4.0:Information of module
nhx5
In comparison with xyl-grown cell culture- 1h 1mM Suc help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 3.321e-10
GO:0002376 immune system process BP 3.076e-09
GO:0050896 response to stimulus BP 3.591e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009813 flavonoid biosynthetic process BP 7.919e-08
GO:0009812 flavonoid metabolic process BP 5.430e-07
GO:0010224 response to UV-B BP 6.529e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
nhx5		 Log2 signal ratio
xyl-grown cell culture- 1h 1mM Suc
1 259385_at AT1G13470 unknown 0.602 -0.020
2 251791_at AT3G55500 ATEXP16, ATEXPA16, expansin A16, ATHEXP ALPHA 1.7, EXP16, EXPANSIN 16, EXPA16, expansin A16 0.268 0.085
3 255546_at AT4G01910 [Cysteine/Histidine-rich C1 domain family protein] 0.260 -0.043
4 261167_at AT1G04980 ATPDI10, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 10, ATPDIL2-2, PDI-like 2-2, PDI10, PROTEIN DISULFIDE ISOMERASE, PDIL2-2, PDI-like 2-2 0.255 0.045
5 260411_at AT1G69890 unknown 0.230 -0.073
6 259418_at AT1G02390 ATGPAT2, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2, GPAT2, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2 0.213 -0.016
7 266569_at AT2G24080 unknown 0.212 0.011
8 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.209 0.017
9 254252_at AT4G23310 CRK23, cysteine-rich RLK (RECEPTOR-like protein kinase) 23 0.204 0.062
10 265658_at AT2G13810 ALD1, AGD2-like defense response protein 1, AtALD1, EDTS5, eds two suppressor 5 0.200 0.015
11 247216_at AT5G64860 DPE1, disproportionating enzyme 0.199 0.022
12 264680_at AT1G65510 unknown 0.186 0.052
13 250431_at AT5G10440 CYCD4;2, cyclin d4;2 0.183 0.098
14 259167_at AT3G01570 [Oleosin family protein] 0.178 0.064
15 256352_at AT1G54970 ATPRP1, proline-rich protein 1, PRP1, proline-rich protein 1, RHS7, ROOT HAIR SPECIFIC 7 0.176 -0.044
16 254933_at AT4G11130 RDR2, RNA-dependent RNA polymerase 2, SMD1, SILENCING MOVEMENT DEFICIENT 1 0.170 -0.111
17 248365_at AT5G52500 unknown 0.164 0.003
18 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.158 -0.008
19 255825_at AT2G40475 ASG8, ALTERED SEED GERMINATION 8 0.158 0.046
20 261242_at AT1G32960 ATSBT3.3, SBT3.3 0.154 -0.041
21 258139_at AT3G24520 AT-HSFC1, HSFC1, heat shock transcription factor C1 0.152 -0.023
22 254520_at AT4G19960 ATKUP9, HAK9, KT9, KUP9, K+ uptake permease 9 0.147 -0.042
23 257637_at AT3G25810 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] 0.146 0.011
24 258562_at AT3G05980 unknown 0.143 0.010
25 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.142 0.026
26 263221_at AT1G30620 HSR8, HIGH SUGAR RESPONSE8, MUR4, MURUS 4, UXE1, UDP-D-XYLOSE 4-EPIMERASE 1 0.142 0.004
27 251919_at AT3G53800 Fes1B, Fes1B 0.140 0.064
28 248450_at AT5G51290 ACD5, ACCELERATED CELL DEATH 5 0.139 0.025
29 258283_at AT3G26750 unknown 0.136 0.010
30 251144_at AT5G01210 [HXXXD-type acyl-transferase family protein] 0.135 -0.145
31 250740_at AT5G05760 ATSED5, ATSYP31, SED5, T-SNARE SED 5, SYP31, syntaxin of plants 31 0.130 0.011
32 245240_at AT1G44510 [copia-like retrotransposon family, has a 0. P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] 0.129 -0.218
