4.0:Information of module
IPT8 mutant tZ 24h
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044550 secondary metabolite biosynthetic proces... BP 7.224e-09
GO:0050896 response to stimulus BP 2.266e-08
GO:0009735 response to cytokinin BP 2.409e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006399 tRNA metabolic process BP 2.157e-04
GO:0044711 single-organism biosynthetic process BP 3.638e-04
GO:0000038 very long-chain fatty acid metabolic pro... BP 3.860e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
IPT8 mutant tZ 24h		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 256631_at AT3G28320 unknown 1.283 -0.671
2 259388_at AT1G13420 ATST4B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 4B, ST4B, sulfotransferase 4B 1.173 -0.610
3 246825_at AT5G26260 [TRAF-like family protein] 1.125 0.418
4 248729_at AT5G48010 AtTHAS1, Arabidopsis thaliana thalianol synthase 1, THAS, THALIANOL SYNTHASE, THAS1, thalianol synthase 1 1.029 -0.725
5 253164_at AT4G35725 unknown 1.000 -1.191
6 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 0.995 0.405
7 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] 0.929 -0.792
8 249599_at AT5G37990 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.904 -0.370
9 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 0.886 0.282
10 247956_at AT5G56970 ATCKX3, CKX3, cytokinin oxidase 3 0.881 -0.445
11 264404_at AT2G25160 CYP82F1, cytochrome P450, family 82, subfamily F, polypeptide 1 0.849 -0.958
12 262608_at AT1G14120 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.832 -0.268
13 266419_at AT2G38760 ANN3, ANNEXIN 3, ANNAT3, annexin 3, AtANN3 0.796 -1.044
14 256602_at AT3G28310 unknown 0.777 0.023
15 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 0.734 0.919
16 264470_at AT1G67110 CYP735A2, cytochrome P450, family 735, subfamily A, polypeptide 2 0.709 0.345
17 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] 0.707 -1.086
18 252537_at AT3G45710 [Major facilitator superfamily protein] 0.701 -0.486
19 253815_at AT4G28250 ATEXPB3, expansin B3, ATHEXP BETA 1.6, EXPB3, expansin B3 0.688 -0.294
20 262915_at AT1G59940 ARR3, response regulator 3 0.678 -0.152
21 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] 0.658 -0.906
22 254632_at AT4G18630 unknown 0.650 -1.353
23 259846_at AT1G72140 [Major facilitator superfamily protein] 0.645 -0.192
24 248432_at AT5G51390 unknown 0.629 -0.958
25 267012_at AT2G39220 PLA IIB, PLP6, PATATIN-like protein 6 0.628 -0.659
26 257467_at AT1G31320 LBD4, LOB domain-containing protein 4 0.625 -0.718
27 246251_at AT4G37220 [Cold acclimation protein WCOR413 family] 0.619 -0.828
28 255385_at AT4G03610 [Metallo-hydrolase/oxidoreductase superfamily protein] 0.616 -0.083
29 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 0.612 -0.372
30 252639_at AT3G44550 FAR5, fatty acid reductase 5 0.611 -0.683
31 259466_at AT1G19050 ARR7, response regulator 7 0.594 0.020
32 247754_at AT5G59080 unknown 0.592 -0.198
33 251992_at AT3G53350 MIDD1, Microtubule Depletion Domain 1, RIP3, ROP interactive partner 3, RIP4, ROP interactive partner 4 0.588 0.000
34 265083_at AT1G03820 unknown 0.580 -0.379
35 264790_at AT2G17820 AHK1, ATHK1, histidine kinase 1, HK1, histidine kinase 1 0.571 -0.136
36 248723_at AT5G47950 [HXXXD-type acyl-transferase family protein] 0.561 -0.148
37 247097_at AT5G66460 AtMAN7, MAN7, endo-beta-mannase 7 0.551 0.837
38 249567_at AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.544 0.038
39 253774_at AT4G28530 anac074, NAC domain containing protein 74, NAC074, NAC domain containing protein 74 0.536 -0.359
40 252202_at AT3G50300 [HXXXD-type acyl-transferase family protein] 0.514 -0.367
41 254064_at AT4G25410 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.513 -0.098
