4.0:Information of module
Whole root - S 48H
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010583 response to cyclopentenone BP 7.257e-13
GO:0014070 response to organic cyclic compound BP 2.598e-11
GO:0019748 secondary metabolic process BP 3.200e-11
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009814 defense response, incompatible interacti... BP 6.332e-06
GO:0006952 defense response BP 1.726e-05
GO:0042537 benzene-containing compound metabolic pr... BP 2.137e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Whole root - S 48H		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 267389_at AT2G44460 BGLU28, beta glucosidase 28 1.210 -0.045
2 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 1.187 -0.020
3 248676_at AT5G48850 ATSDI1, SULPHUR DEFICIENCY-INDUCED 1 1.110 0.037
4 246884_at AT5G26220 AtGGCT2;1, GGCT2;1, gamma-glutamyl cyclotransferase 2;1 1.043 0.040
5 258983_at AT3G08860 PYD4, PYRIMIDINE 4 0.708 -0.100
6 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.616 -0.052
7 256450_at AT1G75290 [NAD(P)-binding Rossmann-fold superfamily protein] 0.587 -0.005
8 246250_at AT4G36880 CP1, cysteine proteinase1, RDL1, RD21A-LIKE PROTEASE1 0.554 -0.095
9 264912_at AT1G60750 [NAD(P)-linked oxidoreductase superfamily protein] 0.511 -0.094
10 253525_at AT4G31330 unknown 0.444 -0.054
11 259975_at AT1G76470 [NAD(P)-binding Rossmann-fold superfamily protein] 0.408 0.157
12 256454_at AT1G75280 [NmrA-like negative transcriptional regulator family protein] 0.399 -0.110
13 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.387 0.040
14 261475_at AT1G14550 [Peroxidase superfamily protein] 0.387 -0.051
15 253774_at AT4G28530 anac074, NAC domain containing protein 74, NAC074, NAC domain containing protein 74 0.380 0.008
16 256244_at AT3G12520 SULTR4;2, sulfate transporter 4;2 0.352 0.105
17 249494_at AT5G39050 PMAT1, phenolic glucoside malonyltransferase 1 0.328 -0.155
18 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.326 0.316
19 255284_at AT4G04610 APR, APR1, APS reductase 1, ATAPR1, PRH19, PAPS REDUCTASE HOMOLOG 19 0.308 0.084
20 257262_at AT3G21890 BBX31, B-box domain protein 31 0.303 -0.015
21 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.301 0.010
22 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 0.292 -0.104
23 256584_at AT3G28750 unknown 0.286 0.013
24 247061_at AT5G66780 unknown 0.285 -0.128
25 261428_at AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 0.283 0.053
26 260540_at AT2G43500 NLP8, NIN-like protein 8 0.281 -0.213
27 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 0.274 -0.064
28 258179_at AT3G21690 [MATE efflux family protein] 0.264 -0.121
29 253317_at AT4G33960 unknown 0.258 0.109
30 245855_at AT5G13550 SULTR4;1, sulfate transporter 4.1 0.255 0.126
31 261441_at AT1G28470 ANAC010, NAC domain containing protein 10, NAC010, NAC domain containing protein 10, SND3, SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 3 0.250 -0.111
32 264745_at AT1G62180 5'adenylylphosphosulfate reductase 2 0.235 0.086
33 246584_at AT5G14730 unknown 0.231 -0.078
34 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.230 0.028
35 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 0.230 -0.078
36 266820_at AT2G44940 [Integrase-type DNA-binding superfamily protein] 0.212 -0.126
37 261192_at AT1G32870 ANAC013, Arabidopsis NAC domain containing protein 13, ANAC13, NAC domain protein 13, NAC13, NAC domain protein 13 0.211 0.179
38 262525_at AT1G17060 CHI2, CHIBI 2, CYP72C1, cytochrome p450 72c1, SHK1, SHRINK 1, SOB7, SUPPRESSOR OF PHYB-4 7 0.208 -0.100
39 262244_at AT1G48260 CIPK17, CBL-interacting protein kinase 17, SnRK3.21, SNF1-RELATED PROTEIN KINASE 3.21 0.206 0.081
40 251856_at AT3G54720 AMP1, ALTERED MERISTEM PROGRAM 1, AtAMP1, COP2, CONSTITUTIVE MORPHOGENESIS 2, HPT, HAUPTLING, MFO1, Multifolia, PT, PRIMORDIA TIMING 0.205 0.041
