4.0:Information of module
nas4x leaves - Fe
In comparison with Ambient CO2 leaf primordia help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006996 organelle organization BP 3.781e-16
GO:0043933 macromolecular complex subunit organizat... BP 4.172e-16
GO:0006261 DNA-dependent DNA replication BP 4.472e-15
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010212 response to ionizing radiation BP 2.255e-06
GO:0010332 response to gamma radiation BP 3.266e-06
GO:0006259 DNA metabolic process BP 6.268e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
nas4x leaves - Fe		 Log2 signal ratio
Ambient CO2 leaf primordia
1 258675_at AT3G08770 LTP6, lipid transfer protein 6 0.492 1.593
2 255513_at AT4G02060 MCM7, PRL, PROLIFERA 0.448 1.591
3 264319_at AT1G04110 AtSDD1, SDD1, STOMATAL DENSITY AND DISTRIBUTION 1 0.430 -0.463
4 258419_at AT3G16670 [Pollen Ole e 1 allergen and extensin family protein] 0.401 0.320
5 254609_at AT4G18970 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.330 0.080
6 266297_at AT2G29570 ATPCNA2, A. THALIANA PROLIFERATING CELL NUCLEAR ANTIGEN 2, PCNA2, proliferating cell nuclear antigen 2 0.317 0.519
7 267555_at AT2G32765 ATSUMO5, SUM5, SUMO 5, SUMO5, small ubiquitinrelated modifier 5 0.309 0.805
8 262376_at AT1G72970 EDA17, embryo sac development arrest 17, HTH, HOTHEAD 0.303 0.893
9 250661_at AT5G07030 [Eukaryotic aspartyl protease family protein] 0.297 0.346
10 245426_at AT4G17540 unknown 0.297 0.208
11 249276_at AT5G41880 POLA3, POLA4 0.289 0.477
12 264262_at AT1G09200 H3.1, histone 3.1 0.281 0.770
13 264386_at AT1G12000 [Phosphofructokinase family protein] 0.268 1.284
14 249718_at AT5G35740 [Carbohydrate-binding X8 domain superfamily protein] 0.266 1.079
15 260192_at AT1G67630 EMB2814, EMBRYO DEFECTIVE 2814, POLA2, DNA polymerase alpha 2 0.266 -0.194
16 259763_at AT1G77630 LYM3, lysin-motif (LysM) domain protein 3, LYP3, LysM-containing receptor protein 3 0.263 -0.055
17 250434_at AT5G10390 H3.1, histone 3.1 0.257 0.325
18 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] 0.256 -0.327
19 251142_at AT5G01015 unknown 0.252 0.953
20 253729_at AT4G29360 [O-Glycosyl hydrolases family 17 protein] 0.251 -0.268
21 265383_at AT2G16780 MSI02, MSI2, MULTICOPY SUPPRESSOR OF IRA1 2, NFC02, NFC2, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2 0.246 1.274
22 249469_at AT5G39320 UDG4, UDP-glucose dehydrogenase 4 0.244 1.011
23 264969_at AT1G67320 EMB2813, EMBRYO DEFECTIVE 2813 0.241 0.379
24 248074_at AT5G55730 FLA1, FASCICLIN-like arabinogalactan 1 0.239 0.224
25 265695_at AT2G24490 ATRPA2, ATRPA32A, ROR1, SUPPRESSOR OF ROS1, RPA2, replicon protein A2, RPA32A 0.237 1.562
26 253397_at AT4G32710 PERK14, proline-rich extensin-like receptor kinase 14 0.235 -0.349
27 248632_at AT5G49010 EMB2812, EMBRYO DEFECTIVE 2812, SLD5, SYNTHETIC LETHALITY WITH DPB11-1 5 0.233 0.930
28 251972_at AT3G53170 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.228 -0.425
29 247250_at AT5G64630 FAS2, FASCIATA 2, MUB3.9, NFB01, NFB1 0.223 -0.136
30 265893_at AT2G15042 [Leucine-rich repeat (LRR) family protein] 0.221 -0.368
31 245980_at AT5G13140 [Pollen Ole e 1 allergen and extensin family protein] 0.216 1.253
32 253877_at AT4G27435 unknown 0.212 0.176
33 256673_at AT3G52370 FLA15, FASCICLIN-like arabinogalactan protein 15 precursor 0.212 0.465
34 248924_at AT5G45960 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.211 -0.436
35 255860_at AT5G34940 AtGUS3, glucuronidase 3, GUS3, glucuronidase 3 0.209 0.597
36 264377_at AT2G25060 AtENODL14, ENODL14, early nodulin-like protein 14 0.204 0.549
37 267173_at AT2G37560 ATORC2, ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2, ORC2, origin recognition complex second largest subunit 2 0.203 0.042
38 251714_at AT3G56370 [Leucine-rich repeat protein kinase family protein] 0.201 -0.115
39 265097_at AT1G04020 ATBARD1, BARD1, breast cancer associated RING 1, ROW1 0.200 0.639
40 251920_at AT3G53900 PYRR, PYRIMIDINE R, UPP, uracil phosphoribosyltransferase 0.196 1.085
