4.0:Information of module
Col ozone 3h
In comparison with root stele -S help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 4.208e-57
GO:0010243 response to organonitrogen compound BP 2.809e-55
GO:1901698 response to nitrogen compound BP 2.127e-42
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 7.486e-34
GO:0043414 macromolecule methylation BP 3.491e-28
GO:0032259 methylation BP 7.844e-28
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Col ozone 3h		 Log2 signal ratio
root stele -S
1 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.949 0.191
2 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.909 -0.431
3 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 0.877 -0.644
4 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.867 -0.202
5 261005_at AT1G26420 [FAD-binding Berberine family protein] 0.863 0.046
6 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 0.841 -0.169
7 264774_at AT1G22890 unknown 0.829 -0.227
8 258606_at AT3G02840 [ARM repeat superfamily protein] 0.814 -0.277
9 257540_at AT3G21520 AtDMP1, Arabidopsis thaliana DUF679 domain membrane protein 1, DMP1, DUF679 domain membrane protein 1 0.812 -0.133
10 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 0.786 0.081
11 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.777 -0.597
12 261394_at AT1G79680 ATWAKL10, WAKL10, WALL ASSOCIATED KINASE (WAK)-LIKE 10 0.764 -0.007
13 252346_at AT3G48650 [pseudogene] 0.755 0.013
14 257846_at AT3G12910 [NAC (No Apical Meristem) domain transcriptional regulator superfamily protein] 0.732 -0.055
15 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.731 -0.252
16 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.711 -0.318
17 254922_at AT4G11370 RHA1A, RING-H2 finger A1A 0.710 -0.102
18 259479_at AT1G19020 unknown 0.687 -0.214
19 254408_at AT4G21390 B120 0.681 -0.693
20 262085_at AT1G56060 unknown 0.656 -0.250
21 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] 0.655 -0.472
22 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.652 0.005
23 246858_at AT5G25930 [Protein kinase family protein with leucine-rich repeat domain] 0.616 0.038
24 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.604 -0.141
25 254318_at AT4G22530 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.604 -0.300
26 264746_at AT1G62300 ATWRKY6, WRKY6 0.588 0.013
27 256169_at AT1G51800 IOS1, IMPAIRED OOMYCETE SUSCEPTIBILITY 1 0.578 -0.191
28 259443_at AT1G02360 [Chitinase family protein] 0.576 -0.137
29 266983_at AT2G39400 [alpha/beta-Hydrolases superfamily protein] 0.576 -0.009
30 264866_at AT1G24140 [Matrixin family protein] 0.575 -0.337
31 246370_at AT1G51920 unknown 0.571 -0.171
32 258100_at AT3G23550 [MATE efflux family protein] 0.567 0.045
33 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 0.559 -0.587
34 250267_at AT5G12930 unknown 0.557 -0.149
35 255654_at AT4G00970 CRK41, cysteine-rich RLK (RECEPTOR-like protein kinase) 41 0.548 0.007
36 264757_at AT1G61360 [S-locus lectin protein kinase family protein] 0.538 -0.187
37 259428_at AT1G01560 ATMPK11, MAP kinase 11, MPK11, MAP kinase 11 0.531 0.083
38 259211_at AT3G09020 [alpha 1,4-glycosyltransferase family protein] 0.528 -0.654
39 250796_at AT5G05300 unknown 0.522 -0.200
40 263182_at AT1G05575 unknown 0.499 -0.530
