4.0:Information of module
Dark
In comparison with Col-0 SA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0032504 multicellular organism reproduction BP 2.750e-04
GO:0048609 multicellular organismal reproductive pr... BP 4.670e-04
GO:0007276 gamete generation BP 1.062e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006875 cellular metal ion homeostasis BP 3.639e-03
GO:0098771 inorganic ion homeostasis BP 4.573e-03
GO:0046916 cellular transition metal ion homeostasi... BP 5.872e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Dark		 Log2 signal ratio
Col-0 SA
1 257654_at AT3G13310 DJC66, DNA J protein C66 0.688 0.122
2 257226_at AT3G27880 unknown 0.248 0.261
3 257158_at AT3G24360 [ATP-dependent caseinolytic (Clp) protease/crotonase family protein] 0.192 -0.113
4 252427_at AT3G47640 PYE, POPEYE 0.177 -0.048
5 250572_at AT5G08210 MIR834A, microRNA834A 0.169 0.134
6 255868_at AT2G30380 unknown 0.145 0.068
7 253733_at AT4G29170 ATMND1 0.145 0.072
8 264502_at AT1G09400 [FMN-linked oxidoreductases superfamily protein] 0.143 0.168
9 262766_at AT1G13160 [ARM repeat superfamily protein] 0.129 0.086
10 257031_at AT3G19280 ATFUT11, FUCT1, FUCTA, FUT11, fucosyltransferase 11 0.119 0.089
11 260641_at AT1G53200 unknown 0.118 0.063
12 245296_at AT4G16370 oligopeptide transporter 0.117 0.000
13 249819_at AT5G23640 unknown 0.116 0.138
14 259210_at AT3G09150 ATHY2, ARABIDOPSIS ELONGATED HYPOCOTYL 2, GUN3, GENOMES UNCOUPLED 3, HY2, ELONGATED HYPOCOTYL 2 0.113 0.019
15 256591_at AT3G31910 unknown 0.112 0.038
16 244905_at ATMG00680 ORF122C 0.110 0.231
17 256266_at AT3G12320 LNK3, night light-inducible and clock-regulated 3 -0.348 0.003
18 250665_at AT5G06980 LNK4, night light-inducible and clock-regulated 4 -0.314 -0.047
19 245840_at AT1G58420 [Uncharacterised conserved protein UCP031279] -0.314 -0.128
20 250664_at AT5G07080 [HXXXD-type acyl-transferase family protein] -0.246 -0.194
21 256442_at AT3G10930 unknown -0.195 -0.029
22 252250_at AT3G49790 [Carbohydrate-binding protein] -0.184 -0.153
23 254327_at AT4G22490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.174 -0.087
24 260206_at AT1G70740 [Protein kinase superfamily protein] -0.161 -0.001
25 249306_at AT5G41400 [RING/U-box superfamily protein] -0.147 -0.079
26 261407_at AT1G18810 [phytochrome kinase substrate-related] -0.132 -0.257
27 252179_at AT3G50760 GATL2, galacturonosyltransferase-like 2 -0.130 -0.045
28 267246_at AT2G30250 ATWRKY25, WRKY25, WRKY DNA-binding protein 25 -0.127 -0.031
29 256570_at AT3G19540 unknown -0.123 -0.170
30 245352_at AT4G15490 UGT84A3 -0.121 0.147
31 248934_at AT5G46080 [Protein kinase superfamily protein] -0.120 -0.158
32 248140_at AT5G54980 [Uncharacterised protein family (UPF0497)] -0.111 -0.107