4.0:Information of module
10min Reillumination IP RNA
In comparison with Light 0.5h polysome-bound help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0048573 photoperiodism, flowering BP 7.200e-16
GO:0009648 photoperiodism BP 1.262e-15
GO:0010228 vegetative to reproductive phase transit... BP 2.033e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044238 primary metabolic process BP 2.393e-06
GO:0071704 organic substance metabolic process BP 3.212e-06
GO:0009987 cellular process BP 1.581e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
10min Reillumination IP RNA		 Log2 signal ratio
Light 0.5h polysome-bound
1 262952_at AT1G75770 unknown 0.336 0.055
2 255232_at AT4G05330 AGD13, ARF-GAP domain 13 0.311 0.003
3 251554_at AT3G58670 unknown 0.275 0.030
4 260273_at AT1G80550 [Pentatricopeptide repeat (PPR) superfamily protein] 0.269 0.009
5 250124_at AT5G16480 AtPFA-DSP5, PFA-DSP5, plant and fungi atypical dual-specificity phosphatase 5 0.264 0.040
6 254362_at AT4G22160 unknown 0.264 -0.075
7 249174_at AT5G42900 COR27, cold regulated gene 27 0.262 0.075
8 265394_at AT2G20725 [CAAX amino terminal protease family protein] 0.256 0.050
9 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.251 0.253
10 266811_at AT2G44850 unknown 0.251 -0.045
11 258135_at AT3G24506 unknown 0.248 0.079
12 250310_at AT5G12230 MED19A 0.244 0.065
13 248509_at AT5G50335 unknown 0.241 -0.109
14 261317_at AT1G53030 [Cytochrome C oxidase copper chaperone (COX17)] 0.240 0.092
15 261941_at AT1G22490 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.240 -0.008
16 254626_at AT4G18400 unknown 0.239 0.086
17 247833_at AT5G58575 unknown 0.237 0.054
18 250972_at AT5G02840 LCL1, LHY/CCA1-like 1 0.236 0.023
19 245261_at AT4G14385 unknown 0.222 0.136
20 250755_at AT5G05750 [DNAJ heat shock N-terminal domain-containing protein] 0.221 0.011
21 258092_at AT3G14595 [Ribosomal protein L18ae family] 0.216 0.048
22 255931_at AT1G12710 AtPP2-A12, phloem protein 2-A12, PP2-A12, phloem protein 2-A12 0.214 0.044
23 255506_at AT4G02130 GATL6, galacturonosyltransferase-like 6, LGT10 0.211 -0.001
24 250555_at AT5G07950 unknown 0.210 0.054
25 246951_at AT5G04880 [expressed protein] 0.208 -0.013
26 245797_at AT1G45230 unknown 0.208 0.102
27 245778_at AT1G73530 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.205 0.107
28 248869_at AT5G46840 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.204 0.010
29 266238_at AT2G29400 PP1-AT, PROTEIN PHOSPHATASE 1, TOPP1, type one protein phosphatase 1 0.204 0.021
30 249872_at AT5G23130 [Peptidoglycan-binding LysM domain-containing protein] 0.202 0.015
31 249990_at AT5G18540 unknown 0.202 0.006
32 265142_at AT1G51360 ATDABB1, DIMERIC A/B BARREL DOMAINS-PROTEIN 1, DABB1, dimeric A/B barrel domainS-protein 1 0.202 0.081
33 257018_at AT3G19630 [Radical SAM superfamily protein] 0.200 0.062
34 260964_at AT1G45050 ATUBC2-1, UBC15, Arabidopsis thaliana ubiquitin-conjugating enzyme 15 0.200 0.069
35 258126_at AT3G24490 [Alcohol dehydrogenase transcription factor Myb/SANT-like family protein] 0.199 0.041
36 250856_at AT5G04810 [pentatricopeptide (PPR) repeat-containing protein] 0.196 0.031
37 250017_at AT5G18140 DJC69, DNA J protein A69 0.195 0.071
38 263839_at AT2G36900 ATMEMB11, MEMB11, membrin 11 0.195 0.064
39 249524_at AT5G38520 [alpha/beta-Hydrolases superfamily protein] 0.194 0.073
40 246319_at AT3G56680 [Single-stranded nucleic acid binding R3H protein] 0.191 0.034
41 246506_at AT5G16110 unknown 0.189 0.001
42 250175_at AT5G14390 [alpha/beta-Hydrolases superfamily protein] 0.188 0.001
43 249966_at AT5G19030 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.188 0.012
44 262498_at AT1G21710 ATOGG1, ARABIDOPSIS 8-OXOGUANINE-DNA GLYCOSYLASE 1, OGG1, 8-oxoguanine-DNA glycosylase 1 0.187 0.058
45 267405_at AT2G33740 CUTA 0.186 0.076
46 261823_at AT1G11400 PYM, partner of Y14-MAGO 0.184 0.062
