4.0:Information of module
Control KNO3 roots - 2hours
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010167 response to nitrate BP 1.109e-04
GO:0010054 trichoblast differentiation BP 2.422e-04
GO:0007033 vacuole organization BP 2.609e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048507 meristem development BP 2.749e-09
GO:1902589 single-organism organelle organization BP 2.900e-07
GO:0048519 negative regulation of biological proces... BP 4.304e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Control KNO3 roots - 2hours		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 250472_at AT5G10210 unknown 0.520 0.007
2 259813_at AT1G49860 ATGSTF14, glutathione S-transferase (class phi) 14, GSTF14, glutathione S-transferase (class phi) 14 0.463 0.019
3 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 0.445 -0.142
4 266372_at AT2G41310 ARR8, RESPONSE REGULATOR 8, ATRR3, response regulator 3, RR3, response regulator 3 0.309 0.068
5 257645_at AT3G25790 [myb-like transcription factor family protein] 0.300 -0.003
6 247443_at AT5G62720 [Integral membrane HPP family protein] 0.261 0.118
7 265766_at AT2G48080 [oxidoreductase, 2OG-Fe(II) oxygenase family protein] 0.247 0.089
8 258501_at AT3G06780 [glycine-rich protein] 0.242 0.148
9 263182_at AT1G05575 unknown 0.241 -0.034
10 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.238 0.080
11 265475_at AT2G15620 ATHNIR, ARABIDOPSIS THALIANA NITRITE REDUCTASE, NIR, NITRITE REDUCTASE, NIR1, nitrite reductase 1 0.225 -0.083
12 259071_at AT3G11650 NHL2, NDR1/HIN1-like 2 0.221 0.054
13 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] 0.217 0.059
14 258432_at AT3G16570 ATRALF23, ARABIDOPSIS RAPID ALKALINIZATION FACTOR 23, RALF23, rapid alkalinization factor 23 0.216 0.043
15 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 0.215 0.002
16 250597_at AT5G07680 ANAC079, Arabidopsis NAC domain containing protein 79, ANAC080, NAC domain containing protein 80, ATNAC4, NAC080, NAC domain containing protein 80, NAC4 0.209 -0.125
17 255734_at AT1G25550 [myb-like transcription factor family protein] 0.200 -0.066
18 263319_at AT2G47160 AtBOR1, BOR1, REQUIRES HIGH BORON 1 0.200 0.042
19 245657_at AT1G56720 [Protein kinase superfamily protein] 0.195 0.008
20 259625_at AT1G42970 GAPB, glyceraldehyde-3-phosphate dehydrogenase B subunit 0.193 0.244
21 261958_at AT1G64500 [Glutaredoxin family protein] 0.188 -0.082
22 256799_at AT3G18560 unknown 0.186 -0.020
23 255479_at AT4G02380 AtLEA5, Arabidopsis thaliana late embryogenensis abundant like 5, SAG21, senescence-associated gene 21 0.186 -0.117
24 256537_at AT1G33340 [ENTH/ANTH/VHS superfamily protein] 0.185 -0.084
25 251062_at AT5G01840 ATOFP1, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, OFP1, ovate family protein 1 0.185 -0.092
26 253400_at AT4G32860 unknown 0.184 0.313
27 255381_at AT4G03510 ATRMA1, RMA1, RING membrane-anchor 1 0.179 0.118
28 254027_at AT4G25835 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.174 -0.304
29 266913_at AT2G45890 ATROPGEF4, RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 4, GEF4, guanine exchange factor 4, RHS11, ROOT HAIR SPECIFIC 11, ROPGEF4, ROP (rho of plants) guanine nucleotide exchange factor 4 0.174 -0.065
30 265620_at AT2G27310 [F-box family protein] 0.173 -0.134
31 258742_at AT3G05800 AIF1, AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 0.171 -0.009
32 247406_at AT5G62920 ARR6, response regulator 6 0.171 -0.079
33 258437_at AT3G16560 [Protein phosphatase 2C family protein] 0.167 0.116
