4.0:Information of module
pip3 At2g19270 TDNA 9
In comparison with hen1 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1901700 response to oxygen-containing compound BP 3.191e-17
GO:0009719 response to endogenous stimulus BP 8.316e-12
GO:1901698 response to nitrogen compound BP 2.308e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016144 S-glycoside biosynthetic process BP 1.373e-14
GO:0019758 glycosinolate biosynthetic process BP 1.373e-14
GO:0019761 glucosinolate biosynthetic process BP 1.373e-14
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
pip3 At2g19270 TDNA 9		 Log2 signal ratio
hen1
1 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.739 -0.597
2 267330_at AT2G19270 unknown 0.684 -0.118
3 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 0.600 -0.335
4 267357_at AT2G40000 ATHSPRO2, ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, HSPRO2, ortholog of sugar beet HS1 PRO-1 2 0.494 -0.187
5 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] 0.398 -0.618
6 260287_at AT1G80440 KFB20, Kelch repeat F-box 20, KMD1, KISS ME DEADLY 1 0.397 -0.644
7 255160_at AT4G07820 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.397 -0.012
8 249923_at AT5G19120 [Eukaryotic aspartyl protease family protein] 0.379 -0.557
9 264379_at AT2G25200 unknown 0.378 -0.053
10 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 0.370 -0.288
11 267461_at AT2G33830 AtDRM2, DRM2, dormancy associated gene 2 0.360 -0.994
12 259015_at AT3G07350 unknown 0.353 -0.320
13 247799_at AT5G58840 [Subtilase family protein] 0.352 -0.033
14 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.350 -0.130
15 265387_at AT2G20670 unknown 0.340 -0.718
16 245757_at AT1G35140 EXL1, EXORDIUM like 1, PHI-1, PHOSPHATE-INDUCED 1 0.336 0.682
17 254954_at AT4G10910 unknown 0.335 -0.309
18 261265_at AT1G26800 [RING/U-box superfamily protein] 0.326 -0.318
19 245925_at AT5G28770 AtbZIP63, Arabidopsis thaliana basic leucine zipper 63, BZO2H3 0.309 -0.459
20 252250_at AT3G49790 [Carbohydrate-binding protein] 0.307 -0.464
21 252081_at AT3G51910 AT-HSFA7A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, HSFA7A, heat shock transcription factor A7A 0.301 -0.025
22 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.298 0.110
23 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] 0.293 -0.206
24 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H 0.292 0.060
25 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 0.287 -1.008
26 266072_at AT2G18700 ATTPS11, trehalose phosphatase/synthase 11, ATTPSB, TPS11, trehalose phosphatase/synthase 11, TPS11, TREHALOSE-6-PHOSPHATE SYNTHASE 11 0.285 -0.404
27 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 0.284 0.365
28 250099_at AT5G17300 RVE1, REVEILLE 1 0.284 -0.501
29 252483_at AT3G46600 [GRAS family transcription factor] 0.266 -0.019
30 264042_at AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 0.263 -0.225
31 258225_at AT3G15630 unknown 0.263 -0.750
32 262986_at AT1G23390 [Kelch repeat-containing F-box family protein] 0.262 -0.485
33 265478_at AT2G15890 MEE14, maternal effect embryo arrest 14 0.261 -0.941
34 247543_at AT5G61600 ERF104, ethylene response factor 104 0.250 -0.167
35 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.248 -0.092
36 254869_at AT4G11890 ARCK1, ABA- AND OSMOTIC-STRESS-INDUCIBLE RECEPTOR-LIKE CYTOSOLIC KINASE1, CRK45, cysteine-rich receptor-like protein kinase 45 0.246 -0.155
37 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] 0.245 -0.458
38 251356_at AT3G61060 AtPP2-A13, phloem protein 2-A13, PP2-A13, phloem protein 2-A13 0.242 -0.370
