4.0:Information of module
harboring empty vector+CHX
In comparison with Col0-PsmES4326-24hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0045893 positive regulation of transcription, DN... BP 6.099e-03
GO:0051254 positive regulation of RNA metabolic pro... BP 6.099e-03
GO:1902680 positive regulation of RNA biosynthetic ... BP 6.099e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010106 cellular response to iron ion starvation BP 3.199e-08
GO:0006826 iron ion transport BP 8.965e-08
GO:0000041 transition metal ion transport BP 2.535e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
harboring empty vector+CHX		 Log2 signal ratio
Col0-PsmES4326-24hpi
1 261429_at AT1G18860 ATWRKY61, WRKY DNA-BINDING PROTEIN 61, WRKY61, WRKY DNA-binding protein 61 0.133 0.785
2 265279_at AT2G28460 [Cysteine/Histidine-rich C1 domain family protein] 0.128 -0.102
3 264091_at AT1G79110 BRG2, BOI-related gene 2 0.108 -0.006
4 267128_at AT2G23620 ATMES1, ARABIDOPSIS THALIANA METHYL ESTERASE 1, MES1, methyl esterase 1 0.103 0.104
5 253411_at AT4G32980 ATH1, homeobox gene 1 0.101 -0.228
6 260344_at AT1G69240 ATMES15, ARABIDOPSIS THALIANA METHYL ESTERASE 15, MES15, methyl esterase 15, RHS9, ROOT HAIR SPECIFIC 9 0.092 0.080
7 261780_at AT1G76310 CYCB2;4, CYCLIN B2;4 0.074 0.004
8 266776_at AT2G29070 [Ubiquitin fusion degradation UFD1 family protein] 0.073 0.569
9 252751_at AT3G43430 [RING/U-box superfamily protein] 0.068 -0.006
10 261280_at AT1G05860 unknown 0.068 -0.041
11 255823_at AT2G40470 ASL11, ASYMMETRIC LEAVES2-LIKE 11, LBD15, LOB domain-containing protein 15 0.068 0.225
12 252758_at AT3G42710 [pseudogene] 0.066 0.089
13 265586_at AT2G19990 PR-1-LIKE, pathogenesis-related protein-1-like 0.065 0.196
14 249882_at AT5G22890 STOP2, sensitive to proton rhizotoxicity 2 0.062 0.082
15 253499_at AT4G31900 CHR7, chromatin remodeling 7, PKR2, PICKLE RELATED 2 0.061 0.004
16 265871_at AT2G01680 [Ankyrin repeat family protein] 0.061 0.162
17 251699_at AT3G56630 CYP94D2, cytochrome P450, family 94, subfamily D, polypeptide 2 0.061 0.096
18 251427_at AT3G60130 BGLU16, beta glucosidase 16 0.058 0.540
19 249986_at AT5G18460 unknown 0.057 -0.403
20 263544_at AT2G21590 APL4 0.056 -0.002
21 246014_at AT5G10680 [calmodulin-binding protein-related] 0.055 0.073
22 263814_at AT2G10010 [CACTA-like transposase family (Tnp2/En/Spm), has a 0. P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative] 0.052 0.002
23 248237_at AT5G53890 AtPSKR2, PSKR2, phytosylfokine-alpha receptor 2 0.050 0.029
24 253712_at AT4G29330 DER1, DERLIN-1 0.049 0.179
25 259031_at AT3G09360 [Cyclin/Brf1-like TBP-binding protein] 0.046 0.137
26 252829_at AT4G40060 ATHB-16, ATHB16, homeobox protein 16, HB16, homeobox protein 16 0.046 -0.299
27 255938_at AT1G12620 [Pentatricopeptide repeat (PPR) superfamily protein] 0.045 -0.060
28 255326_at AT4G04300 [pseudogene] 0.044 0.103
29 266575_at AT2G24060 [Translation initiation factor 3 protein] 0.043 -0.782
30 247191_at AT5G65310 ATHB-5, ATHB5, homeobox protein 5, HB5, homeobox protein 5 0.042 -0.640
31 255591_at AT4G01630 ATEXP17, EXPANSIN 17, ATEXPA17, expansin A17, ATHEXP ALPHA 1.13, EXPA17, expansin A17 -1.228 -0.048
32 248727_at AT5G47990 CYP705A5, cytochrome P450, family 705, subfamily A, polypeptide 5, THAD, THALIAN-DIOL DESATURASE, THAD1, THALIAN-DIOL DESATURASE -0.718 0.121
33 259590_at AT1G28160 [Integrase-type DNA-binding superfamily protein] -0.705 0.075
34 258145_at AT3G18200 UMAMIT4, Usually multiple acids move in and out Transporters 4 -0.688 0.034
35 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.611 0.141
36 245234_at AT4G25560 AtMYB18, myb domain protein 18, LAF1, LONG AFTER FAR-RED LIGHT 1, MYB18, myb domain protein 18 -0.594 0.012
37 264598_at AT1G04610 YUC3, YUCCA 3 -0.575 0.013
38 262981_at AT1G75590 SAUR52, SMALL AUXIN UPREGULATED RNA 52 -0.550 0.163
39 245113_at AT2G41660 MIZ1, mizu-kussei 1 -0.547 0.031
40 260607_at AT2G43700 LecRK-V.4, L-type lectin receptor kinase V.4 -0.545 0.103
41 256154_at AT3G08490 unknown -0.486 -0.044
42 245737_at AT1G44160 [HSP40/DnaJ peptide-binding protein] -0.467 -0.024
43 259576_at AT1G35330 [RING/U-box superfamily protein] -0.458 0.159
44 258901_at AT3G05640 [Protein phosphatase 2C family protein] -0.444 0.159
45 258874_at AT3G03230 [alpha/beta-Hydrolases superfamily protein] -0.439 0.072
46 246844_at AT5G26660 ATMYB86, myb domain protein 86, MYB86, myb domain protein 86 -0.433 0.729
47 254692_at AT4G17860 unknown -0.425 -0.018
48 264425_at AT1G61750 [Receptor-like protein kinase-related family protein] -0.403 0.035
49 250231_at AT5G13910 LEP, LEAFY PETIOLE -0.386 -0.009
50 260039_at AT1G68795 CLE12, CLAVATA3/ESR-RELATED 12 -0.385 0.215
51 258196_at AT3G13980 unknown -0.384 -0.391
52 256847_at AT3G27950 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.383 0.080
53 256788_at AT3G13730 CYP90D1, cytochrome P450, family 90, subfamily D, polypeptide 1 -0.375 0.376
54 250173_at AT5G14340 AtMYB40, myb domain protein 40, MYB40, myb domain protein 40 -0.374 0.072
55 248395_at AT5G52120 AtPP2-A14, phloem protein 2-A14, PP2-A14, phloem protein 2-A14 -0.371 0.171
56 253527_at AT4G31470 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.368 0.171
57 265856_at AT2G42430 ASL18, ASYMMETRIC LEAVES2-LIKE 18, LBD16, lateral organ boundaries-domain 16 -0.368 0.113
58 266824_at AT2G22800 HAT9 -0.368 0.277
59 259596_at AT1G28130 GH3.17 -0.363 0.488