47 253484_at AT4G31720 STG1, SALT TOLERANCE DURING GERMINATION 1, TAF10, TBP-ASSOCIATED FACTOR 10, TAFII15, TBP-associated factor II 15 0.183 0.049
48 256133_at AT1G13570 [F-box/RNI-like superfamily protein] 0.182 0.042
49 250567_at AT5G08090 unknown 0.182 0.030
50 254477_at AT4G20380 LSD1, LESION SIMULATING DISEASE 1 0.181 0.046
51 255878_at AT2G40620 [Basic-leucine zipper (bZIP) transcription factor family protein] 0.181 -0.024
52 266003_at AT2G37320 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.181 0.004
53 249544_at AT5G38110 ASF1B, anti- silencing function 1b, SGA01, SGA1 0.181 0.083
54 266051_at AT2G40760 [Rhodanese/Cell cycle control phosphatase superfamily protein] 0.180 0.061
55 267375_at AT2G26300 ATGPA1, ARABIDOPSIS THALIANA G PROTEIN ALPHA SUBUNIT 1, GP ALPHA 1, G protein alpha subunit 1, GPA1, G PROTEIN ALPHA SUBUNIT 1 0.180 0.053
56 250896_at AT5G03560 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.178 0.092
57 264265_at AT1G09280 unknown 0.178 0.018
58 263288_at AT2G36130 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 0.177 0.051
59 266923_at AT2G45980 ATI1, ATG8-interacting protein 1 0.177 0.080
60 252918_at AT4G38980 unknown 0.174 0.068
61 247908_at AT5G57440 GPP2, GLYCEROL-3-PHOSPHATASE 2, GS1 0.174 0.008
62 257818_at AT3G25120 [Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein] 0.173 0.046
63 261084_at AT1G07440 [NAD(P)-binding Rossmann-fold superfamily protein] 0.172 0.104
64 261757_at AT1G08210 [Eukaryotic aspartyl protease family protein] 0.172 0.019
65 250837_at AT5G04620 ATBIOF, biotin F, BIO4, biotin 4, BIOF, biotin F 0.171 0.041
66 256792_at AT3G22150 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.170 0.039
67 259378_at AT3G16310 1 0.170 0.038
68 261272_at AT1G26665 [Mediator complex, subunit Med10] 0.169 0.062
69 264586_at AT1G05160 ATKAO1, CYP88A3, cytochrome P450, family 88, subfamily A, polypeptide 3, KAO1, ENT-KAURENOIC ACID OXYDASE 1 0.169 0.009
70 244973_at ATCG00690 PSBT, photosystem II reaction center protein T, PSBTC -0.416 -0.034
71 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 -0.247 0.002
72 256577_at AT3G28220 [TRAF-like family protein] -0.224 0.015
73 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 -0.218 -0.096
74 267425_at AT2G34810 [FAD-binding Berberine family protein] -0.184 -0.037
75 263221_at AT1G30620 HSR8, HIGH SUGAR RESPONSE8, MUR4, MURUS 4, UXE1, UDP-D-XYLOSE 4-EPIMERASE 1 -0.176 -0.061
76 245002_at ATCG00270 PSBD, photosystem II reaction center protein D -0.165 -0.033
77 260987_at AT1G53590 NTMC2T6.1, NTMC2TYPE6.1 -0.144 -0.038
78 250161_at AT5G15240 [Transmembrane amino acid transporter family protein] -0.143 -0.032
79 258601_at AT3G02760 [Class II aaRS and biotin synthetases superfamily protein] -0.142 0.009
80 257846_at AT3G12910 [NAC (No Apical Meristem) domain transcriptional regulator superfamily protein] -0.140 0.009
81 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 -0.139 0.007
82 256952_at AT3G21160 MANIA, ALPHA-MANNOSIDASE IA, MNS2, alpha-mannosidase 2 -0.139 -0.013
83 255259_at AT4G05020 NDB2, NAD(P)H dehydrogenase B2 -0.138 -0.000
84 263219_at AT1G30600 [Subtilase family protein] -0.133 0.023
85 246500_at AT5G16270 ATRAD21.3, ARABIDOPSIS HOMOLOG OF RAD21 3, SYN4, sister chromatid cohesion 1 protein 4 -0.132 -0.002
86 262766_at AT1G13160 [ARM repeat superfamily protein] -0.131 -0.044
87 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 -0.128 -0.565
88 244962_at ATCG01050 NDHD -0.128 -0.010
89 254847_at AT4G11850 MEE54, maternal effect embryo arrest 54, PLDGAMMA1, phospholipase D gamma 1 -0.128 -0.033
90 263130_at AT1G78650 POLD3 -0.128 -0.010
91 244998_at ATCG00180 RPOC1 -0.126 -0.021
92 264932_at AT1G61240 unknown -0.126 0.027
93 245047_at ATCG00020 PSBA, photosystem II reaction center protein A -0.124 -0.014