39 259987_at AT1G75030 ATLP-3, thaumatin-like protein 3, TLP-3, thaumatin-like protein 3 0.239 -0.367
40 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 0.239 -0.237
41 251195_at AT3G62930 [Thioredoxin superfamily protein] 0.236 -0.234
42 267385_at AT2G44380 [Cysteine/Histidine-rich C1 domain family protein] 0.235 -0.038
43 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.233 -0.052
44 250165_at AT5G15290 CASP5, Casparian strip membrane domain protein 5 0.233 -0.032
45 265724_at AT2G32100 ATOFP16, RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, OFP16, ovate family protein 16 0.232 -0.084
46 266259_at AT2G27830 unknown 0.227 -0.285
47 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 0.224 -0.574
48 262072_at AT1G59590 ZCF37 0.216 -0.091
49 258939_at AT3G10020 unknown 0.212 -0.626
50 264375_at AT2G25090 AtCIPK16, CIPK16, CBL-interacting protein kinase 16, SnRK3.18, SNF1-RELATED PROTEIN KINASE 3.18 0.211 -0.053
51 262656_at AT1G14200 [RING/U-box superfamily protein] 0.210 -0.255
52 255285_at AT4G04630 unknown 0.206 -0.114
53 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 0.206 0.068
54 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 0.198 -0.645
55 250478_at AT5G10250 DOT3, DEFECTIVELY ORGANIZED TRIBUTARIES 3 0.196 0.001
56 267028_at AT2G38470 ATWRKY33, WRKY DNA-BINDING PROTEIN 33, WRKY33, WRKY DNA-binding protein 33 0.194 -0.177
57 256914_at AT3G23880 [F-box and associated interaction domains-containing protein] 0.193 -0.435
58 260261_at AT1G68450 PDE337, PIGMENT DEFECTIVE 337 0.193 0.003
59 260266_at AT1G68520 BBX14, B-box domain protein 14 0.193 -0.305
60 254193_at AT4G23870 unknown 0.183 -0.352
61 259979_at AT1G76600 unknown 0.181 -0.051
62 248050_at AT5G56100 [glycine-rich protein / oleosin] 0.179 -0.198
63 258905_at AT3G06390 [Uncharacterised protein family (UPF0497)] 0.176 0.040
64 265511_at AT2G05540 [Glycine-rich protein family] 0.175 -0.465
65 249780_at AT5G24240 [Phosphatidylinositol 3- and 4-kinase ] -0.712 0.031
66 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 -0.514 -0.012
67 252238_at AT3G49960 [Peroxidase superfamily protein] -0.446 0.016
68 249934_at AT5G22410 RHS18, root hair specific 18 -0.393 -0.043
69 255516_at AT4G02270 RHS13, root hair specific 13 -0.347 0.013
70 248509_at AT5G50335 unknown -0.337 0.048
71 266364_at AT2G41230 ORS1, ORGAN SIZE RELATED 1 -0.336 -0.023
72 256352_at AT1G54970 ATPRP1, proline-rich protein 1, PRP1, proline-rich protein 1, RHS7, ROOT HAIR SPECIFIC 7 -0.335 0.010
73 261913_at AT1G65860 FMO GS-OX1, flavin-monooxygenase glucosinolate S-oxygenase 1 -0.334 0.666
74 257922_at AT3G23150 ETR2, ethylene response 2 -0.323 -0.123
75 261684_at AT1G47400 unknown -0.317 0.166
76 257460_at AT1G75580 SAUR51, SMALL AUXIN UPREGULATED RNA 51 -0.300 -0.127
77 247023_at AT5G67060 HEC1, HECATE 1 -0.291 0.033
78 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 -0.275 0.206
79 263498_at AT2G42610 LSH10, LIGHT SENSITIVE HYPOCOTYLS 10 -0.246 0.089
80 255773_at AT1G18590 ATSOT17, SULFOTRANSFERASE 17, ATST5C, ARABIDOPSIS SULFOTRANSFERASE 5C, SOT17, sulfotransferase 17 -0.246 0.345
81 253244_at AT4G34580 AtSFH1, COW1, CAN OF WORMS1, SRH1, SHORT ROOT HAIR 1 -0.236 -0.053
82 263653_at AT1G04310 ERS2, ethylene response sensor 2 -0.231 -0.115
83 245861_at AT5G28300 AtGT2L, GT2L, GT-2Like protein -0.230 -0.073
84 266326_at AT2G46650 ATCB5-C, ARABIDOPSIS CYTOCHROME B5 ISOFORM C, B5 #1, CB5-C, cytochrome B5 isoform C, CYTB5-C -0.229 0.235
85 252988_at AT4G38410 [Dehydrin family protein] -0.227 -0.001
