 0.152
64 260582_at AT2G47200 unknown -0.340 0.037
65 255900_at AT1G17830 unknown -0.339 0.090
66 266591_at AT2G46225 ABIL1, ABI-1-like 1 -0.331 0.042
67 266320_at AT2G46640 TAC1, Tiller Angle Control 1 -0.324 0.011
68 261817_at AT1G08180 unknown -0.308 -0.191
69 245139_at AT2G45430 AHL22, AT-hook motif nuclear-localized protein 22 -0.290 -0.080
70 258765_at AT3G10710 RHS12, root hair specific 12 -0.289 -0.038
71 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 -0.280 0.083
72 263913_at AT2G36570 PXC1, PXY/TDR-correlated 1 -0.278 0.060
73 253317_at AT4G33960 unknown -0.271 -0.031
74 265539_at AT2G15830 unknown -0.271 0.006
75 250239_at AT5G13580 ABCG6, ATP-binding cassette G6 -0.270 0.014
76 264988_at AT1G27140 ATGSTU14, glutathione S-transferase tau 14, GST13, GLUTATHIONE S-TRANSFERASE 13, GSTU14, glutathione S-transferase tau 14 -0.263 0.119
77 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR -0.261 -0.000
78 264404_at AT2G25160 CYP82F1, cytochrome P450, family 82, subfamily F, polypeptide 1 -0.253 -0.011
79 259750_at AT1G71130 AtERF070, CRF8, cytokinin response factor 8, ERF070, ethylene response factor 70 -0.249 -0.125
80 249337_at AT5G41080 AtGDPD2, GDPD2, glycerophosphodiester phosphodiesterase 2 -0.244 0.084
81 258935_at AT3G10120 unknown -0.227 -0.029
82 249330_at AT5G40970 unknown -0.223 0.005
83 260819_at AT1G06850 AtbZIP52, basic leucine-zipper 52, bZIP52, basic leucine-zipper 52 -0.222 0.049
84 260220_at AT1G74650 ATMYB31, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 31, ATY13, MYB31, myb domain protein 31 -0.213 0.012
85 251961_at AT3G53620 AtPPa4, pyrophosphorylase 4, PPa4, pyrophosphorylase 4 -0.210 -0.045
86 266583_at AT2G46220 [Uncharacterized conserved protein (DUF2358)] -0.209 -0.028
87 261425_at AT1G18880 AtNPF2.9, NPF2.9, NRT1/ PTR family 2.9, NRT1.9, nitrate transporter 1.9 -0.203 0.054
88 256664_at AT3G12040 [DNA-3-methyladenine glycosylase (MAG)] -0.203 0.026
89 261056_at AT1G01360 PYL9, PYRABACTIN RESISTANCE 1-LIKE 9, RCAR1, regulatory component of ABA receptor 1 -0.198 -0.154
90 247586_at AT5G60660 PIP2;4, plasma membrane intrinsic protein 2;4, PIP2F -0.196 0.014
91 263495_at AT2G42530 COR15B, cold regulated 15b -0.195 -0.004
92 266340_at AT2G01480 [O-fucosyltransferase family protein] -0.194 0.010
93 255285_at AT4G04630 unknown -0.194 0.072
94 246781_at AT5G27350 SFP1 -0.193 0.020
95 264625_at AT1G09020 ATSNF4, SNF4, homolog of yeast sucrose nonfermenting 4 -0.181 -0.047
96 258856_at AT3G02040 AtGDPD1, GDPD1, Glycerophosphodiester phosphodiesterase 1, SRG3, senescence-related gene 3 -0.181 0.004
97 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 -0.180 0.001