33 249923_at AT5G19120 [Eukaryotic aspartyl protease family protein] 0.128 -0.097
34 249696_at AT5G35820 [copia-like retrotransposon family, has a 0. P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] 0.128 -0.015
35 252949_at AT4G38670 [Pathogenesis-related thaumatin superfamily protein] 0.127 -0.077
36 252212_at AT3G50310 MAPKKK20, mitogen-activated protein kinase kinase kinase 20, MKKK20, MAPKK kinase 20 0.127 -0.087
37 245734_at AT1G73480 [alpha/beta-Hydrolases superfamily protein] 0.127 -0.025
38 267045_at AT2G34180 ATWL2, WPL4-LIKE 2, CIPK13, CBL-interacting protein kinase 13, SnRK3.7, SNF1-RELATED PROTEIN KINASE 3.7, WL2, WPL4-LIKE 2 0.126 0.053
39 246946_at AT5G25070 unknown 0.126 -0.008
40 262504_at AT1G21750 ATPDI5, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 5, ATPDIL1-1, PDI-like 1-1, PDI5, PROTEIN DISULFIDE ISOMERASE 5, PDIL1-1, PDI-like 1-1 0.125 -0.003
41 267275_at AT2G30240 ATCHX13, CHX13, CATION/H+ EXCHANGER 13 0.124 -0.032
42 261528_at AT1G14420 AT59 0.124 -0.046
43 267597_at AT2G33020 AtRLP24, receptor like protein 24, RLP24, receptor like protein 24 0.122 0.063
44 266271_at AT2G29440 ATGSTU6, glutathione S-transferase tau 6, GST24, GLUTATHIONE S-TRANSFERASE 24, GSTU6, glutathione S-transferase tau 6 0.122 0.036
45 256428_at AT3G11080 AtRLP35, receptor like protein 35, RLP35, receptor like protein 35 0.121 -0.062
46 251480_at AT3G59710 [NAD(P)-binding Rossmann-fold superfamily protein] 0.121 0.088
47 245670_at AT1G28210 ATJ1 0.120 -0.014
48 246251_at AT4G37220 [Cold acclimation protein WCOR413 family] 0.120 0.019
49 258363_at AT3G14300 ATPME26, A. THALIANA PECTIN METHYLESTERASE 26, ATPMEPCRC, PME26, PECTIN METHYLESTERASE 26 0.120 -0.003
50 264975_at AT1G27070 5'-AMP-activated protein kinase-related 0.120 -0.021
51 258151_at AT3G18080 BGLU44, B-S glucosidase 44 0.117 -0.069
52 264500_at AT1G09370 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.115 -0.025
53 267057_at AT2G32500 [Stress responsive alpha-beta barrel domain protein] -1.169 -0.000
54 263001_at AT1G54360 TAF6B, TBP-ASSOCIATED FACTOR 6B, TAF6B1, TBP-ASSOCIATED FACTOR 6B1, TAF6B2, TBP-ASSOCIATED FACTOR 6B2, TAF6B4, TBP-associated factor 6B4 -0.840 -0.017
55 263009_at AT1G54370 ATNHX5, NA+/H+ ANTIPORTER 5, NHX5, sodium hydrogen exchanger 5 -0.786 0.009
56 252629_at AT3G44970 [Cytochrome P450 superfamily protein] -0.434 -0.017
57 246200_at AT4G37240 unknown -0.304 0.052
58 249837_at AT5G23480 [SWIB/MDM2 domain] -0.276 0.066
59 258075_at AT3G25900 ATHMT-1, HMT-1 -0.256 0.025
60 257798_at AT3G15950 NAI2 -0.253 -0.022
61 247878_at AT5G57760 unknown -0.233 0.042
62 250528_at AT5G08600 [U3 ribonucleoprotein (Utp) family protein] -0.228 0.000
63 252081_at AT3G51910 AT-HSFA7A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, HSFA7A, heat shock transcription factor A7A -0.216 -0.019
64 262730_at AT1G16390 ATOCT3, organic cation/carnitine transporter 3, OCT3, organic cation/carnitine transporter 3 -0.215 0.010
65 260634_at AT1G62410 [MIF4G domain-containing protein] -0.214 0.012
66 246995_at AT5G67470 ATFH6, ARABIDOPSIS FORMIN HOMOLOG 6, FH6, formin homolog 6 -0.206 -0.050
