4.0:Information of module
cngc1-3
In comparison with Cells whole embryo help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010224 response to UV-B BP 4.800e-10
GO:0009411 response to UV BP 3.221e-06
GO:0001666 response to hypoxia BP 5.839e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006355 regulation of transcription, DNA-templat... BP 1.020e-03
GO:1903506 regulation of nucleic acid-templated tra... BP 1.020e-03
GO:2001141 regulation of RNA biosynthetic process BP 1.020e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
cngc1-3		 Log2 signal ratio
Cells whole embryo
1 254805_at AT4G12480 EARLI1, EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 1.245 -0.514
2 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 1.174 -0.913
3 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 1.047 0.261
4 250474_at AT5G10230 ANN7, ANNEXIN 7, ANNAT7, annexin 7 0.995 -0.106
5 253298_at AT4G33560 [Wound-responsive family protein] 0.978 -0.535
6 257481_at AT1G08430 ALMT1, aluminum-activated malate transporter 1, ATALMT1, ARABIDOPSIS THALIANA ALUMINUM-ACTIVATED MALATE TRANSPORTER 1 0.960 1.240
7 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.945 -0.217
8 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] 0.938 0.633
9 254240_at AT4G23496 SP1L5, SPIRAL1-like5 0.931 -0.363
10 246375_at AT1G51830 [Leucine-rich repeat protein kinase family protein] 0.925 0.045
11 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 0.918 0.519
12 248729_at AT5G48010 AtTHAS1, Arabidopsis thaliana thalianol synthase 1, THAS, THALIANOL SYNTHASE, THAS1, thalianol synthase 1 0.894 -0.556
13 252123_at AT3G51240 F3'H, F3H, flavanone 3-hydroxylase, TT6, TRANSPARENT TESTA 6 0.828 0.684
14 258209_at AT3G14060 unknown 0.824 -0.764
15 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.823 -0.873
16 258349_at AT3G17609 HYH, HY5-homolog 0.778 -1.065
17 264042_at AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 0.763 -0.418
18 264846_at AT2G17850 [Rhodanese/Cell cycle control phosphatase superfamily protein] 0.756 -0.223
19 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 0.745 -0.475
20 260522_x_at AT2G41730 unknown 0.738 -0.777
21 250794_at AT5G05270 AtCHIL, CHIL, chalcone isomerase like 0.733 0.273
22 252010_at AT3G52740 unknown 0.732 -0.028
23 250670_at AT5G06860 ATPGIP1, POLYGALACTURONASE INHIBITING PROTEIN 1, PGIP1, polygalacturonase inhibiting protein 1 0.721 -0.408
24 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 0.719 -0.756
25 250464_at AT5G10040 unknown 0.714 -1.089
26 266712_at AT2G46750 AtGulLO2, GulLO2, L -gulono-1,4-lactone ( L -GulL) oxidase 2 0.682 -0.713
27 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.677 0.015
28 252340_at AT3G48920 AtMYB45, myb domain protein 45, MYB45, myb domain protein 45 0.668 -0.418
29 248686_at AT5G48540 [receptor-like protein kinase-related family protein] 0.666 0.267
30 264415_at AT1G43160 RAP2.6, related to AP2 6 0.662 -1.043
31 248434_at AT5G51440 [HSP20-like chaperones superfamily protein] 0.652 -0.627
32 254543_at AT4G19810 ChiC, class V chitinase 0.641 -0.241
33 255138_at AT4G08380 [Proline-rich extensin-like family protein] -0.768 -1.446
34 256266_at AT3G12320 LNK3, night light-inducible and clock-regulated 3 -0.698 0.712
35 251869_at AT3G54500 LNK2, night light-inducible and clock-regulated 2 -0.638 1.053
36 252569_at AT3G45420 LecRK-I.4, L-type lectin receptor kinase I.4 -0.534 -0.035
37 247452_at AT5G62430 CDF1, cycling DOF factor 1 -0.523 0.026
38 261432_at AT1G07680 unknown -0.516 -1.021
39 260298_at AT1G80320 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.510 -0.425
40 247323_at AT5G64170 LNK1, night light-inducible and clock-regulated 1 -0.486 0.315
41 252429_at AT3G47500 CDF3, cycling DOF factor 3 -0.465 0.639
42 257485_at AT1G63580 [Receptor-like protein kinase-related family protein] -0.441 0.695
43 247682_at AT5G59650 [Leucine-rich repeat protein kinase family protein] -0.441 -0.686
44 253408_at AT4G32950 [Protein phosphatase 2C family protein] -0.414 -0.745
45 250803_at AT5G04980 [DNAse I-like superfamily protein] -0.413 -0.345
46 262898_at AT1G59850 [ARM repeat superfamily protein] -0.401 0.095
47 265713_at AT2G03530 ATUPS2, ARABIDOPSIS THALIANA UREIDE PERMEASE 2, UPS2, ureide permease 2 -0.400 0.713
48 261569_at AT1G01060 LHY, LATE ELONGATED HYPOCOTYL, LHY1, LATE ELONGATED HYPOCOTYL 1 -0.377 -0.359
49 261957_at AT1G64660 ATMGL, methionine gamma-lyase, MGL, methionine gamma-lyase -0.372 0.283
50 252858_at AT4G39770 TPPH, trehalose-6-phosphate phosphatase H -0.370 0.848
51 252604_at AT3G45060 ATNRT2.6, ARABIDOPSIS THALIANA HIGH AFFINITY NITRATE TRANSPORTER 2.6, NRT2.6, high affinity nitrate transporter 2.6 -0.370 1.037
52 259455_x_at AT1G44030 [Cysteine/Histidine-rich C1 domain family protein] -0.365 -1.366
53 261275_at AT1G26700 ATMLO14, MILDEW RESISTANCE LOCUS O 14, MLO14, MILDEW RESISTANCE LOCUS O 14 -0.362 -0.176
54 264489_at AT1G27370 SPL10, squamosa promoter binding protein-like 10 -0.347 0.013
55 260907_at AT1G02575 unknown -0.346 0.173
56 251069_at AT5G01930 AtMAN6, MAN6, endo-beta-mannase 6 -0.343 -0.551
57 261491_at AT1G14350 AtMYB124, myb domain protein 124, FLP, FOUR LIPS, MYB124 -0.332 -0.544
58 267438_at AT2G19050 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.328 -0.608
59 257245_at AT3G24110 [Calcium-binding EF-hand family protein] -0.318 0.010
60 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 -0.308 -0.121
61 261185_at AT1G34540 CYP94D1, cytochrome P450, family 94, subfamily D, polypeptide 1 -0.307 -0.938
62 255665_at AT4G00450 CCT, CENTER CITY, CRP, CRYPTIC PRECOCIOUS, MED12, mediator 12 -0.298 0.928
63 256763_at AT3G16860 COBL8, COBRA-like protein 8 precursor -0.293 0.603