41 267357_at AT2G40000 ATHSPRO2, ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, HSPRO2, ortholog of sugar beet HS1 PRO-1 2 0.496 -0.074
42 266658_at AT2G25735 unknown 0.492 -0.382
43 251248_at AT3G62150 ABCB21, ATP-binding cassette B21, PGP21, P-glycoprotein 21 0.488 -0.603
44 257206_at AT3G16530 [Legume lectin family protein] 0.488 0.036
45 265008_at AT1G61560 ATMLO6, MILDEW RESISTANCE LOCUS O 6, MLO6, MILDEW RESISTANCE LOCUS O 6 0.488 -0.431
46 246993_at AT5G67450 AZF1, zinc-finger protein 1, ZF1, zinc-finger protein 1 0.481 -0.584
47 253044_at AT4G37290 unknown 0.479 -0.188
48 251769_at AT3G55950 ATCRR3, CCR3, CRINKLY4 related 3 0.478 -0.025
49 255753_at AT1G18570 AtMYB51, myb domain protein 51, BW51A, BW51B, HIG1, HIGH INDOLIC GLUCOSINOLATE 1, MYB51, myb domain protein 51 0.478 -0.081
50 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 0.475 -0.047
51 254014_at AT4G26120 [Ankyrin repeat family protein / BTB/POZ domain-containing protein] 0.460 0.007
52 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 0.456 -0.293
53 257264_at AT3G22060 [Receptor-like protein kinase-related family protein] 0.446 -0.159
54 252133_at AT3G50900 unknown 0.445 -0.236
55 266017_at AT2G18690 unknown 0.440 -0.239
56 249928_at AT5G22250 AtCAF1b, CCR4- associated factor 1b, CAF1b, CCR4- associated factor 1b 0.438 -0.559
57 245711_at AT5G04340 C2H2, CZF2, COLD INDUCED ZINC FINGER PROTEIN 2, ZAT6, zinc finger of Arabidopsis thaliana 6 0.436 -0.515
58 253779_at AT4G28490 HAE, HAESA, RLK5, RECEPTOR-LIKE PROTEIN KINASE 5 0.435 0.134
59 256337_at AT1G72060 [serine-type endopeptidase inhibitors] 0.430 -0.274
60 252053_at AT3G52400 ATSYP122, SYP122, syntaxin of plants 122 0.428 -0.107
61 259272_at AT3G01290 AtHIR2, HIR2, hypersensitive induced reaction 2 0.423 -0.133
62 267028_at AT2G38470 ATWRKY33, WRKY DNA-BINDING PROTEIN 33, WRKY33, WRKY DNA-binding protein 33 0.404 -0.179
63 259033_at AT3G09405 [Pectinacetylesterase family protein] 0.400 0.383
64 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.395 -0.371
65 264663_at AT1G09970 LRR XI-23, RLK7, receptor-like kinase 7 0.395 -0.031
66 248794_at AT5G47220 ATERF-2, ETHYLENE RESPONSE FACTOR- 2, ATERF2, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2, ERF2, ethylene responsive element binding factor 2 0.386 -0.157
67 253796_at AT4G28460 unknown 0.386 -0.242
68 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 0.377 -0.706
69 263935_at AT2G35930 AtPUB23, PUB23, plant U-box 23 0.374 -0.141
70 262381_at AT1G72900 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.373 -0.803
71 245543_at AT4G15260 [UDP-Glycosyltransferase superfamily protein] 0.370 0.403
72 249987_at AT5G18490 unknown 0.370 -0.086
73 253992_at AT4G26060 [Ribosomal protein L18ae family] 0.369 -0.248
74 253414_at AT4G33050 AtIQM1, EDA39, embryo sac development arrest 39, IQM1, IQ-motif protein 1 0.363 -0.162
75 254487_at AT4G20780 CML42, calmodulin like 42 0.363 -0.717
76 252533_at AT3G46110 [LOCATED IN: plasma membrane] 0.360 -0.395
77 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.357 -0.330
78 258787_at AT3G11840 PUB24, plant U-box 24 0.355 -0.297
79 245777_at AT1G73540 atnudt21, nudix hydrolase homolog 21, NUDT21, nudix hydrolase homolog 21 0.349 -0.383
