4.0:Information of module
M6PR transgenic 100mM NaCl
In comparison with root epidermis and lateral root cap pH4.6 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 2.370e-19
GO:0010200 response to chitin BP 1.184e-17
GO:0010243 response to organonitrogen compound BP 3.835e-17
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042991 transcription factor import into nucleus BP 5.344e-03
GO:0045491 xylan metabolic process BP 8.745e-03
GO:0009404 toxin metabolic process BP 1.115e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
M6PR transgenic 100mM NaCl		 Log2 signal ratio
root epidermis and lateral root cap pH4.6
1 256527_at AT1G66100 [Plant thionin] 1.538 -0.002
2 252462_at AT3G47250 unknown 1.443 0.029
3 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 1.241 -0.198
4 245448_at AT4G16860 RPP4, recognition of peronospora parasitica 4 1.219 -0.035
5 256497_at AT1G31580 CXC750, ECS1 1.210 -0.064
6 260312_at AT1G63880 [Disease resistance protein (TIR-NBS-LRR class) family] 1.110 0.051
7 245729_at AT1G73490 [RNA-binding (RRM/RBD/RNP motifs) family protein] 1.086 0.054
8 252648_at AT3G44630 [Disease resistance protein (TIR-NBS-LRR class) family] 1.062 0.040
9 259629_at AT1G56510 ADR2, ACTIVATED DISEASE RESISTANCE 2, WRR4, WHITE RUST RESISTANCE 4 1.040 -0.022
10 256617_at AT3G22240 unknown 0.985 0.067
11 263023_at AT1G23960 unknown 0.955 -0.002
12 252703_at AT3G43740 [Leucine-rich repeat (LRR) family protein] 0.944 0.032
13 245504_at AT4G15660 [Thioredoxin superfamily protein] 0.892 0.020
14 254585_at AT4G19500 [nucleoside-triphosphatases] 0.878 0.019
15 255484_at AT4G02540 [Cysteine/Histidine-rich C1 domain family protein] 0.877 -0.034
16 262010_at AT1G35612 [expressed protein] 0.851 -0.092
17 261339_at AT1G35710 [Protein kinase family protein with leucine-rich repeat domain] 0.849 0.034
18 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 0.848 -0.074
19 245449_at AT4G16870 [copia-like retrotransposon family, has a 0. P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] 0.831 -0.058
20 250063_at AT5G17880 CSA1, constitutive shade-avoidance1 0.812 0.120
21 249242_at AT5G42250 [Zinc-binding alcohol dehydrogenase family protein] 0.809 0.023
22 252170_at AT3G50480 HR4, homolog of RPW8 4 0.791 0.066
23 262458_at AT1G11280 [S-locus lectin protein kinase family protein] 0.768 0.045
24 249639_at AT5G36930 [Disease resistance protein (TIR-NBS-LRR class) family] 0.759 0.085
25 252560_at AT3G46030 HTB11 0.728 -0.047
26 245451_at AT4G16890 BAL, BALL, SNC1, SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1 0.699 -0.045
27 256221_at AT1G56300 [Chaperone DnaJ-domain superfamily protein] 0.647 -0.086
28 259529_at AT1G12400 [Nucleotide excision repair, TFIIH, subunit TTDA] 0.558 0.069
29 254553_at AT4G19530 [disease resistance protein (TIR-NBS-LRR class) family] 0.547 -0.023
30 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.544 0.131
31 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A 0.527 0.185
32 247988_at AT5G56910 [Proteinase inhibitor I25, cystatin, conserved region] 0.522 -0.037
33 250755_at AT5G05750 [DNAJ heat shock N-terminal domain-containing protein] 0.518 -0.046
34 260411_at AT1G69890 unknown 0.509 0.086
35 248016_at AT5G56380 [F-box/RNI-like/FBD-like domains-containing protein] 0.509 0.061
36 247742_at AT5G58980 [Neutral/alkaline non-lysosomal ceramidase] 0.498 -0.026
37 249124_at AT5G43740 [Disease resistance protein (CC-NBS-LRR class) family] 0.496 -0.047
38 254870_at AT4G11900 [S-locus lectin protein kinase family protein] 0.495 -0.078
39 252444_at AT3G46980 PHT4;3, phosphate transporter 4;3 0.489 -0.041
40 264166_at AT1G65370 [TRAF-like family protein] 0.488 0.027
41 264482_at AT1G77210 AtSTP14, sugar transport protein 14, STP14, sugar transport protein 14 0.487 -0.013
