4.0:Information of module
IPT8 mutant tZ 12h
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 2.216e-07
GO:0009735 response to cytokinin BP 1.643e-05
GO:0009744 response to sucrose BP 2.607e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006412 translation BP 3.700e-15
GO:0009058 biosynthetic process BP 2.130e-13
GO:1901576 organic substance biosynthetic process BP 4.499e-12
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
IPT8 mutant tZ 12h		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 256602_at AT3G28310 unknown 0.865 0.023
2 253164_at AT4G35725 unknown 0.864 -1.191
3 259388_at AT1G13420 ATST4B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 4B, ST4B, sulfotransferase 4B 0.818 -0.610
4 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 0.781 0.282
5 245353_at AT4G16000 unknown 0.758 -0.968
6 247754_at AT5G59080 unknown 0.756 -0.198
7 256631_at AT3G28320 unknown 0.744 -0.671
8 246825_at AT5G26260 [TRAF-like family protein] 0.737 0.418
9 246833_at AT5G26620 unknown 0.692 -0.838
10 264404_at AT2G25160 CYP82F1, cytochrome P450, family 82, subfamily F, polypeptide 1 0.666 -0.958
11 258897_at AT3G05730 [LOCATED IN: endomembrane system] 0.607 -0.826
12 245713_at AT5G04370 NAMT1 0.594 -1.107
13 251755_at AT3G55790 unknown 0.576 -1.407
14 247956_at AT5G56970 ATCKX3, CKX3, cytokinin oxidase 3 0.541 -0.445
15 250223_at AT5G14070 ROXY2 0.529 -0.640
16 266270_at AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 0.519 -0.912
17 261834_at AT1G10640 [Pectin lyase-like superfamily protein] 0.514 -0.888
18 253839_at AT4G27890 [HSP20-like chaperones superfamily protein] 0.503 -0.410
19 262704_at AT1G16530 ASL9, ASYMMETRIC LEAVES 2-like 9, LBD3, LOB DOMAIN-CONTAINING PROTEIN 3 0.486 0.571
20 255385_at AT4G03610 [Metallo-hydrolase/oxidoreductase superfamily protein] 0.485 -0.083
21 259653_at AT1G55240 unknown 0.480 -1.144
22 251992_at AT3G53350 MIDD1, Microtubule Depletion Domain 1, RIP3, ROP interactive partner 3, RIP4, ROP interactive partner 4 0.473 0.000
23 264790_at AT2G17820 AHK1, ATHK1, histidine kinase 1, HK1, histidine kinase 1 0.464 -0.136
24 265083_at AT1G03820 unknown 0.455 -0.379
25 246251_at AT4G37220 [Cold acclimation protein WCOR413 family] 0.451 -0.828
26 263594_at AT2G01880 ATPAP7, PURPLE ACID PHOSPHATASE 7, PAP7, purple acid phosphatase 7 0.448 -0.462
27 252639_at AT3G44550 FAR5, fatty acid reductase 5 0.444 -0.683
28 257778_at AT3G29220 unknown 0.443 -0.333
29 249454_at AT5G39520 unknown 0.439 -0.614
30 267414_at AT2G34790 EDA28, EMBRYO SAC DEVELOPMENT ARREST 28, MEE23, MATERNAL EFFECT EMBRYO ARREST 23 0.429 -0.919
31 252433_at AT3G47560 [alpha/beta-Hydrolases superfamily protein] 0.421 -0.080
32 258938_at AT3G10080 [RmlC-like cupins superfamily protein] 0.416 0.511
33 259586_at AT1G28100 unknown 0.415 0.528
34 253774_at AT4G28530 anac074, NAC domain containing protein 74, NAC074, NAC domain containing protein 74 0.405 -0.359
35 264527_at AT1G30760 [FAD-binding Berberine family protein] 0.403 -0.361
36 259129_at AT3G02150 PTF1, plastid transcription factor 1, TCP13, TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 13, TFPD 0.401 -0.597
37 245560_at AT4G15480 UGT84A1 0.398 -0.128
38 254111_at AT4G24890 ATPAP24, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24, PAP24, purple acid phosphatase 24 0.392 -1.015
39 256713_at AT2G34060 [Peroxidase superfamily protein] 0.387 -0.552
40 254632_at AT4G18630 unknown 0.384 -1.353
41 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 0.381 -0.692