86 251524_at AT3G58990 IPMI1, isopropylmalate isomerase 1 -0.226 0.320
87 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 -0.215 0.021
88 257026_at AT3G19200 unknown -0.212 -0.131
89 246550_at AT5G14920 GASA14, A-stimulated in Arabidopsis 14 -0.209 -0.027
90 245401_at AT4G17670 unknown -0.208 0.287
91 257021_at AT3G19710 BCAT4, branched-chain aminotransferase4 -0.208 0.544
92 247151_at AT5G65640 bHLH093, beta HLH protein 93 -0.207 -0.036
93 248820_at AT5G47060 unknown -0.206 0.100
94 262719_at AT1G43590 unknown -0.204 0.223
95 254687_at AT4G13770 CYP83A1, cytochrome P450, family 83, subfamily A, polypeptide 1, REF2, REDUCED EPIDERMAL FLUORESCENCE 2 -0.200 0.254
96 265121_at AT1G62560 FMO GS-OX3, flavin-monooxygenase glucosinolate S-oxygenase 3 -0.196 0.366
97 252870_at AT4G39940 AKN2, APS-kinase 2, APK2, ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 2 -0.194 0.182
98 267276_at AT2G30130 ASL5, LBD12, PCK1, PEACOCK 1 -0.186 0.009
99 259525_at AT1G12560 ATEXP7, ATEXPA7, expansin A7, ATHEXP ALPHA 1.26, EXP7, EXPA7, expansin A7 -0.185 0.032
100 247878_at AT5G57760 unknown -0.184 -0.061
101 247450_at AT5G62350 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.183 -0.059
102 256489_at AT1G31550 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.182 0.029
103 256873_at AT3G26310 CYP71B35, cytochrome P450, family 71, subfamily B, polypeptide 35 -0.182 0.157
104 255056_at AT4G09820 AtTT8, BHLH42, TT8, TRANSPARENT TESTA 8 -0.179 0.043
105 253763_at AT4G28850 ATXTH26, XTH26, xyloglucan endotransglucosylase/hydrolase 26 -0.179 0.005
106 251025_at AT5G02190 ATASP38, ARABIDOPSIS THALIANA ASPARTIC PROTEASE 38, EMB24, EMBRYO DEFECTIVE 24, PCS1, PROMOTION OF CELL SURVIVAL 1 -0.179 0.159
107 260957_at AT1G06080 ADS1, delta 9 desaturase 1, AtADS1 -0.178 -0.087
108 257456_at AT2G18120 SRS4, SHI-related sequence 4 -0.176 0.038
109 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 -0.176 0.399
110 267337_at AT2G39980 [HXXXD-type acyl-transferase family protein] -0.175 -0.238
111 245859_at AT5G28290 ATNEK3, NIMA-related kinase 3, NEK3, NIMA-related kinase 3 -0.170 0.200
112 250907_at AT5G03670 TRM28, TON1 Recruiting Motif 28 -0.169 0.046
113 263851_at AT2G04460 unknown -0.167 -0.012
114 254862_at AT4G12030 BASS5, BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5, BAT5, bile acid transporter 5 -0.166 0.356
115 260156_at AT1G52880 ANAC018, Arabidopsis NAC domain containing protein 18, ATNAM, NAM, NO APICAL MERISTEM, NARS2, NAC-REGULATED SEED MORPHOLOGY 2 -0.165 0.115
116 252661_at AT3G44450 unknown -0.164 0.382
117 259042_at AT3G03450 RGL2, RGA-like 2 -0.161 0.039
118 260237_at AT1G74430 ATMYB95, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 95, ATMYBCP66, ARABIDOPSIS THALIANA MYB DOMAIN CONTAINING PROTEIN 66, MYB95, myb domain protein 95 -0.160 0.010
119 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.158 -0.070
120 260429_at AT1G72450 JAZ6, jasmonate-zim-domain protein 6, TIFY11B, TIFY DOMAIN PROTEIN 11B -0.154 -0.053
121 257262_at AT3G21890 BBX31, B-box domain protein 31 -0.153 0.312
122 251586_at AT3G58070 GIS, GLABROUS INFLORESCENCE STEMS -0.153 -0.131
123 265545_at AT2G28250 NCRK -0.149 0.086
124 254534_at AT4G19680 ATIRT2, IRON REGULATED TRANSPORTER 2, IRT2, iron regulated transporter 2 -0.145 -0.001
125 261754_at AT1G76130 AMY2, alpha-amylase-like 2, ATAMY2, ARABIDOPSIS THALIANA ALPHA-AMYLASE-LIKE 2 -0.139 0.131
126 257517_at AT3G16330 unknown -0.139 0.300
127 264091_at AT1G79110 BRG2, BOI-related gene 2 -0.138 -0.095