4.0:Information of module
ckh2 CK25
In comparison with WT (Ler) CK200 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 3.320e-37
GO:0019684 photosynthesis, light reaction BP 8.828e-34
GO:0042254 ribosome biogenesis BP 2.407e-33
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010817 regulation of hormone levels BP 8.723e-04
GO:0019375 galactolipid biosynthetic process BP 1.144e-03
GO:0019374 galactolipid metabolic process BP 1.292e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ckh2 CK25		 Log2 signal ratio
WT (Ler) CK200
1 260584_at AT2G43660 [Carbohydrate-binding X8 domain superfamily protein] 0.818 0.043
2 257768_at AT3G23060 [RING/U-box superfamily protein] 0.810 0.060
3 258923_at AT3G10450 SCPL7, serine carboxypeptidase-like 7 0.669 0.052
4 267645_at AT2G32860 BGLU33, beta glucosidase 33 0.540 0.458
5 248684_at AT5G48485 DIR1, DEFECTIVE IN INDUCED RESISTANCE 1 0.531 0.978
6 255457_at AT4G02770 PSAD-1, photosystem I subunit D-1 0.519 0.083
7 265481_at AT2G15960 unknown 0.467 0.259
8 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.466 0.079
9 253871_at AT4G27440 PORB, protochlorophyllide oxidoreductase B 0.419 0.080
10 253738_at AT4G28750 PSAE-1, PSA E1 KNOCKOUT 0.416 0.193
11 262283_at AT1G68590 PSRP3/1, plastid-specific ribosomal protein 3/1 0.410 0.327
12 247358_at AT5G63580 ATFLS2, FLS2, flavonol synthase 2 0.410 0.062
13 250731_at AT5G06500 AGL96, AGAMOUS-like 96 0.386 0.015
14 251519_at AT3G59400 GUN4, GENOMES UNCOUPLED 4 0.384 0.108
15 256979_at AT3G21055 PSBTN, photosystem II subunit T 0.378 0.223
16 254333_at AT4G22753 ATSMO1-3, SMO1-3, sterol 4-alpha methyl oxidase 1-3 0.374 0.573
17 248151_at AT5G54270 LHCB3, light-harvesting chlorophyll B-binding protein 3, LHCB3*1 0.361 0.217
18 264545_at AT1G55670 PSAG, photosystem I subunit G 0.354 0.293
19 247228_at AT5G65140 TPPJ, trehalose-6-phosphate phosphatase J 0.348 -0.002
20 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] 0.319 0.057
21 258285_at AT3G16140 PSAH-1, photosystem I subunit H-1 0.315 0.206
22 263761_at AT2G21330 AtFBA1, FBA1, fructose-bisphosphate aldolase 1 0.307 0.115
23 248301_at AT5G53150 [DNAJ heat shock N-terminal domain-containing protein] 0.304 0.026
24 260427_at AT1G72430 SAUR78, SMALL AUXIN UPREGULATED RNA 78 0.293 0.170
25 245347_at AT4G14890 FdC1, ferredoxin C 1 0.284 0.215
26 254970_at AT4G10340 LHCB5, light harvesting complex of photosystem II 5 0.284 0.191
27 251082_at AT5G01530 LHCB4.1, light harvesting complex photosystem II 0.282 0.117
28 267003_at AT2G34340 unknown 0.277 -0.019
29 255720_at AT1G32060 PRK, phosphoribulokinase 0.275 0.076
30 264092_at AT1G79040 PSBR, photosystem II subunit R 0.267 0.093
31 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] -0.923 0.194
32 263098_at AT2G16005 [MD-2-related lipid recognition domain-containing protein] -0.782 0.035
33 260097_at AT1G73220 AtOCT1, organic cation/carnitine transporter1, OCT1, organic cation/carnitine transporter1 -0.781 0.806
34 265305_at AT2G20340 AAS, aromatic aldehyde synthase, AtAAS -0.763 0.246
35 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.643 -0.143
36 249567_at AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.635 0.196
37 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.592 0.001
38 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.555 0.210
39 249813_at AT5G23940 DCR, DEFECTIVE IN CUTICULAR RIDGES, EMB3009, EMBRYO DEFECTIVE 3009, PEL3, PERMEABLE LEAVES3 -0.517 -0.189
40 253697_at AT4G29700 [Alkaline-phosphatase-like family protein] -0.505 -0.224
41 256053_at AT1G07260 UGT71C3, UDP-glucosyl transferase 71C3 -0.492 -0.178
42 266866_at AT2G29940 ABCG31, ATP-binding cassette G31, ATPDR3, PLEIOTROPIC DRUG RESISTANCE 3, PDR3, pleiotropic drug resistance 3 -0.474 -0.119
43 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 -0.469 -0.196
44 267307_at AT2G30210 LAC3, laccase 3 -0.459 -0.607
45 247640_at AT5G60610 [F-box/RNI-like superfamily protein] -0.458 -0.087
46 255111_at AT4G08780 [Peroxidase superfamily protein] -0.454 -0.363
47 263482_at AT2G03980 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.415 -0.144
48 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] -0.415 0.379
49 260547_at AT2G43550 [Scorpion toxin-like knottin superfamily protein] -0.402 0.461
50 259002_at AT3G02000 ROXY1 -0.378 -0.221
51 265924_at AT2G18620 [Terpenoid synthases superfamily protein] -0.366 -0.176
52 261425_at AT1G18880 AtNPF2.9, NPF2.9, NRT1/ PTR family 2.9, NRT1.9, nitrate transporter 1.9 -0.352 -0.084
53 257313_at AT3G26520 GAMMA-TIP2, SITIP, SALT-STRESS INDUCIBLE TONOPLAST INTRINSIC PROTEIN, TIP1;2, TIP2, tonoplast intrinsic protein 2 -0.327 0.128
54 259548_at AT1G35260 MLP165, MLP-like protein 165 -0.308 -0.094
55 262478_at AT1G11170 unknown -0.305 -0.182
56 253017_at AT4G37970 ATCAD6, CAD6, cinnamyl alcohol dehydrogenase 6 -0.305 0.257
57 266549_at AT2G35150 EXL7, EXORDIUM LIKE 7 -0.300 0.466
58 253101_at AT4G37430 CYP81F1, CYTOCHROME P450 MONOOXYGENASE 81F1, CYP91A2, cytochrome P450, family 91, subfamily A, polypeptide 2 -0.287 -0.056
59 259671_at AT1G52290 AtPERK15, proline-rich extensin-like receptor kinase 15, PERK15, proline-rich extensin-like receptor kinase 15 -0.280 -0.014