41 245401_at AT4G17670 unknown 0.203 -0.128
42 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 0.203 0.056
43 256453_at AT1G75270 DHAR2, dehydroascorbate reductase 2 0.200 0.124
44 246537_at AT5G15940 [NAD(P)-binding Rossmann-fold superfamily protein] 0.199 0.107
45 267298_at AT2G23760 BLH4, BEL1-like homeodomain 4, SAW2, SAWTOOTH 2 0.197 -0.084
46 261618_at AT1G33110 [MATE efflux family protein] 0.194 0.046
47 263376_at AT2G20520 FLA6, FASCICLIN-like arabinogalactan 6 -0.641 0.112
48 261157_at AT1G34510 [Peroxidase superfamily protein] -0.632 -0.147
49 260495_at AT2G41810 unknown -0.586 -0.144
50 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 -0.584 0.039
51 254534_at AT4G19680 ATIRT2, IRON REGULATED TRANSPORTER 2, IRT2, iron regulated transporter 2 -0.545 0.005
52 265611_at AT2G25510 unknown -0.514 0.007
53 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 -0.510 0.018
54 249112_at AT5G43780 APS4 -0.382 -0.044
55 261006_at AT1G26410 [FAD-binding Berberine family protein] -0.362 -0.037
56 247710_at AT5G59260 LecRK-II.1, L-type lectin receptor kinase II.1 -0.337 0.065
57 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.337 -0.288
58 250007_at AT5G18670 BAM9, BETA-AMYLASE 9, BMY3, beta-amylase 3 -0.306 0.174
59 259076_at AT3G02140 AFP4, ABI FIVE BINDING PROTEIN 4, TMAC2, TWO OR MORE ABRES-CONTAINING GENE 2 -0.289 0.215
60 253763_at AT4G28850 ATXTH26, XTH26, xyloglucan endotransglucosylase/hydrolase 26 -0.285 0.112
61 249037_at AT5G44130 FLA13, FASCICLIN-like arabinogalactan protein 13 precursor -0.277 -0.123
62 252859_at AT4G39780 [Integrase-type DNA-binding superfamily protein] -0.276 0.005
63 255881_at AT1G67070 DIN9, DARK INDUCIBLE 9, PMI2, PHOSPHOMANNOSE ISOMERASE 2 -0.276 -0.079
64 248347_at AT5G52250 EFO1, EARLY FLOWERING BY OVEREXPRESSION 1, RUP1, REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 -0.275 -0.089
65 255516_at AT4G02270 RHS13, root hair specific 13 -0.275 -0.024
66 263467_at AT2G31730 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.274 -0.071
67 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 -0.274 0.043
68 257670_at AT3G20340 unknown -0.268 -0.153
69 245076_at AT2G23170 GH3.3 -0.250 0.091
70 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 -0.242 0.069
71 260284_at AT1G80380 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.241 -0.090
72 253908_at AT4G27260 GH3.5, WES1 -0.239 0.062
73 261989_at AT1G33670 [Leucine-rich repeat (LRR) family protein] -0.239 0.075
74 246114_at AT5G20250 DIN10, DARK INDUCIBLE 10, RS6, raffinose synthase 6 -0.238 -0.003
75 256352_at AT1G54970 ATPRP1, proline-rich protein 1, PRP1, proline-rich protein 1, RHS7, ROOT HAIR SPECIFIC 7 -0.231 -0.084
76 257668_at AT3G20460 [Major facilitator superfamily protein] -0.230 -0.243
77 246872_at AT5G26080 [proline-rich family protein] -0.227 -0.075
78 265658_at AT2G13810 ALD1, AGD2-like defense response protein 1, AtALD1, EDTS5, eds two suppressor 5 -0.225 0.099
79 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.223 -0.556
80 265387_at AT2G20670 unknown -0.220 0.083
81 252906_at AT4G39640 GGT1, gamma-glutamyl transpeptidase 1 -0.219 -0.094
82 251226_at AT3G62680 ATPRP3, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 3, PRP3, proline-rich protein 3 -0.219 -0.162
83 267035_at AT2G38400 AGT3, alanine:glyoxylate aminotransferase 3 -0.204 0.072
84 250938_at AT5G03180 [RING/U-box superfamily protein] -0.193 0.011
85 262705_at AT1G16260 [Wall-associated kinase family protein] -0.189 0.032
86 265945_at AT2G19500 ATCKX2, CKX2, cytokinin oxidase 2 -0.187 -0.092
87 256671_at AT3G52290 IQD3, IQ-domain 3 -0.186 0.050
88 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] -0.185 0.012
89 265213_at AT1G05020 [ENTH/ANTH/VHS superfamily protein] -0.184 -0.032
90 252819_at AT3G42600 unknown -0.177 -0.061
91 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 -0.177 0.023