34 262180_at AT1G78050 PGM, phosphoglycerate/bisphosphoglycerate mutase 0.165 -0.358
35 260753_at AT1G49230 AtATL78, ATL78, Arabidopsis T?xicos en Levadura 78 0.164 0.030
36 265057_at AT1G52140 unknown 0.162 0.076
37 263836_at AT2G40330 PYL6, PYR1-like 6, RCAR9, regulatory components of ABA receptor 9 0.160 0.004
38 249325_at AT5G40850 UPM1, urophorphyrin methylase 1 0.158 -0.414
39 262284_at AT1G68670 [myb-like transcription factor family protein] 0.157 0.098
40 251788_at AT3G55420 unknown 0.152 -0.055
41 253822_at AT4G28410 RSA1, Root System Architecture 1 0.150 0.034
42 256412_at AT3G11220 ELO1, ELONGATA 1 0.150 -0.175
43 256891_at AT3G19030 unknown 0.149 -0.350
44 258275_at AT3G15760 unknown 0.146 -0.067
45 259738_at AT1G64355 unknown 0.144 -0.062
46 262406_at AT1G34670 AtMYB93, myb domain protein 93, MYB93, myb domain protein 93 0.142 0.249
47 252859_at AT4G39780 [Integrase-type DNA-binding superfamily protein] 0.142 0.005
48 252983_at AT4G37980 ATCAD7, CAD7, CINNAMYL-ALCOHOL DEHYDROGENASE 7, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-1, elicitor-activated gene 3-1 0.140 -0.060
49 254918_at AT4G11260 ATSGT1B, EDM1, ENHANCED DOWNY MILDEW 1, ETA3, ENHANCER OF TIR1-1 AUXIN RESISTANCE 3, RPR1, SGT1B 0.140 -0.102
50 259896_at AT1G71500 [Rieske (2Fe-2S) domain-containing protein] 0.139 -0.041
51 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.139 0.043
52 247405_at AT5G62880 ARAC10, RAC-like 10, ATRAC10, ARABIDOPSIS THALIANA RAC-LIKE 10, ATROP11, RHO-RELATED PROTEIN FROM PLANTS 11, RAC10, RAC-like 10, ROP11, RHO-related protein from plants 11 0.138 -0.021
53 264794_at AT1G08670 [ENTH/VHS family protein] 0.137 0.054
54 261791_at AT1G16170 unknown 0.136 0.039
55 261029_at AT1G17330 [Metal-dependent phosphohydrolase] 0.136 0.035
56 265173_at AT1G23530 unknown 0.134 0.069
57 250463_at AT5G10030 OBF4, OCS ELEMENT BINDING FACTOR 4, TGA4, TGACG motif-binding factor 4 0.132 -0.016
58 256063_at AT1G07130 ATSTN1, STN1 0.132 -0.082
59 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 0.131 0.037
60 244983_at ATCG00790 RPL16, ribosomal protein L16 -0.229 0.210
61 258285_at AT3G16140 PSAH-1, photosystem I subunit H-1 -0.189 -0.007
62 255957_at AT1G22160 unknown -0.188 -0.024
63 264144_at AT1G79320 AtMC6, metacaspase 6, AtMCP2c, metacaspase 2c, MC6, metacaspase 6, MCP2c, metacaspase 2c -0.175 -0.005
64 247782_at AT5G58790 unknown -0.171 -0.124
65 265483_at AT2G15790 CYP40, CYCLOPHILIN 40, SQN, SQUINT -0.170 0.206
66 263441_at AT2G28620 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.165 -0.027
67 260097_at AT1G73220 AtOCT1, organic cation/carnitine transporter1, OCT1, organic cation/carnitine transporter1 -0.164 -0.140
68 247115_at AT5G65930 KCBP, KINESIN-LIKE CALMODULIN-BINDING PROTEIN, PKCBP, POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, ZWI, ZWICHEL -0.157 -0.258
69 260565_at AT2G43800 [Actin-binding FH2 (formin homology 2) family protein] -0.157 0.209
70 257973_at AT3G20720 unknown -0.150 0.075
71 264325_at AT1G04150 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.149 0.057
72 247532_at AT5G61560 [U-box domain-containing protein kinase family protein] -0.146 0.113
73 262722_at AT1G43620 TT15, TRANSPARENT TESTA 15, UGT80B1 -0.144 -0.021
74 252431_at AT3G47700 MAG2, maigo2 -0.143 -0.272
75 259762_at AT1G77600 [ARM repeat superfamily protein] -0.142 0.101
76 249162_at AT5G42765 unknown -0.140 0.165
77 260768_at AT1G49245 [Prefoldin chaperone subunit family protein] -0.139 0.081
78 248427_at AT5G51750 ATSBT1.3, subtilase 1.3, SBT1.3, subtilase 1.3 -0.139 0.083
