4.0:Information of module
6xX2x interploidy cross
In comparison with chalazal endosperm heart stage help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019252 starch biosynthetic process BP 1.866e-03
GO:1901657 glycosyl compound metabolic process BP 2.189e-03
GO:0016144 S-glycoside biosynthetic process BP 2.309e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0043414 macromolecule methylation BP 5.095e-12
GO:0032259 methylation BP 7.247e-12
GO:0001510 RNA methylation BP 3.357e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
6xX2x interploidy cross		 Log2 signal ratio
chalazal endosperm heart stage
1 257944_at AT3G21850 ASK9, SKP1-like 9, SK9, SKP1-like 9 1.740 -0.047
2 256497_at AT1G31580 CXC750, ECS1 1.370 0.269
3 261684_at AT1G47400 unknown 1.289 -0.573
4 262206_at AT2G01090 [Ubiquinol-cytochrome C reductase hinge protein] 1.223 1.104
5 261848_at AT1G11590 [Plant invertase/pectin methylesterase inhibitor superfamily] 1.134 -0.069
6 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 0.927 -0.512
7 257945_at AT3G21860 ASK10, SKP1-like 10, SK10, SKP1-like 10 0.911 0.813
8 258252_at AT3G15720 [Pectin lyase-like superfamily protein] 0.882 0.064
9 266989_at AT2G39330 JAL23, jacalin-related lectin 23 0.867 -0.205
10 254234_at AT4G23680 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.849 -0.399
11 245341_at AT4G16447 unknown 0.799 -0.081
12 256011_at AT1G19230 [Riboflavin synthase-like superfamily protein] 0.773 -0.657
13 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.724 0.001
14 253152_at AT4G35690 unknown 0.719 -0.762
15 246260_at AT1G31820 PUT1, POLYAMINE UPTAKE TRANSPORTER 1 0.713 -0.698
16 259574_at AT1G35310 MLP168, MLP-like protein 168 0.699 -0.336
17 261826_at AT1G11580 ATPMEPCRA, PMEPCRA, methylesterase PCR A 0.688 0.237
18 254585_at AT4G19500 [nucleoside-triphosphatases] 0.673 -0.555
19 259606_at AT1G27920 MAP65-8, microtubule-associated protein 65-8 0.669 -0.747
20 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 0.664 -0.315
21 252692_at AT3G43960 [Cysteine proteinases superfamily protein] 0.659 0.375
22 261212_at AT1G12880 atnudt12, nudix hydrolase homolog 12, NUDT12, nudix hydrolase homolog 12 0.623 -0.301
23 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 0.621 0.654
24 250828_at AT5G05250 unknown 0.604 0.385
25 252648_at AT3G44630 [Disease resistance protein (TIR-NBS-LRR class) family] 0.589 0.018
26 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 0.588 0.278
27 245555_at AT4G15390 [HXXXD-type acyl-transferase family protein] 0.586 0.634
28 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.577 -0.719
29 247742_at AT5G58980 [Neutral/alkaline non-lysosomal ceramidase] 0.569 -0.739
30 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 0.564 0.426
31 255484_at AT4G02540 [Cysteine/Histidine-rich C1 domain family protein] 0.555 0.860
32 258434_at AT3G16770 ATEBP, ethylene-responsive element binding protein, EBP, ethylene-responsive element binding protein, ERF72, ETHYLENE RESPONSE FACTOR 72, RAP2.3, RELATED TO AP2 3 0.550 0.198
33 252462_at AT3G47250 unknown 0.547 -0.313
34 245317_at AT4G15610 [Uncharacterised protein family (UPF0497)] 0.496 -0.990
35 263574_at AT2G16990 [Major facilitator superfamily protein] 0.472 -0.563
36 264958_at AT1G76960 unknown 0.458 -0.485
37 259045_at AT3G03410 [EF hand calcium-binding protein family] -1.178 1.214
38 260655_at AT1G19320 [Pathogenesis-related thaumatin superfamily protein] -1.090 0.472
39 267395_at AT2G44250 unknown -1.048 0.990
40 257681_at AT3G13370 unknown -1.003 0.550
41 250804_at AT5G05030 unknown -0.984 1.624
42 266386_at AT2G32370 HDG3, homeodomain GLABROUS 3 -0.974 0.632
43 265590_at AT2G20160 ASK17, ARABIDOPSIS SKP1-LIKE 17, MEO, MEIDOS -0.947 1.261
44 257123_at AT3G20030 [F-box and associated interaction domains-containing protein] -0.931 0.227
45 245305_at AT4G17215 [Pollen Ole e 1 allergen and extensin family protein] -0.918 0.379
46 250416_at AT5G11220 unknown -0.914 0.457
47 255608_at AT4G01140 unknown -0.905 0.255
48 246859_at AT5G25950 unknown -0.904 0.391
49 249479_at AT5G38960 [RmlC-like cupins superfamily protein] -0.892 0.829
50 254310_at AT4G22430 [F-box family protein] -0.876 1.362
51 254450_at AT4G21080 AtDOF4.5, DOF4.5, DNA-binding with One Finger 4.5 -0.825 1.495
52 261271_at AT1G26795 [Plant self-incompatibility protein S1 family] -0.781 1.616
53 250473_at AT5G10220 ANN6, annexin 6, ANNAT6, ANNEXIN ARABIDOPSIS THALIANA 6 -0.758 0.621
54 253217_at AT4G34970 ADF9, actin depolymerizing factor 9 -0.736 0.310
55 252767_at AT3G42830 [RING/U-box superfamily protein] -0.727 1.207
56 262327_at AT1G64130 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.721 -0.857
57 258781_at AT3G11740 unknown -0.700 0.274
58 253839_at AT4G27890 [HSP20-like chaperones superfamily protein] -0.689 1.276
59 267345_at AT2G44240 unknown -0.658 0.281
60 249856_at AT5G22980 scpl47, serine carboxypeptidase-like 47 -0.651 1.431
61 267408_at AT2G34890 [CTP synthase family protein] -0.643 0.678
62 260437_at AT1G68380 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] -0.625 -0.995
63 253963_at AT4G26470 [Calcium-binding EF-hand family protein] -0.587 0.874
64 258707_at AT3G09480 [Histone superfamily protein] -0.582 -0.162
65 249450_at AT5G39440 SnRK1.3, SNF1-related protein kinase 1.3 -0.570 0.156
66 260471_at AT1G11070 unknown -0.558 0.570
67 261466_at AT1G07690 unknown -0.546 1.221
68 245511_at AT4G15755 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.546 0.298
69 250241_at AT5G13600 [Phototropic-responsive NPH3 family protein] -0.542 0.291
70 267585_s_at AT2G42090 ACT9, actin 9 -0.525 0.356
71 261942_at AT1G22590 AGL87, AGAMOUS-like 87 -0.517 0.376