42 258618_at AT3G02885 GASA5, GAST1 protein homolog 5 0.381 -0.065
43 266054_at AT2G40640 [RING/U-box superfamily protein] 0.378 -0.286
44 267058_at AT2G32510 MAPKKK17, mitogen-activated protein kinase kinase kinase 17 0.377 -0.418
45 253819_at AT4G28350 LecRK-VII.2, L-type lectin receptor kinase VII.2 0.375 -1.182
46 267389_at AT2G44460 BGLU28, beta glucosidase 28 0.371 -0.448
47 258625_at AT3G04370 PDLP4, plasmodesmata-located protein 4 0.362 0.069
48 260333_at AT1G70500 [Pectin lyase-like superfamily protein] 0.361 -1.043
49 249750_at AT5G24570 unknown 0.359 0.735
50 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 0.358 -0.045
51 263282_at AT2G14095 unknown 0.344 -0.220
52 267344_at AT2G44230 unknown 0.336 -0.437
53 263380_at AT2G40200 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.329 -0.136
54 254210_at AT4G23450 AIRP1, ABA Insensitive RING Protein 1, AtAIRP1 0.320 -1.200
55 254453_at AT4G21120 AAT1, amino acid transporter 1, CAT1, CATIONIC AMINO ACID TRANSPORTER 1 0.318 0.210
56 260643_at AT1G53270 ABCG10, ATP-binding cassette G10 0.317 -1.267
57 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.316 0.201
58 252626_at AT3G44940 unknown 0.313 0.134
59 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.311 -0.707
60 258901_at AT3G05640 [Protein phosphatase 2C family protein] 0.308 -0.131
61 262454_at AT1G11190 BFN1, bifunctional nuclease i, ENDO1, ENDONUCLEASE 1 0.308 -0.137
62 252202_at AT3G50300 [HXXXD-type acyl-transferase family protein] 0.307 -0.367
63 249797_at AT5G23750 [Remorin family protein] 0.304 0.350
64 262940_at AT1G79520 [Cation efflux family protein] 0.303 -0.145
65 266321_at AT2G46660 CYP78A6, cytochrome P450, family 78, subfamily A, polypeptide 6, EOD3, enhancer of da1-1 0.303 0.193
66 263028_at AT1G24030 [Protein kinase superfamily protein] 0.297 -0.513
67 258287_at AT3G15990 SULTR3;4, sulfate transporter 3;4 0.290 0.134
68 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 0.289 -0.372
69 255881_at AT1G67070 DIN9, DARK INDUCIBLE 9, PMI2, PHOSPHOMANNOSE ISOMERASE 2 0.286 -0.035
70 261934_at AT1G22400 ATUGT85A1, ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UGT85A1 0.284 0.205
71 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 0.284 0.231
72 257288_at AT3G29670 PMAT2, phenolic glucoside malonyltransferase 2 0.284 -1.321
73 265468_at AT2G37210 LOG3, LONELY GUY 3 0.279 0.125
74 262212_at AT1G74890 ARR15, response regulator 15 0.278 -0.848
75 267637_at AT2G42190 unknown 0.277 0.176
76 252175_at AT3G50700 AtIDD2, indeterminate(ID)-domain 2, IDD2, indeterminate(ID)-domain 2 0.276 -0.499
77 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] 0.275 0.153
78 263236_at AT1G10470 ARR4, response regulator 4, ATRR1, RESPONCE REGULATOR 1, IBC7, INDUCED BY CYTOKININ 7, MEE7, maternal effect embryo arrest 7 0.271 0.760
79 260837_at AT1G43670 AtcFBP, Arabidopsis thaliana cytosolic fructose-1,6-bisphosphatase, FBP, fructose-1,6-bisphosphatase, FINS1, FRUCTOSE INSENSITIVE 1 0.266 1.207
80 254328_at AT4G22570 APT3, adenine phosphoribosyl transferase 3 0.263 0.068
81 256965_at AT3G13450 DIN4, DARK INDUCIBLE 4 0.261 0.240
82 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 0.261 -0.525
83 251766_at AT3G55910 unknown 0.260 0.184
84 247406_at AT5G62920 ARR6, response regulator 6 0.260 -0.966
85 246488_at AT5G16010 [3-oxo-5-alpha-steroid 4-dehydrogenase family protein] 0.252 0.144
86 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.250 -0.781
87 248178_at AT5G54370 [Late embryogenesis abundant (LEA) protein-related] -0.845 -0.031
