4.0:Information of module
msh1 recA3 heat shock
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009560 embryo sac egg cell differentiation BP 1.274e-03
GO:0007292 female gamete generation BP 1.388e-03
GO:0019693 ribose phosphate metabolic process BP 1.741e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042546 cell wall biogenesis BP 1.428e-05
GO:0009753 response to jasmonic acid BP 7.671e-04
GO:0000165 MAPK cascade BP 9.568e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
msh1 recA3 heat shock		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 263402_at AT2G04050 [MATE efflux family protein] 0.850 0.091
2 266752_at AT2G47000 ABCB4, ATP-binding cassette B4, AtABCB4, ATPGP4, ARABIDOPSIS P-GLYCOPROTEIN 4, MDR4, MULTIDRUG RESISTANCE 4, PGP4, P-GLYCOPROTEIN 4 0.742 -0.075
3 250515_at AT5G09570 [Cox19-like CHCH family protein] 0.716 0.029
4 265237_s_at ATMG00470 ORF122A 0.711 -0.098
5 250090_at AT5G17330 GAD, glutamate decarboxylase, GAD1, GLUTAMATE DECARBOXYLASE 1 0.641 0.114
6 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 0.588 -0.032
7 256442_at AT3G10930 unknown 0.511 -0.041
8 247435_at AT5G62480 ATGSTU9, glutathione S-transferase tau 9, GST14, GLUTATHIONE S-TRANSFERASE 14, GST14B, GLUTATHIONE S-TRANSFERASE 14B, GSTU9, glutathione S-transferase tau 9 0.487 0.409
9 265668_at AT2G32020 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.450 -0.035
10 263401_at AT2G04070 [MATE efflux family protein] 0.410 -0.076
11 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.393 -0.043
12 265428_at AT2G20720 [Pentatricopeptide repeat (PPR) superfamily protein] 0.361 -0.029
13 265422_at AT2G20800 NDB4, NAD(P)H dehydrogenase B4 0.361 -0.009
14 257332_at ATMG01350 ORF145C 0.351 -0.136
15 256416_at AT3G11050 ATFER2, ferritin 2, FER2, ferritin 2 0.336 0.308
16 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.325 0.072
17 263061_at AT2G18190 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.301 0.126
18 258934_at AT3G10140 RECA3, RECA homolog 3 0.296 0.035
19 254419_at AT4G21490 NDB3, NAD(P)H dehydrogenase B3 0.293 0.105
20 264042_at AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 0.284 0.033
21 252539_at AT3G45730 unknown 0.267 -0.125
22 246461_at AT5G16930 [AAA-type ATPase family protein] 0.260 -0.089
23 244958_at ATMG00450 ORF106B 0.259 0.060
24 249983_at AT5G18470 [Curculin-like (mannose-binding) lectin family protein] 0.259 -0.076
25 265242_at AT2G07705 unknown 0.258 -0.101
26 262459_at AT1G50400 [Eukaryotic porin family protein] 0.243 0.037
27 257317_at ATMG01060 ORF107G 0.226 -0.098
28 257336_at ATMG01410 ORF204, open reading frame 204 0.223 0.130
29 262124_at AT1G59660 [Nucleoporin autopeptidase] 0.223 -0.097
30 257237_at AT3G14890 [phosphoesterase] 0.218 -0.180
31 263096_at AT2G16060 AHB1, hemoglobin 1, ARATH GLB1, ATGLB1, GLB1, CLASS I HEMOGLOBIN, HB1, hemoglobin 1, NSHB1 0.212 0.283
32 263707_at AT1G09300 [Metallopeptidase M24 family protein] 0.208 -0.044
33 255193_at AT4G07400 VFB3, VIER F-box proteine 3 0.207 -0.023
34 257401_at AT1G23550 SRO2, similar to RCD one 2 0.203 -0.311
35 260688_at AT1G17665 unknown 0.202 0.166
36 253019_at AT4G38010 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.201 -0.030
37 262180_at AT1G78050 PGM, phosphoglycerate/bisphosphoglycerate mutase 0.195 -0.358
38 244903_at ATMG00660 ORF149 0.193 -0.091
39 247707_at AT5G59450 [GRAS family transcription factor] 0.192 0.021