42 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA 0.484 -0.022
43 252539_at AT3G45730 unknown 0.482 -0.040
44 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.471 -0.119
45 257008_at AT3G14210 ESM1, epithiospecifier modifier 1 0.463 0.017
46 254085_at AT4G24960 ATHVA22D, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE D, HVA22D, HVA22 homologue D -0.796 0.030
47 246552_at AT5G15420 unknown -0.749 -0.035
48 262421_at AT1G50290 unknown -0.738 -0.183
49 250135_at AT5G15360 unknown -0.736 -0.085
50 254574_at AT4G19430 unknown -0.711 0.065
51 254566_at AT4G19240 unknown -0.664 -0.018
52 259385_at AT1G13470 unknown -0.653 -0.051
53 254234_at AT4G23680 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.600 -0.147
54 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 -0.556 0.028
55 256976_at AT3G21020 [copia-like retrotransposon family, has a 5.4e-14 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] -0.552 -0.022
56 264513_at AT1G09420 G6PD4, glucose-6-phosphate dehydrogenase 4 -0.528 0.016
57 246855_at AT5G26280 [TRAF-like family protein] -0.509 -0.023
58 266912_at AT2G45900 TRM13, TON1 Recruiting Motif 13 -0.500 -0.013
59 253254_at AT4G34650 SQS2, squalene synthase 2 -0.499 -0.073
60 266372_at AT2G41310 ARR8, RESPONSE REGULATOR 8, ATRR3, response regulator 3, RR3, response regulator 3 -0.497 -0.088
61 263178_at AT1G05550 unknown -0.447 -0.020
62 263174_at AT1G54040 ESP, epithiospecifier protein, ESR, EPITHIOSPECIFYING SENESCENCE REGULATOR, TASTY -0.435 -0.143
63 246733_at AT5G27660 DEG14, degradation of periplasmic proteins 14 -0.396 0.015
64 264887_at AT1G23120 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.358 -0.050
65 261001_at AT1G26530 [PIN domain-like family protein] -0.354 0.004
66 249843_at AT5G23570 ATSGS3, SUPPRESSOR OF GENE SILENCING 3, SGS3, SUPPRESSOR OF GENE SILENCING 3 -0.353 0.126
67 259308_at AT3G05180 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.327 -0.051
68 246193_at AT5G20880 [retrotransposon family] -0.325 -0.051
69 248286_at AT5G52870 MAKR5, MEMBRANE-ASSOCIATED KINASE REGULATOR 5 -0.318 -0.013
70 263544_at AT2G21590 APL4 -0.318 -0.026
71 262553_at AT1G31360 ATRECQ2, ARABIDOPSIS THALIANA RECQ 2, MED34, RECQL2, RECQ helicase L2 -0.294 0.019
72 266355_at AT2G01400 unknown -0.290 -0.021
73 249330_at AT5G40970 unknown -0.284 0.021
74 262143_at AT1G52630 [O-fucosyltransferase family protein] -0.274 0.021
75 257509_at AT1G63190 [Cystatin/monellin superfamily protein] -0.265 -0.032
76 250758_at AT5G06000 ATEIF3G2, ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITIATION FACTOR 3G2, EIF3G2, eukaryotic translation initiation factor 3G2 -0.262 0.041
77 255150_at AT4G08160 [glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein] -0.259 -0.033
78 260170_at AT1G71890 ATSUC5, SUCROSE-PROTON SYMPORTER 5, SUC5 -0.250 -0.056
79 263852_at AT2G04450 ATNUDT6, nudix hydrolase homolog 6, ATNUDX6, Arabidopsis thaliana nucleoside diphosphate linked to some moiety X 6, NUDT6, nudix hydrolase homolog 6, NUDX6, nucleoside diphosphates linked to some moiety X 6 -0.232 -0.008
80 250049_at AT5G17780 [alpha/beta-Hydrolases superfamily protein] -0.230 0.070
81 247168_at AT5G65860 [ankyrin repeat family protein] -0.223 0.093
82 264292_at AT1G78790 unknown -0.223 0.001
83 264331_at AT1G04130 AtTPR2, TPR2, tetratricopeptide repeat 2 -0.222 0.118
84 261387_at AT1G05410 unknown -0.217 0.272
85 254805_at AT4G12480 EARLI1, EARLY ARABIDOPSIS ALUMINUM INDUCED 1, pEARLI 1 -0.217 -0.000
86 248646_at AT5G49100 unknown -0.213 -0.011
87 253411_at AT4G32980 ATH1, homeobox gene 1 -0.208 -0.002
88 261112_at AT1G75420 [UDP-Glycosyltransferase superfamily protein] -0.203 0.030
89 261242_at AT1G32960 ATSBT3.3, SBT3.3 -0.202 -0.009