67 261907_at AT1G65060 4CL3, 4-coumarate:CoA ligase 3 -0.205 0.073
68 254572_at AT4G19380 [Long-chain fatty alcohol dehydrogenase family protein] -0.198 -0.012
69 255481_at AT4G02460 AtPMS1, PMS1, POSTMEIOTIC SEGREGATION 1 -0.193 0.017
70 264901_at AT1G23090 AST91, sulfate transporter 91, SULTR3;3 -0.186 0.002
71 266464_at AT2G47800 ABCC4, ATP-binding cassette C4, ATMRP4, multidrug resistance-associated protein 4, EST3, MRP4, multidrug resistance-associated protein 4 -0.179 -0.028
72 261866_at AT1G50420 SCL-3, SCARECROW-LIKE 3, SCL3, scarecrow-like 3 -0.173 -0.015
73 247674_at AT5G59930 [Cysteine/Histidine-rich C1 domain family protein] -0.168 -0.028
74 254197_at AT4G24040 ATTRE1, TRE1, trehalase 1 -0.167 -0.048
75 249750_at AT5G24570 unknown -0.162 0.001
76 256787_at AT3G13790 ATBFRUCT1, ATCWINV1, ARABIDOPSIS THALIANA CELL WALL INVERTASE 1 -0.161 0.003
77 255732_at AT1G25450 CER60, ECERIFERUM 60, KCS5, 3-ketoacyl-CoA synthase 5 -0.161 -0.027
78 252193_at AT3G50060 MYB77, myb domain protein 77 -0.160 0.079
79 257364_at AT2G45940 unknown -0.159 0.072
80 263133_at AT1G78450 [SOUL heme-binding family protein] -0.159 0.012
81 260856_at AT1G21910 DREB26, dehydration response element-binding protein 26 -0.157 0.048
82 262351_at AT1G72990 BGAL17, beta-galactosidase 17 -0.157 0.007
83 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.157 0.046
84 252820_at AT3G42640 AHA8, H(+)-ATPase 8, HA8, H(+)-ATPase 8 -0.149 -0.002
85 260820_at AT1G06840 [Leucine-rich repeat protein kinase family protein] -0.147 -0.002
86 267382_at AT2G44300 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.146 0.008
87 250794_at AT5G05270 AtCHIL, CHIL, chalcone isomerase like -0.145 0.022
88 247057_at AT5G66770 [GRAS family transcription factor] -0.145 -0.150
89 258931_at AT3G10010 DML2, demeter-like 2 -0.144 -0.011
90 260578_at AT2G47350 [HIT zinc finger ] -0.144 0.040
91 249063_at AT5G44110 ABCI21, ATP-binding cassette A21, ATNAP2, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN, ATPOP1, POP1 -0.143 0.036
92 245449_at AT4G16870 [copia-like retrotransposon family, has a 0. P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] -0.138 -0.025
93 249709_at AT5G35670 iqd33, IQ-domain 33 -0.137 0.023
94 261768_at AT1G15550 ATGA3OX1, ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1, GA3OX1, gibberellin 3-oxidase 1, GA4, GA REQUIRING 4 -0.137 0.032
95 260522_x_at AT2G41730 unknown -0.137 0.033
96 251292_at AT3G61920 unknown -0.130 0.048
97 252916_at AT4G38950 [ATP binding microtubule motor family protein] -0.130 -0.019
98 259122_at AT3G02210 COBL1, COBRA-like protein 1 precursor -0.129 0.010
99 260593_at AT1G55870 AHG2, ABA-HYPERSENSITIVE GERMINATION 2, ATPARN, ARABIDOPSIS THALIANA POLY(A) RIBONUCLEASE -0.129 0.041
100 266301_at AT2G26960 AtMYB81, myb domain protein 81, MYB81, myb domain protein 81 -0.129 0.084
101 245109_at AT2G41520 DJC62, DNA J protein C62, TPR15, tetratricopeptide repeat 15 -0.128 -0.052
102 248247_at AT5G53210 SPCH, SPEECHLESS -0.127 -0.082
103 252123_at AT3G51240 F3'H, F3H, flavanone 3-hydroxylase, TT6, TRANSPARENT TESTA 6 -0.125 0.055
104 256600_at AT3G14850 TBL41, TRICHOME BIREFRINGENCE-LIKE 41 -0.125 0.023