94 251752_at AT3G55740 ATPROT2, PROLINE TRANSPORTER 2, PROT2, proline transporter 2 -0.119 -0.010
95 267645_at AT2G32860 BGLU33, beta glucosidase 33 -0.117 0.037
96 260143_at AT1G71880 ATSUC1, ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 1, SUC1, sucrose-proton symporter 1 -0.116 -0.092
97 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase -0.115 0.026
98 247153_at AT5G65700 BAM1, BARELY ANY MERISTEM 1 -0.115 -0.036
99 250021_at AT5G18190 [Protein kinase family protein] -0.114 -0.010
100 262871_at AT1G65010 [INVOLVED IN: flower development] -0.114 -0.049
101 258179_at AT3G21690 [MATE efflux family protein] -0.114 -0.037
102 259015_at AT3G07350 unknown -0.114 -0.156
103 251916_at AT3G53960 [Major facilitator superfamily protein] -0.114 -0.085
104 259982_at AT1G76410 ATL8 -0.112 -0.121
105 264330_at AT1G04120 ABCC5, ATP-binding cassette C5, ATABCC5, Arabidopsis thaliana ATP-binding cassette C5, ATMRP5, multidrug resistance-associated protein 5, MRP5, MULTIDRUG RESISTANCE PROTEIN 5, MRP5, multidrug resistance-associated protein 5 -0.112 -0.002
106 250490_at AT5G09760 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.111 -0.014
107 260374_at AT1G73960 TAF2, TBP-associated factor 2 -0.111 -0.005
108 252149_at AT3G51290 APSR1, Altered Phosphate Starvation Response 1 -0.109 -0.024
109 254922_at AT4G11370 RHA1A, RING-H2 finger A1A -0.109 0.020
110 256787_at AT3G13790 ATBFRUCT1, ATCWINV1, ARABIDOPSIS THALIANA CELL WALL INVERTASE 1 -0.109 0.010
111 267385_at AT2G44380 [Cysteine/Histidine-rich C1 domain family protein] -0.108 -0.069
112 250787_at AT5G05560 APC1, anaphase promoting complex 1, EMB2771, EMBRYO DEFECTIVE 2771 -0.107 -0.049
113 247425_at AT5G62550 unknown -0.106 -0.065
114 258555_at AT3G06860 ATMFP2, MULTIFUNCTIONAL PROTEIN 2, MFP2, multifunctional protein 2 -0.105 -0.012
115 266299_at AT2G29450 AT103-1A, ATGSTU1, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, ATGSTU5, glutathione S-transferase tau 5, GSTU5, glutathione S-transferase tau 5 -0.104 0.075
116 246660_at AT5G35180 [FUNCTIONS IN: phosphoinositide binding] -0.104 -0.000
117 248615_at AT5G49570 AtPNG1, peptide-N-glycanase 1, PNG1, peptide-N-glycanase 1 -0.100 -0.005
118 260629_at AT1G62330 [O-fucosyltransferase family protein] -0.097 0.006
119 254904_at AT4G11160 [Translation initiation factor 2, small GTP-binding protein] -0.097 0.021
120 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 -0.096 0.041
121 267376_at AT2G26330 ER, ERECTA, QRP1, QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1 -0.094 -0.003
122 250077_at AT5G16680 [RING/FYVE/PHD zinc finger superfamily protein] -0.094 0.019
123 255460_at AT4G02800 unknown -0.093 -0.044
124 252533_at AT3G46110 [LOCATED IN: plasma membrane] -0.093 -0.011
125 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] -0.092 -0.246
126 246831_at AT5G26340 ATSTP13, SUGAR TRANSPORT PROTEIN 13, MSS1, STP13, SUGAR TRANSPORT PROTEIN 13 -0.091 0.028
127 255039_at AT4G09570 ATCPK4, CPK4, calcium-dependent protein kinase 4 -0.091 0.014
128 250279_at AT5G13200 [GRAM domain family protein] -0.091 0.067
129 267618_at AT2G26760 CYCB1;4, Cyclin B1;4 -0.091 0.006
130 266017_at AT2G18690 unknown -0.090 -0.003
131 246763_at AT5G27150 AT-NHX1, ATNHX, ATNHX1, NHX1, Na+/H+ exchanger 1 -0.090 -0.004
132 260944_at AT1G45130 AtBGAL5, BGAL5, beta-galactosidase 5 -0.090 -0.018
133 245050_at ATCG00070 PSBK, photosystem II reaction center protein K precursor -0.089 -0.002
134 264352_at AT1G03270 unknown -0.089 -0.024
135 256908_at AT3G24040 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] -0.088 -0.001
136 249095_at AT5G43900 ATMYA2, ARABIDOPSIS MYOSIN 2, MYA2, myosin 2, XI-2, MYOSIN X1 2, XI-6, MYOSIN XI-6 -0.088 -0.035
137 258132_at AT3G24550 ATPERK1, proline-rich extensin-like receptor kinase 1, PERK1, proline-rich extensin-like receptor kinase 1 -0.088 -0.027