41 252878_at AT4G39460 SAMC1, S-adenosylmethionine carrier 1, SAMT1, SAM TRANSPORTER1 0.195 0.970
42 261688_at AT1G47380 [Protein phosphatase 2C family protein] 0.194 -0.785
43 259637_at AT1G52260 ATPDI3, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 3, ATPDIL1-5, PDI-like 1-5, PDI3, PROTEIN DISULFIDE ISOMERASE 3, PDIL1-5, PDI-like 1-5 0.194 -0.676
44 245479_at AT4G16140 [proline-rich family protein] 0.192 0.599
45 265960_at AT2G37470 [Histone superfamily protein] 0.191 0.708
46 250832_at AT5G04950 ATNAS1, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 1, NAS1, nicotianamine synthase 1 -1.101 -0.385
47 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.716 -0.526
48 263401_at AT2G04070 [MATE efflux family protein] -0.647 -0.959
49 267529_at AT2G45490 AtAUR3, ataurora3, AUR3, ataurora3 -0.628 -0.028
50 254818_at AT4G12470 AZI1, azelaic acid induced 1 -0.580 -0.966
51 248086_at AT5G55490 ATGEX1, GAMETE EXPRESSED PROTEIN 1, GEX1, gamete expressed protein 1 -0.542 -0.819
52 251844_at AT3G54630 unknown -0.470 0.003
53 251035_at AT5G02220 SMR4, SIAMESE-RELATED 4 -0.451 0.371
54 255377_at AT4G03500 [Ankyrin repeat family protein] -0.426 -0.111
55 248236_at AT5G53870 AtENODL1, ENODL1, early nodulin-like protein 1 -0.425 -0.930
56 248668_at AT5G48720 XRI, X-RAY INDUCED TRANSCRIPT, XRI1, X-RAY INDUCED TRANSCRIPT 1 -0.424 0.423
57 250914_at AT5G03780 TRFL10, TRF-like 10 -0.397 -0.502
58 255511_at AT4G02075 PIT1, pitchoun 1 -0.362 0.452
59 261046_at AT1G01390 [UDP-Glycosyltransferase superfamily protein] -0.334 -1.155
60 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 -0.329 -0.789
61 261585_at AT1G01010 ANAC001, NAC domain containing protein 1, NAC001, NAC domain containing protein 1 -0.276 -0.327
62 258203_at AT3G13950 unknown -0.267 -0.516
63 264390_at AT1G11950 [Transcription factor jumonji (jmjC) domain-containing protein] -0.262 -0.122
64 259224_at AT3G07800 AtTK1a, TK1a, thymidine kinase 1a -0.254 0.109
65 265382_at AT2G16790 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.254 -0.180
66 254839_at AT4G12400 Hop3, Hop3 -0.250 -0.382
67 249532_at AT5G38780 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.246 -1.002
68 260196_at AT1G67570 unknown -0.246 0.640
69 254140_at AT4G24610 unknown -0.244 -0.330
70 256913_at AT3G23870 unknown -0.240 -1.251
71 257369_at AT2G35550 ATBPC7, BASIC PENTACYSTEINE 7, BBR, BPC7, basic pentacysteine 7 -0.237 -1.104
72 255341_at AT4G04500 CRK37, cysteine-rich RLK (RECEPTOR-like protein kinase) 37 -0.233 -1.161
73 266508_at AT2G47920 NET3C, Networked 3C -0.227 0.399
74 248495_at AT5G50780 [Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein] -0.225 -0.332
75 257020_at AT3G19590 BUB3.1, BUB (BUDDING UNINHIBITED BY BENZYMIDAZOL) 3.1 -0.220 0.250
76 246098_at AT5G20400 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.219 -0.621
77 253317_at AT4G33960 unknown -0.217 0.035
78 252736_at AT3G43210 ATNACK2, ARABIDOPSIS NPK1-ACTIVATING KINESIN 2, NACK2, NPK1-ACTIVATING KINESIN 2, TES, TETRASPORE -0.217 -0.681
79 258566_at AT3G04110 ATGLR1.1, GLR1, GLUTAMATE RECEPTOR 1, GLR1.1, glutamate receptor 1.1 -0.216 -0.700
80 256930_at AT3G22460 OASA2, O-acetylserine (thiol) lyase (OAS-TL) isoform A2 -0.215 0.284
81 253246_at AT4G34600 unknown -0.207 -0.074
82 258805_at AT3G04010 [O-Glycosyl hydrolases family 17 protein] -0.203 -0.685
83 249032_at AT5G44910 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.198 -0.561
84 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] -0.196 -0.671
85 262605_at AT1G15170 [MATE efflux family protein] -0.191 -0.881
86 247995_at AT5G56160 [Sec14p-like phosphatidylinositol transfer family protein] -0.185 0.334
87 248579_at AT5G49880 AtMAD1, MAD1, mitotic arrest deficient 1, NES1, NITRIC OXIDE-INDUCED EARLY COTYLEDON SENESCENCE 1 -0.181 0.194
88 249346_at AT5G40780 LHT1, lysine histidine transporter 1 -0.180 0.241
89 253819_at AT4G28350 LecRK-VII.2, L-type lectin receptor kinase VII.2 -0.180 -1.268