4.0:Information of module
JA 3h
In comparison with atmospheric CO2 high Mg shoot help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009695 jasmonic acid biosynthetic process BP 2.538e-08
GO:0009611 response to wounding BP 2.897e-08
GO:0009867 jasmonic acid mediated signaling pathway BP 3.496e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048827 phyllome development BP 4.212e-03
GO:0015995 chlorophyll biosynthetic process BP 9.854e-03
GO:0048366 leaf development BP 1.064e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
JA 3h		 Log2 signal ratio
atmospheric CO2 high Mg shoot
1 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 1.596 3.998
2 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 1.591 4.354
3 264415_at AT1G43160 RAP2.6, related to AP2 6 1.344 4.509
4 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.310 3.992
5 262325_at AT1G64160 AtDIR5, DIR5, dirigent protein 5 1.252 0.084
6 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 1.230 3.001
7 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 1.152 2.383
8 250793_at AT5G05600 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.101 4.215
9 266419_at AT2G38760 ANN3, ANNEXIN 3, ANNAT3, annexin 3, AtANN3 1.087 3.388
10 262616_at AT1G06620 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.054 2.851
11 266142_at AT2G39030 NATA1, N-acetyltransferase activity 1 1.008 3.365
12 245209_at AT5G12340 unknown 0.912 1.004
13 259384_at AT3G16450 JAL33, Jacalin-related lectin 33 0.902 0.084
14 245244_at AT1G44350 ILL6, IAA-leucine resistant (ILR)-like gene 6 0.881 3.305
15 258941_at AT3G09940 ATMDAR3, ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3, MDAR2, MONODEHYDROASCORBATE REDUCTASE 2, MDAR3, MONODEHYDROASCORBATE REDUCTASE 3, MDHAR, monodehydroascorbate reductase 0.853 4.545
16 256159_at AT1G30135 JAZ8, jasmonate-zim-domain protein 8, TIFY5A 0.761 2.891
17 266246_at AT2G27690 CYP94C1, cytochrome P450, family 94, subfamily C, polypeptide 1 0.737 3.461
18 247175_at AT5G65280 GCL1, GCR2-like 1 0.672 2.646
19 256725_at AT2G34070 TBL37, TRICHOME BIREFRINGENCE-LIKE 37 0.662 0.133
20 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A 0.650 2.567
21 266270_at AT2G29470 ATGSTU3, glutathione S-transferase tau 3, GST21, GLUTATHIONE S-TRANSFERASE 21, GSTU3, glutathione S-transferase tau 3 0.643 0.084
22 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 0.625 3.458
23 257798_at AT3G15950 NAI2 0.557 1.808
24 266486_at AT2G47950 unknown 0.540 0.084
25 263137_at AT1G78660 ATGGH1, gamma-glutamyl hydrolase 1, GGH1, gamma-glutamyl hydrolase 1 0.537 0.140
26 262254_at AT1G53920 GLIP5, GDSL-motif lipase 5 0.512 1.069
27 250252_at AT5G13750 ZIFL1, zinc induced facilitator-like 1 0.485 0.050
28 254064_at AT4G25410 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.482 -0.831
29 266456_at AT2G22770 NAI1 0.445 2.321
30 263032_at AT1G23850 unknown 0.427 0.576
31 262171_at AT1G74950 JAZ2, JASMONATE-ZIM-DOMAIN PROTEIN 2, TIFY10B 0.424 2.927
32 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.653 -2.098
33 254013_at AT4G26050 PIRL8, plant intracellular ras group-related LRR 8 -0.520 0.084
34 251491_at AT3G59480 [pfkB-like carbohydrate kinase family protein] -0.505 0.084
35 248931_at AT5G46040 [Major facilitator superfamily protein] -0.488 0.084
36 249097_at AT5G43520 [Cysteine/Histidine-rich C1 domain family protein] -0.413 0.084
37 250398_at AT5G11000 unknown -0.327 0.561
38 249010_at AT5G44580 unknown -0.322 -0.113
39 245196_at AT1G67750 [Pectate lyase family protein] -0.311 -1.019
40 254524_at AT4G20000 [VQ motif-containing protein] -0.287 2.410
41 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.280 0.091
42 254118_at AT4G24790 [AAA-type ATPase family protein] -0.259 -0.740
43 256516_at AT1G66150 TMK1, transmembrane kinase 1 -0.217 -0.068
44 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] -0.214 -0.841
45 252987_at AT4G38390 RHS17, root hair specific 17 -0.213 0.084
46 263194_at AT1G36060 [Integrase-type DNA-binding superfamily protein] -0.201 0.084
47 252836_at AT3G42070 unknown -0.200 0.084
48 265028_at AT1G24530 [Transducin/WD40 repeat-like superfamily protein] -0.197 1.364
49 261453_at AT1G21130 IGMT4, indole glucosinolate O-methyltransferase 4 -0.195 -0.145
50 252176_at AT3G50720 [Protein kinase superfamily protein] -0.179 0.084
51 249009_at AT5G44610 MAP18, microtubule-associated protein 18, PCAP2, PLASMA MEMBRANE ASSOCIATED CA2+-BINDING PROTEIN-2 -0.178 1.310
52 245616_at AT4G14480 [Protein kinase superfamily protein] -0.176 -1.025
53 267634_at AT2G42100 [Actin-like ATPase superfamily protein] -0.175 0.084
54 259769_at AT1G29400 AML5, MEI2-like protein 5, ML5, MEI2-like protein 5 -0.169 0.305
55 252175_at AT3G50700 AtIDD2, indeterminate(ID)-domain 2, IDD2, indeterminate(ID)-domain 2 -0.168 -0.299
56 251073_at AT5G01750 unknown -0.162 0.524
57 264181_at AT1G65350 UBQ13, ubiquitin 13 -0.160 0.084
58 253083_at AT4G36250 ALDH3F1, aldehyde dehydrogenase 3F1 -0.158 0.151
59 251797_at AT3G55560 AGF2, AT-hook protein of GA feedback 2, AHL15, AT-hook motif nuclear-localized protein 15 -0.158 2.547
60 245237_at AT4G25520 SLK1, SEUSS-like 1 -0.156 0.523
61 247466_at AT5G62090 SLK2, SEUSS-like 2 -0.144 0.155