79 246551_at AT5G15070 [Phosphoglycerate mutase-like family protein] -0.138 -0.293
80 264336_at AT1G70360 [F-box family protein] -0.138 0.001
81 256864_at AT3G23890 ATTOPII, TOPII, topoisomerase II -0.135 -0.196
82 261544_at AT1G63540 [hydroxyproline-rich glycoprotein family protein] -0.128 0.088
83 246335_at AT3G44880 ACD1, ACCELERATED CELL DEATH 1, LLS1, LETHAL LEAF-SPOT 1 HOMOLOG, PAO, PHEOPHORBIDE A OXYGENASE -0.126 -0.086
84 264206_at AT1G22730 [MA3 domain-containing protein] -0.126 -0.029
85 265206_at AT2G36670 [Eukaryotic aspartyl protease family protein] -0.124 -0.075
86 254876_at AT4G11610 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.124 -0.226
87 248452_at AT5G51300 [splicing factor-related] -0.123 0.144
88 267406_at AT2G34780 EMB1611, EMBRYO DEFECTIVE 1611, MEE22, MATERNAL EFFECT EMBRYO ARREST 22 -0.122 0.094
89 267452_at AT2G33860 ARF3, AUXIN RESPONSE TRANSCRIPTION FACTOR 3, ETT, ETTIN -0.121 0.061
90 249409_at AT5G40340 [Tudor/PWWP/MBT superfamily protein] -0.120 0.253
91 248592_at AT5G49280 [hydroxyproline-rich glycoprotein family protein] -0.120 -0.024
92 255294_at AT4G04750 [Major facilitator superfamily protein] -0.115 0.005
93 255562_at AT4G02070 ATMSH6, ARABIDOPSIS THALIANA MUTS HOMOLOG 6, MSH6, MUTS homolog 6, MSH6-1, MUTS HOMOLOG 6-1 -0.114 -0.027
94 262859_at AT1G64790 ILA, ILITYHIA -0.113 -0.004
95 264621_at AT2G17700 STY8, serine/threonine/tyrosine kinase 8 -0.112 0.057
96 244978_at ATCG00740 RPOA, RNA polymerase subunit alpha -0.111 0.271
97 264992_at AT1G67300 [Major facilitator superfamily protein] -0.111 0.045
98 259540_at AT1G20640 NLP4, NIN-like protein 4 -0.111 -0.204
99 246760_at AT5G27970 [ARM repeat superfamily protein] -0.108 0.018
100 245677_at AT1G56660 unknown -0.107 -0.147
101 262587_at AT1G15490 [alpha/beta-Hydrolases superfamily protein] -0.107 0.039
102 259797_at AT1G64410 unknown -0.106 -0.006
103 247957_at AT5G57050 ABI2, ABA INSENSITIVE 2, AtABI2 -0.106 0.200
104 246510_at AT5G15410 ATCNGC2, CYCLIC NUCLEOTIDE-GATED CHANNEL 2, CNGC2, CYCLIC NUCLEOTIDE GATED CHANNEL 2, DND1, DEFENSE NO DEATH 1 -0.106 -0.065
105 255080_at AT4G09030 AGP10, arabinogalactan protein 10, ATAGP10 -0.106 0.006
106 262937_at AT1G79560 EMB1047, EMBRYO DEFECTIVE 1047, EMB156, EMBRYO DEFECTIVE 156, EMB36, EMBRYO DEFECTIVE 36, FTSH12, FTSH protease 12 -0.106 -0.096
107 265476_at AT2G15570 ATHM3, ATM3, Arabidopsis thioredoxin M-type 3, GAT1, GFP ARRESTED TRAFFICKING 1, TRX-M3, THIOREDOXIN-M3 -0.105 0.034
108 245914_at AT5G19620 ATOEP80, ARABIDOPSIS THALIANA OUTER ENVELOPE PROTEIN OF 80 KDA, EMB213, EMBRYO DEFECTIVE 213, OEP80, outer envelope protein of 80 kDa, TOC75-V, translocon at the outer envelope membrane of chloroplasts 75-V -0.103 0.201
109 246059_at AT5G08450 HDC1, Histone Deacetylation Complex 1, RXT3-like, RXT3-like -0.103 0.076
110 261347_at AT1G79730 ELF7, EARLY FLOWERING 7 -0.102 -0.243
111 246501_at AT5G16280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.101 -0.156
112 265309_at AT2G20290 ATXIG, MYOSIN XI G, XIG, myosin-like protein XIG -0.101 -0.090
113 262800_at AT1G20960 emb1507, embryo defective 1507 -0.101 0.153
114 254137_at AT4G24930 [thylakoid lumenal 17.9 kDa protein, chloroplast] -0.100 -0.068
115 254304_at AT4G22270 ATMRB1, ARABIDOPSIS MEMBRANE RELATED BIGGER1, MRB1, MEMBRANE RELATED BIGGER1 -0.100 -0.028
116 257961_at AT3G19780 [LOCATED IN: endomembrane system] -0.100 -0.002
117 256045_at AT1G07150 MAPKKK13, mitogen-activated protein kinase kinase kinase 13 -0.098 0.035