88 260230_at AT1G74500 ATBS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, bHLH135, basic helix-loop-helix protein 135, BS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, PRE3, PACLOBUTRAZOL RESISTANCE 3, TMO7, TARGET OF MONOPTEROS 7 -0.760 0.370
89 247337_at AT5G63660 LCR74, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 74, PDF2.5 -0.738 -0.162
90 250469_at AT5G10130 [Pollen Ole e 1 allergen and extensin family protein] -0.714 -0.349
91 247634_at AT5G60520 [Late embryogenesis abundant (LEA) protein-related] -0.710 0.479
92 255111_at AT4G08780 [Peroxidase superfamily protein] -0.669 -0.928
93 266209_at AT2G27550 ATC, centroradialis -0.646 -0.445
94 261576_at AT1G01070 UMAMIT28, Usually multiple acids move in and out Transporters 28 -0.598 -0.120
95 262396_at AT1G49470 unknown -0.560 1.325
96 251928_at AT3G53980 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.557 0.121
97 255751_at AT1G31950 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.554 -0.431
98 263373_at AT2G20515 unknown -0.546 0.323
99 250002_at AT5G18690 AGP25, arabinogalactan protein 25, ATAGP25, ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEINS 25 -0.544 -0.016
100 262045_at AT1G80240 DGR1, DUF642 L-GalL responsive gene 1 -0.517 -0.847
101 247922_at AT5G57500 [Galactosyltransferase family protein] -0.514 0.220
102 260077_at AT1G73620 [Pathogenesis-related thaumatin superfamily protein] -0.508 0.232
103 265769_at AT2G48090 unknown -0.497 -0.837
104 260076_at AT1G73630 [EF hand calcium-binding protein family] -0.490 -0.715
105 264565_at AT1G05280 unknown -0.490 -0.227
106 262728_at AT1G75820 ATCLV1, CLV1, CLAVATA 1, FAS3, FASCIATA 3, FLO5, FLOWER DEVELOPMENT 5 -0.489 -0.145
107 251524_at AT3G58990 IPMI1, isopropylmalate isomerase 1 -0.481 -0.270
108 257375_at AT2G38640 unknown -0.478 -0.920
109 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.473 -0.208
110 245736_at AT1G73330 ATDR4, drought-repressed 4, DR4, drought-repressed 4 -0.472 -0.260
111 263867_at AT2G36830 GAMMA-TIP, gamma tonoplast intrinsic protein, GAMMA-TIP1, GAMMA TONOPLAST INTRINSIC PROTEIN 1, TIP1;1, TONOPLAST INTRINSIC PROTEIN 1;1 -0.467 0.537
112 245555_at AT4G15390 [HXXXD-type acyl-transferase family protein] -0.455 1.264
113 261004_at AT1G26450 [Carbohydrate-binding X8 domain superfamily protein] -0.451 -0.588
114 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.443 -0.523
115 266222_at AT2G28780 unknown -0.435 -0.244
116 260144_at AT1G71960 ABCG25, ATP-binding casette G25, ATABCG25, Arabidopsis thaliana ATP-binding cassette G25 -0.433 0.136
117 262154_at AT1G52700 [alpha/beta-Hydrolases superfamily protein] -0.421 -0.689
118 263481_at AT2G04025 GLV7, GOLVEN 7, RGF3, root meristem growth factor 3 -0.419 0.105
119 250231_at AT5G13910 LEP, LEAFY PETIOLE -0.414 0.419
120 258293_at AT3G23430 ATPHO1, ARABIDOPSIS PHOSPHATE 1, PHO1, phosphate 1 -0.413 -0.052
121 255110_at AT4G08770 Prx37, peroxidase 37 -0.406 0.290
122 248626_at AT5G48940 [Leucine-rich repeat transmembrane protein kinase family protein] -0.402 0.821
123 253483_at AT4G31910 BAT1, BR-related AcylTransferase1, PIZ, PIZZA -0.394 -0.819
124 247753_at AT5G59070 [UDP-Glycosyltransferase superfamily protein] -0.390 0.184
125 263795_at AT2G24610 ATCNGC14, cyclic nucleotide-gated channel 14, CNGC14, cyclic nucleotide-gated channel 14 -0.387 0.783
126 250438_at AT5G10580 unknown -0.383 0.014
127 266737_at AT2G47140 AtSDR5, SDR5, short-chain dehydrogenase reductase 5 -0.378 0.351
128 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.371 0.128