42 263737_at AT1G60010 unknown 0.511 -0.108
43 264138_at AT1G78950 AtBAS, AtLUP4, BAS, beta-amyrin synthase 0.500 -0.761
44 250327_at AT5G12050 unknown 0.498 -1.241
45 248732_at AT5G48070 ATXTH20, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20, XTH20, xyloglucan endotransglucosylase/hydrolase 20 0.495 -0.036
46 259653_at AT1G55240 unknown 0.495 -1.144
47 253627_at AT4G30650 [Low temperature and salt responsive protein family] 0.492 0.150
48 252433_at AT3G47560 [alpha/beta-Hydrolases superfamily protein] 0.492 -0.080
49 258938_at AT3G10080 [RmlC-like cupins superfamily protein] 0.489 0.511
50 260053_at AT1G78120 TPR12, tetratricopeptide repeat 12 0.489 -0.791
51 252536_at AT3G45700 [Major facilitator superfamily protein] 0.482 -0.021
52 262801_at AT1G21010 unknown 0.472 0.154
53 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 0.464 0.207
54 266372_at AT2G41310 ARR8, RESPONSE REGULATOR 8, ATRR3, response regulator 3, RR3, response regulator 3 0.463 0.509
55 262704_at AT1G16530 ASL9, ASYMMETRIC LEAVES 2-like 9, LBD3, LOB DOMAIN-CONTAINING PROTEIN 3 0.454 0.571
56 266418_at AT2G38750 ANNAT4, annexin 4, AtANN4 0.452 0.744
57 248423_at AT5G51670 unknown 0.451 0.794
58 260034_at AT1G68810 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.448 -0.106
59 263380_at AT2G40200 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.446 -0.136
60 256447_at AT1G33440 AtNPF4.4, NPF4.4, NRT1/ PTR family 4.4 0.443 -1.000
61 264071_at AT2G27920 SCPL51, serine carboxypeptidase-like 51 0.441 0.510
62 250860_at AT5G04770 ATCAT6, ARABIDOPSIS THALIANA CATIONIC AMINO ACID TRANSPORTER 6, CAT6, cationic amino acid transporter 6 0.434 -0.109
63 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.430 -0.305
64 253042_at AT4G37550 [Acetamidase/Formamidase family protein] 0.430 0.469
65 250200_at AT5G14130 [Peroxidase superfamily protein] 0.428 -0.069
66 247228_at AT5G65140 TPPJ, trehalose-6-phosphate phosphatase J 0.417 -0.094
67 247360_at AT5G63450 CYP94B1, cytochrome P450, family 94, subfamily B, polypeptide 1 0.416 -0.607
68 247406_at AT5G62920 ARR6, response regulator 6 0.412 -0.966
69 252296_at AT3G48970 [Heavy metal transport/detoxification superfamily protein ] 0.408 -1.010
70 261934_at AT1G22400 ATUGT85A1, ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UGT85A1 0.389 0.205
71 260438_at AT1G68290 ENDO2, endonuclease 2 0.387 -0.333
72 261109_at AT1G75450 ATCKX5, ARABIDOPSIS THALIANA CYTOKININ OXIDASE 5, ATCKX6, CYTOKININ OXIDASE 6, CKX5, cytokinin oxidase 5 0.387 -0.212
73 251668_at AT3G57010 [Calcium-dependent phosphotriesterase superfamily protein] 0.386 0.281
74 250661_at AT5G07030 [Eukaryotic aspartyl protease family protein] 0.384 -0.371
75 262940_at AT1G79520 [Cation efflux family protein] 0.382 -0.145
76 258342_at AT3G22800 [Leucine-rich repeat (LRR) family protein] 0.373 -1.007
77 245439_at AT4G16670 unknown 0.368 -0.338
78 267637_at AT2G42190 unknown 0.366 0.176
79 247005_at AT5G67520 adenosine-5'-phosphosulfate (APS) kinase 4 0.365 -0.554
80 247600_at AT5G60890 ATMYB34, ATR1, ALTERED TRYPTOPHAN REGULATION 1, MYB34, myb domain protein 34 0.359 0.247
81 267590_at AT2G39700 ATEXP4, ATEXPA4, expansin A4, ATHEXP ALPHA 1.6, EXPA4, expansin A4 0.352 0.335
82 267337_at AT2G39980 [HXXXD-type acyl-transferase family protein] 0.351 1.129
83 256713_at AT2G34060 [Peroxidase superfamily protein] 0.349 -0.552
84 262785_at AT1G10750 unknown 0.348 -0.364
85 251665_at AT3G57040 ARR9, response regulator 9, ATRR4, RESPONSE REGULATOR 4 0.347 0.082
86 251886_at AT3G54260 TBL36, TRICHOME BIREFRINGENCE-LIKE 36 0.345 -0.568
87 248674_at AT5G48800 [Phototropic-responsive NPH3 family protein] 0.338 -1.057
