4.0:Information of module
GA 120min
In comparison with root epidermis and lateral root cap 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0018871 1-aminocyclopropane-1-carboxylate metabo... BP 9.902e-03
GO:0042218 1-aminocyclopropane-1-carboxylate biosyn... BP 9.902e-03
GO:0006869 lipid transport BP 1.528e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009887 organ morphogenesis BP 1.420e-04
GO:0018208 peptidyl-proline modification BP 1.099e-03
GO:0006644 phospholipid metabolic process BP 2.317e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
GA 120min		 Log2 signal ratio
root epidermis and lateral root cap 40 mM NaCl
1 255844_at AT2G33580 LYK5, LysM-containing receptor-like kinase 5 0.225 0.422
2 246637_at AT5G34870 [zinc knuckle (CCHC-type) family protein] 0.205 0.032
3 264370_at AT1G12100 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.199 0.031
4 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.195 0.008
5 251202_at AT3G63040 unknown 0.192 0.018
6 249001_at AT5G44990 [Glutathione S-transferase family protein] 0.190 0.018
7 256884_at AT3G15200 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.186 -0.016
8 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE 0.183 0.053
9 245643_at AT1G25340 AtMYB116, myb domain protein 116, MYB116, myb domain protein 116 0.182 -0.021
10 258618_at AT3G02885 GASA5, GAST1 protein homolog 5 0.182 0.097
11 266408_at AT2G38520 [copia-like retrotransposon family, has a 8.4e-60 P-value blast match to dbj|BAA78427.1| polyprotein (AtRE2-2) (Arabidopsis thaliana) (Ty1_Copia-element)] 0.181 -0.105
12 254135_at AT4G24860 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.181 0.002
13 261670_at AT1G18520 TET11, tetraspanin11 0.176 0.040
14 245607_at AT4G14330 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.256 -0.163
15 263238_at AT2G16580 SAUR8, SMALL AUXIN UPREGULATED RNA 8 -0.217 -0.158
16 253975_at AT4G26600 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.170 -0.371
17 260722_at AT1G48040 [Protein phosphatase 2C family protein] -0.170 -0.199
18 264134_at AT1G79070 [SNARE-associated protein-related] -0.156 -0.605
19 263565_at AT2G15390 atfut4, FUT4, fucosyltransferase 4 -0.155 -0.546
20 249513_at AT5G38460 [ALG6, ALG8 glycosyltransferase family] -0.150 -0.246
21 267021_at AT2G39300 unknown -0.147 -0.040
22 260732_at AT1G17520 [Homeodomain-like/winged-helix DNA-binding family protein] -0.136 -0.060
23 251753_at AT3G55760 unknown -0.130 0.335
24 246769_at AT5G27440 unknown -0.126 -0.206
25 245789_at AT1G32090 [early-responsive to dehydration stress protein (ERD4)] -0.119 0.068
26 257432_at AT2G21850 [Cysteine/Histidine-rich C1 domain family protein] -0.113 0.017