129 260812_at AT1G43650 UMAMIT22, Usually multiple acids move in and out Transporters 22 -0.364 -0.636
130 261606_at AT1G49570 [Peroxidase superfamily protein] -0.363 0.313
131 253657_at AT4G30110 ATHMA2, ARABIDOPSIS HEAVY METAL ATPASE 2, HMA2, heavy metal atpase 2 -0.357 -1.142
132 251394_at AT3G60900 FLA10, FASCICLIN-like arabinogalactan-protein 10 -0.355 0.022
133 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.353 1.226
134 248467_at AT5G50800 AtSWEET13, SWEET13 -0.342 0.089
135 249136_at AT5G43180 unknown -0.339 0.044
136 248942_at AT5G45480 unknown -0.335 0.316
137 266125_at AT2G45050 GATA2, GATA transcription factor 2 -0.335 0.136
138 267636_at AT2G42110 unknown -0.334 -0.363
139 258362_at AT3G14280 unknown -0.331 -0.760
140 256621_at AT3G24450 [Heavy metal transport/detoxification superfamily protein ] -0.328 0.466
141 246016_at AT5G10720 AHK5, histidine kinase 5, CKI2, CYTOKININ INDEPENDENT 2, HK5, histidine kinase 5 -0.328 0.762
142 246814_at AT5G27200 ACP5, acyl carrier protein 5 -0.325 -1.210
143 253786_at AT4G28650 [Leucine-rich repeat transmembrane protein kinase family protein] -0.322 -0.565
144 251373_at AT3G60530 GATA4, GATA transcription factor 4 -0.314 0.275
145 246274_at AT4G36620 GATA19, GATA transcription factor 19, HANL2, hanaba taranu like 2 -0.310 -1.011
146 257021_at AT3G19710 BCAT4, branched-chain aminotransferase4 -0.308 -0.455
147 247038_at AT5G67160 EPS1, ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 -0.305 -0.130
148 247549_at AT5G61420 AtMYB28, HAG1, HIGH ALIPHATIC GLUCOSINOLATE 1, MYB28, myb domain protein 28, PMG1, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1 -0.304 0.228
149 266008_at AT2G37390 NAKR2, SODIUM POTASSIUM ROOT DEFECTIVE 2 -0.303 -0.164
150 254235_at AT4G23750 CRF2, cytokinin response factor 2, TMO3, TARGET OF MONOPTEROS 3 -0.299 0.048
151 245488_at AT4G16270 [Peroxidase superfamily protein] -0.296 0.298
152 262575_at AT1G15210 ABCG35, ATP-binding cassette G35, ATPDR7, PLEIOTROPIC DRUG RESISTANCE 7, PDR7, pleiotropic drug resistance 7 -0.292 1.039
153 260523_at AT2G41720 EMB2654, EMBRYO DEFECTIVE 2654 -0.285 -0.068
154 265688_at AT2G24300 [Calmodulin-binding protein] -0.283 0.629
155 258867_at AT3G03130 unknown -0.280 -0.158
156 249206_at AT5G42630 ATS, ABERRANT TESTA SHAPE, KAN4, KANADI 4 -0.277 -0.080
157 247904_at AT5G57390 AIL5, AINTEGUMENTA-like 5, CHO1, CHOTTO 1, EMK, EMBRYOMAKER, PLT5, PLETHORA 5 -0.275 0.869
158 260539_at AT2G43480 [Peroxidase superfamily protein] -0.273 -0.180
159 260181_at AT1G70710 ATGH9B1, glycosyl hydrolase 9B1, CEL1, CELLULASE 1, GH9B1, glycosyl hydrolase 9B1 -0.272 0.603
160 247615_at AT5G60250 [zinc finger (C3HC4-type RING finger) family protein] -0.259 -0.332
161 260389_at AT1G74055 unknown -0.259 -0.564
162 253914_at AT4G27400 [Late embryogenesis abundant (LEA) protein-related] -0.258 -0.863
163 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 -0.255 -0.039
164 260957_at AT1G06080 ADS1, delta 9 desaturase 1, AtADS1 -0.252 0.386
165 260329_at AT1G80370 CYCA2;4, Cyclin A2;4 -0.251 -0.246
166 251890_at AT3G54220 SCR, SCARECROW, SGR1, SHOOT GRAVITROPISM 1 -0.250 0.163
167 267006_at AT2G34190 [Xanthine/uracil permease family protein] -0.249 0.299
168 260483_at AT1G11000 ATMLO4, MILDEW RESISTANCE LOCUS O 4, MLO4, MILDEW RESISTANCE LOCUS O 4 -0.245 -0.237
169 262969_at AT1G75710 [C2H2-like zinc finger protein] -0.244 0.686
170 254363_at AT4G22010 sks4, SKU5 similar 4 -0.243 0.473
171 264466_at AT1G10380 [Putative membrane lipoprotein] -0.240 -0.786