88 247905_at AT5G57400 unknown 0.337 -1.546
89 257798_at AT3G15950 NAI2 0.337 1.174
90 263236_at AT1G10470 ARR4, response regulator 4, ATRR1, RESPONCE REGULATOR 1, IBC7, INDUCED BY CYTOKININ 7, MEE7, maternal effect embryo arrest 7 0.336 0.760
91 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.334 -0.707
92 263664_at AT1G04250 AXR3, AUXIN RESISTANT 3, IAA17, indole-3-acetic acid inducible 17 0.331 0.257
93 255818_at AT2G33570 GALS1, galactan synthase 1 0.325 0.235
94 266209_at AT2G27550 ATC, centroradialis -0.905 -0.445
95 256349_at AT1G54890 [Late embryogenesis abundant (LEA) protein-related] -0.775 0.248
96 265769_at AT2G48090 unknown -0.667 -0.837
97 247634_at AT5G60520 [Late embryogenesis abundant (LEA) protein-related] -0.651 0.479
98 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 -0.631 -0.969
99 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.602 0.128
100 245385_at AT4G14020 [Rapid alkalinization factor (RALF) family protein] -0.589 -0.266
101 250469_at AT5G10130 [Pollen Ole e 1 allergen and extensin family protein] -0.542 -0.349
102 247922_at AT5G57500 [Galactosyltransferase family protein] -0.531 0.220
103 251298_at AT3G62040 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.531 -0.547
104 249894_at AT5G22580 [Stress responsive A/B Barrel Domain] -0.529 -0.298
105 263481_at AT2G04025 GLV7, GOLVEN 7, RGF3, root meristem growth factor 3 -0.519 0.105
106 251524_at AT3G58990 IPMI1, isopropylmalate isomerase 1 -0.510 -0.270
107 257375_at AT2G38640 unknown -0.504 -0.920
108 267457_at AT2G33790 AGP30, arabinogalactan protein 30, ATAGP30 -0.499 -0.752
109 253483_at AT4G31910 BAT1, BR-related AcylTransferase1, PIZ, PIZZA -0.487 -0.819
110 262728_at AT1G75820 ATCLV1, CLV1, CLAVATA 1, FAS3, FASCIATA 3, FLO5, FLOWER DEVELOPMENT 5 -0.484 -0.145
111 258362_at AT3G14280 unknown -0.469 -0.760
112 246125_at AT5G19875 unknown -0.454 -0.673
113 259275_at AT3G01060 unknown -0.454 -0.760
114 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 -0.429 0.058
115 258293_at AT3G23430 ATPHO1, ARABIDOPSIS PHOSPHATE 1, PHO1, phosphate 1 -0.427 -0.052
116 245891_at AT5G09220 AAP2, amino acid permease 2 -0.409 -0.611
117 250002_at AT5G18690 AGP25, arabinogalactan protein 25, ATAGP25, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEINS 25 -0.396 -0.016
118 262154_at AT1G52700 [alpha/beta-Hydrolases superfamily protein] -0.390 -0.689
119 249126_at AT5G43380 TOPP6, type one serine/threonine protein phosphatase 6 -0.390 0.286
120 250438_at AT5G10580 unknown -0.385 0.014
121 249440_at AT5G40030 [Protein kinase superfamily protein] -0.385 -0.297
122 260077_at AT1G73620 [Pathogenesis-related thaumatin superfamily protein] -0.383 0.232
123 253629_at AT4G30450 [glycine-rich protein] -0.381 0.044
124 245488_at AT4G16270 [Peroxidase superfamily protein] -0.380 0.298
125 264323_at AT1G04180 YUC9, YUCCA 9 -0.365 0.055
126 261327_at AT1G44830 [Integrase-type DNA-binding superfamily protein] -0.364 -0.167
127 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] -0.362 -0.332
128 250231_at AT5G13910 LEP, LEAFY PETIOLE -0.359 0.419
129 260076_at AT1G73630 [EF hand calcium-binding protein family] -0.355 -0.715
130 263482_at AT2G03980 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.353 -0.217
131 247717_at AT5G59320 LTP3, lipid transfer protein 3 -0.352 0.012
132 255110_at AT4G08770 Prx37, peroxidase 37 -0.345 0.290
133 252988_at AT4G38410 [Dehydrin family protein] -0.342 0.724
134 263465_at AT2G31940 unknown -0.341 -0.484
135 264889_at AT1G23050 hydroxyproline-rich glycoprotein family protein -0.335 -0.825
136 246390_at AT1G77330 ACO5, ACC oxidase 5 -0.332 0.690
137 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 -0.332 0.468
