4.0:Information of module
6xX2x interploidy cross
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019252 starch biosynthetic process BP 1.866e-03
GO:1901657 glycosyl compound metabolic process BP 2.189e-03
GO:0016144 S-glycoside biosynthetic process BP 2.309e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0043414 macromolecule methylation BP 5.095e-12
GO:0032259 methylation BP 7.247e-12
GO:0001510 RNA methylation BP 3.357e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
6xX2x interploidy cross		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 257944_at AT3G21850 ASK9, SKP1-like 9, SK9, SKP1-like 9 1.740 -0.078
2 256497_at AT1G31580 CXC750, ECS1 1.370 -0.047
3 261684_at AT1G47400 unknown 1.289 -0.201
4 262206_at AT2G01090 [Ubiquinol-cytochrome C reductase hinge protein] 1.223 0.162
5 261848_at AT1G11590 [Plant invertase/pectin methylesterase inhibitor superfamily] 1.134 0.051
6 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 0.927 -0.104
7 257945_at AT3G21860 ASK10, SKP1-like 10, SK10, SKP1-like 10 0.911 0.067
8 258252_at AT3G15720 [Pectin lyase-like superfamily protein] 0.882 0.066
9 266989_at AT2G39330 JAL23, jacalin-related lectin 23 0.867 -0.015
10 254234_at AT4G23680 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.849 -0.237
11 245341_at AT4G16447 unknown 0.799 0.171
12 256011_at AT1G19230 [Riboflavin synthase-like superfamily protein] 0.773 0.133
13 263161_at AT1G54020 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.724 0.439
14 253152_at AT4G35690 unknown 0.719 0.064
15 246260_at AT1G31820 PUT1, POLYAMINE UPTAKE TRANSPORTER 1 0.713 0.022
16 259574_at AT1G35310 MLP168, MLP-like protein 168 0.699 -0.011
17 261826_at AT1G11580 ATPMEPCRA, PMEPCRA, methylesterase PCR A 0.688 -0.237
18 254585_at AT4G19500 [nucleoside-triphosphatases] 0.673 0.004
19 259606_at AT1G27920 MAP65-8, microtubule-associated protein 65-8 0.669 -0.095
20 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 0.664 0.069
21 252692_at AT3G43960 [Cysteine proteinases superfamily protein] 0.659 -0.192
22 261212_at AT1G12880 atnudt12, nudix hydrolase homolog 12, NUDT12, nudix hydrolase homolog 12 0.623 -0.039
23 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 0.621 0.037
24 250828_at AT5G05250 unknown 0.604 -0.076
25 252648_at AT3G44630 [Disease resistance protein (TIR-NBS-LRR class) family] 0.589 -0.091
26 257506_at AT1G29440 SAUR63, SMALL AUXIN UP RNA 63 0.588 0.051
27 245555_at AT4G15390 [HXXXD-type acyl-transferase family protein] 0.586 0.014
28 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.577 -0.103
29 247742_at AT5G58980 [Neutral/alkaline non-lysosomal ceramidase] 0.569 -0.028
30 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 0.564 0.040
31 255484_at AT4G02540 [Cysteine/Histidine-rich C1 domain family protein] 0.555 -0.132
32 258434_at AT3G16770 ATEBP, ethylene-responsive element binding protein, EBP, ethylene-responsive element binding protein, ERF72, ETHYLENE RESPONSE FACTOR 72, RAP2.3, RELATED TO AP2 3 0.550 -0.411
33 252462_at AT3G47250 unknown 0.547 0.513
34 245317_at AT4G15610 [Uncharacterised protein family (UPF0497)] 0.496 0.016
35 263574_at AT2G16990 [Major facilitator superfamily protein] 0.472 0.168
36 264958_at AT1G76960 unknown 0.458 -0.172
37 259045_at AT3G03410 [EF hand calcium-binding protein family] -1.178 -0.091
38 260655_at AT1G19320 [Pathogenesis-related thaumatin superfamily protein] -1.090 -0.125
39 267395_at AT2G44250 unknown -1.048 0.024
40 257681_at AT3G13370 unknown -1.003 0.055
41 250804_at AT5G05030 unknown -0.984 0.023
42 266386_at AT2G32370 HDG3, homeodomain GLABROUS 3 -0.974 -0.158
43 265590_at AT2G20160 ASK17, ARABIDOPSIS SKP1-LIKE 17, MEO, MEIDOS -0.947 -0.053
44 257123_at AT3G20030 [F-box and associated interaction domains-containing protein] -0.931 -0.021
45 245305_at AT4G17215 [Pollen Ole e 1 allergen and extensin family protein] -0.918 -0.034
46 250416_at AT5G11220 unknown -0.914 0.051
47 255608_at AT4G01140 unknown -0.905 -0.135
48 246859_at AT5G25950 unknown -0.904 0.058
49 249479_at AT5G38960 [RmlC-like cupins superfamily protein] -0.892 0.005
50 254310_at AT4G22430 [F-box family protein] -0.876 -0.003
51 254450_at AT4G21080 AtDOF4.5, DOF4.5, DNA-binding with One Finger 4.5 -0.825 0.066
52 261271_at AT1G26795 [Plant self-incompatibility protein S1 family] -0.781 -0.076
53 250473_at AT5G10220 ANN6, annexin 6, ANNAT6, ANNEXIN ARABIDOPSIS THALIANA 6 -0.758 -0.004
54 253217_at AT4G34970 ADF9, actin depolymerizing factor 9 -0.736 0.098
55 252767_at AT3G42830 [RING/U-box superfamily protein] -0.727 -0.210
56 262327_at AT1G64130 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.721 0.115
57 258781_at AT3G11740 unknown -0.700 0.043
58 253839_at AT4G27890 [HSP20-like chaperones superfamily protein] -0.689 0.056
59 267345_at AT2G44240 unknown -0.658 0.073
60 249856_at AT5G22980 scpl47, serine carboxypeptidase-like 47 -0.651 -0.347
61 267408_at AT2G34890 [CTP synthase family protein] -0.643 0.079
62 260437_at AT1G68380 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] -0.625 -0.065
63 253963_at AT4G26470 [Calcium-binding EF-hand family protein] -0.587 -0.261
64 258707_at AT3G09480 [Histone superfamily protein] -0.582 -0.142
65 249450_at AT5G39440 SnRK1.3, SNF1-related protein kinase 1.3 -0.570 0.048
66 260471_at AT1G11070 unknown -0.558 -0.042
67 261466_at AT1G07690 unknown -0.546 0.012
68 245511_at AT4G15755 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.546 0.176
69 250241_at AT5G13600 [Phototropic-responsive NPH3 family protein] -0.542 0.406
70 267585_s_at AT2G42090 ACT9, actin 9 -0.525 0.022
71 261942_at AT1G22590 AGL87, AGAMOUS-like 87 -0.517 0.537