40 262624_at AT1G06450 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] 0.192 0.035
41 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 -0.427 0.037
42 261069_at AT1G07410 ATRAB-A2B, ARABIDOPSIS RAB GTPASE HOMOLOG A2B, ATRABA2B, RAB GTPase homolog A2B, RAB-A2B, RAB GTPASE HOMOLOG A2B, RABA2b, RAB GTPase homolog A2B -0.374 -0.065
43 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 -0.374 -0.003
44 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 -0.365 -0.020
45 248839_at AT5G46690 bHLH071, beta HLH protein 71 -0.362 -0.034
46 251013_at AT5G02540 [NAD(P)-binding Rossmann-fold superfamily protein] -0.360 0.510
47 257670_at AT3G20340 unknown -0.333 -0.153
48 248015_at AT5G56370 [F-box/RNI-like/FBD-like domains-containing protein] -0.325 0.319
49 246687_at AT5G33370 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.295 -0.045
50 248888_at AT5G46240 AtKAT1, KAT1, potassium channel in Arabidopsis thaliana 1 -0.260 -0.036
51 259235_at AT3G11600 unknown -0.255 -0.062
52 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 -0.249 0.040
53 261109_at AT1G75450 ATCKX5, ARABIDOPSIS THALIANA CYTOKININ OXIDASE 5, ATCKX6, CYTOKININ OXIDASE 6, CKX5, cytokinin oxidase 5 -0.248 -0.019
54 258177_at AT3G21660 [UBX domain-containing protein] -0.246 -0.254
55 258836_at AT3G07210 unknown -0.239 -0.132
56 255732_at AT1G25450 CER60, ECERIFERUM 60, KCS5, 3-ketoacyl-CoA synthase 5 -0.219 0.136
57 260041_at AT1G68780 [RNI-like superfamily protein] -0.214 -0.208
58 249895_at AT5G22500 FAR1, fatty acid reductase 1 -0.212 0.238
59 255878_at AT2G40620 [Basic-leucine zipper (bZIP) transcription factor family protein] -0.209 0.131
60 266836_at AT2G26000 BRIZ2, BRAP2 RING ZnF UBP domain-containing protein 2 -0.208 -0.144
61 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 -0.206 -0.078
62 247866_at AT5G57550 XTH25, xyloglucan endotransglucosylase/hydrolase 25, XTR3, xyloglucan endotransglycosylase 3 -0.204 0.084
63 264007_at AT2G21140 ATPRP2, proline-rich protein 2, PRP2, proline-rich protein 2 -0.201 0.035
64 247457_at AT5G62170 TRM25, TON1 Recruiting Motif 25 -0.198 0.118
65 260297_at AT1G80280 [alpha/beta-Hydrolases superfamily protein] -0.196 0.237
66 267555_at AT2G32765 ATSUMO5, SUM5, SUMO 5, SUMO5, small ubiquitinrelated modifier 5 -0.195 -0.084
67 246395_at AT1G58170 [Disease resistance-responsive (dirigent-like protein) family protein] -0.191 -0.058
68 249290_at AT5G41060 [DHHC-type zinc finger family protein] -0.190 0.012
69 259801_at AT1G72230 [Cupredoxin superfamily protein] -0.190 0.015
70 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 -0.187 0.178
71 245011_at ATCG00430 PSBG, photosystem II reaction center protein G -0.181 0.094
72 254544_at AT4G19820 [Glycosyl hydrolase family protein with chitinase insertion domain] -0.181 -0.225
73 261012_at AT1G26600 CLE9, CLAVATA3/ESR-RELATED 9 -0.181 -0.008
74 259377_at AT3G16380 PAB6, poly(A) binding protein 6 -0.180 -0.037
75 249813_at AT5G23940 DCR, DEFECTIVE IN CUTICULAR RIDGES, EMB3009, EMBRYO DEFECTIVE 3009, PEL3, PERMEABLE LEAVES3 -0.180 0.045
76 252950_at AT4G38690 [PLC-like phosphodiesterases superfamily protein] -0.176 0.157
77 247048_at AT5G66560 [Phototropic-responsive NPH3 family protein] -0.176 -0.064
78 247069_at AT5G66920 sks17, SKU5 similar 17 -0.173 0.048
79 256671_at AT3G52290 IQD3, IQ-domain 3 -0.172 0.050