138 266301_at AT2G26960 AtMYB81, myb domain protein 81, MYB81, myb domain protein 81 -0.318 -0.130
139 249983_at AT5G18470 [Curculin-like (mannose-binding) lectin family protein] -0.316 0.252
140 249059_at AT5G44530 [Subtilase family protein] -0.312 0.272
141 261203_at AT1G12845 unknown -0.311 0.042
142 255645_at AT4G00880 SAUR31, SMALL AUXIN UPREGULATED RNA 31 -0.305 0.146
143 247553_at AT5G60910 AGL8, AGAMOUS-like 8, FUL, FRUITFULL -0.305 -0.776
144 248961_at AT5G45650 [subtilase family protein] -0.301 1.163
145 254037_at AT4G25760 ATGDU2, glutamine dumper 2, GDU2, glutamine dumper 2 -0.300 -1.391
146 248807_at AT5G47500 PME5, pectin methylesterase 5 -0.299 -0.339
147 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] -0.299 -0.410
148 251919_at AT3G53800 Fes1B, Fes1B -0.299 0.802
149 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] -0.294 -0.310
150 248370_at AT5G52170 HDG7, homeodomain GLABROUS 7 -0.291 -0.739
151 248794_at AT5G47220 ATERF-2, ETHYLENE RESPONSE FACTOR- 2, ATERF2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ERF2, ethylene responsive element binding factor 2 -0.290 -0.907
152 253515_at AT4G31320 SAUR37, SMALL AUXIN UPREGULATED RNA 37 -0.289 0.843
153 256574_at AT3G14780 unknown -0.287 -1.356
154 266561_at AT2G23960 [Class I glutamine amidotransferase-like superfamily protein] -0.287 -1.149
155 250942_at AT5G03350 [Legume lectin family protein] -0.284 -0.419
156 264626_at AT1G65620 AS2, ASYMMETRIC LEAVES 2 -0.284 -0.176
157 262969_at AT1G75710 [C2H2-like zinc finger protein] -0.283 0.686
158 253837_at AT4G27850 [Glycine-rich protein family] -0.283 -0.885
159 258332_at AT3G16180 NRT1.12, nitrate transporter 1.12 -0.278 0.191
160 259163_at AT3G01490 [Protein kinase superfamily protein] -0.277 -0.218
161 251317_at AT3G61490 [Pectin lyase-like superfamily protein] -0.276 0.427
162 250493_at AT5G09800 [ARM repeat superfamily protein] -0.273 -0.927
163 262752_at AT1G16330 CYCB3;1, cyclin b3;1 -0.272 -0.096
164 245399_at AT4G17340 DELTA-TIP2, TIP2;2, tonoplast intrinsic protein 2;2 -0.269 -0.447
165 245980_at AT5G13140 [Pollen Ole e 1 allergen and extensin family protein] -0.267 0.942
166 252882_at AT4G39675 unknown -0.265 0.968
167 260558_at AT2G43600 [Chitinase family protein] -0.259 -0.503
168 266736_at AT2G46960 CYP709B1, cytochrome P450, family 709, subfamily B, polypeptide 1 -0.258 -0.718
169 250764_at AT5G05960 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.255 -1.231
170 260957_at AT1G06080 ADS1, delta 9 desaturase 1, AtADS1 -0.252 0.386
171 249190_at AT5G42750 BKI1, BRI1 kinase inhibitor 1 -0.250 -0.404
172 258596_at AT3G04510 LSH2, LIGHT SENSITIVE HYPOCOTYLS 2 -0.249 0.062
173 258611_at AT3G02860 [zinc ion binding] -0.248 -0.207
174 258560_at AT3G06020 FAF4, FANTASTIC FOUR 4 -0.245 -0.183
175 255578_at AT4G01450 UMAMIT30, Usually multiple acids move in and out Transporters 30 -0.243 1.024
176 246429_at AT5G17450 HIPP21, heavy metal associated isoprenylated plant protein 21 -0.242 -0.004
177 264313_at AT1G70410 ATBCA4, BETA CARBONIC ANHYDRASE 4, BCA4, beta carbonic anhydrase 4, CA4, BETA CARBONIC ANHYDRASE 4 -0.240 0.021
178 263452_at AT2G22190 TPPE, trehalose-6-phosphate phosphatase E -0.238 -0.034
179 257026_at AT3G19200 unknown -0.237 -0.152
180 260434_at AT1G68330 unknown -0.235 -0.179
181 259171_at AT3G03590 [SWIB/MDM2 domain superfamily protein] -0.234 -0.636
182 266280_at AT2G29260 [NAD(P)-binding Rossmann-fold superfamily protein] -0.231 0.448
183 251592_at AT3G57670 NTT, NO TRANSMITTING TRACT, WIP2, WIP domain protein 2 -0.231 -1.039
184 247038_at AT5G67160 EPS1, ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 -0.230 -0.130
185 263610_at AT2G16230 [O-Glycosyl hydrolases family 17 protein] -0.230 -0.104