80 258282_at AT3G26910 [hydroxyproline-rich glycoprotein family protein] 0.347 0.086
81 248686_at AT5G48540 [receptor-like protein kinase-related family protein] 0.347 -0.187
82 256799_at AT3G18560 unknown 0.345 -0.335
83 253915_at AT4G27280 [Calcium-binding EF-hand family protein] 0.339 0.010
84 267083_at AT2G41100 ATCAL4, ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TCH3, TOUCH 3 0.335 -0.197
85 255479_at AT4G02380 AtLEA5, Arabidopsis thaliana late embryogenensis abundant like 5, SAG21, senescence-associated gene 21 0.333 -0.104
86 254427_at AT4G21190 emb1417, embryo defective 1417 -0.414 0.193
87 261921_at AT1G65900 unknown -0.396 0.250
88 256890_at AT3G23830 AtGRP4, GR-RBP4, GRP4, glycine-rich RNA-binding protein 4 -0.379 0.315
89 245465_at AT4G16590 ATCSLA01, cellulose synthase-like A01, ATCSLA1, CELLULOSE SYNTHASE-LIKE A1, CSLA01, CSLA01, cellulose synthase-like A01 -0.356 -0.033
90 260292_at AT1G63680 APG13, ALBINO OR PALE-GREEN 13, ATMURE, MURE, PDE316, PIGMENT DEFECTIVE EMBRYO 316 -0.343 0.411
91 261762_at AT1G15510 ATECB2, ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2, ECB2, EARLY CHLOROPLAST BIOGENESIS2, VAC1, VANILLA CREAM 1 -0.336 0.439
92 266687_at AT2G19670 ATPRMT1A, ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1A, PRMT1A, protein arginine methyltransferase 1A -0.333 0.457
93 261248_at AT1G20030 [Pathogenesis-related thaumatin superfamily protein] -0.326 -0.191
94 250528_at AT5G08600 [U3 ribonucleoprotein (Utp) family protein] -0.307 -0.019
95 264271_at AT1G60270 BGLU6, beta glucosidase 6 -0.304 -0.124
96 262236_at AT1G48330 unknown -0.304 -0.233
97 246746_at AT5G27820 [Ribosomal L18p/L5e family protein] -0.290 0.087
98 245749_at AT1G51090 [Heavy metal transport/detoxification superfamily protein ] -0.284 -0.168
99 257875_at AT3G17120 unknown -0.280 0.050
100 253351_at AT4G33700 unknown -0.273 0.064
101 250992_at AT5G02260 ATEXP9, ATEXPA9, expansin A9, ATHEXP ALPHA 1.10, EXP9, EXPA9, expansin A9 -0.272 0.035
102 248753_at AT5G47630 mtACP3, mitochondrial acyl carrier protein 3 -0.269 0.385
103 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 -0.265 -0.018
104 251355_at AT3G61100 [Putative endonuclease or glycosyl hydrolase] -0.256 0.198
105 266951_at AT2G18940 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.250 0.406
106 262748_at AT1G28610 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.249 0.054
107 246797_at AT5G26790 unknown -0.248 0.160
108 263688_at AT1G26920 unknown -0.241 -0.542
109 265730_at AT2G32220 [Ribosomal L27e protein family] -0.238 0.002
110 250412_at AT5G11150 ATVAMP713, vesicle-associated membrane protein 713, VAMP713, VAMP713, vesicle-associated membrane protein 713 -0.234 0.038
111 262706_at AT1G16280 AtRH36, Arabidopsis thaliana RNA helicase 36, RH36, RNA helicase 36, SWA3, SLOW WALKER 3 -0.232 0.590
112 265991_at AT2G24120 PDE319, PIGMENT DEFECTIVE 319, SCA3, SCABRA 3 -0.230 0.320
113 266253_at AT2G27840 HD2D, histone deacetylase 2D, HDA13, HISTONE DEACETYLASE 13, HDT04, HDT4 -0.229 0.654
114 258851_at AT3G03190 ATGSTF11, glutathione S-transferase F11, ATGSTF6, ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, GSTF11, glutathione S-transferase F11 -0.228 0.180
115 263912_at AT2G36390 BE3, BRANCHING ENZYME 3, SBE2.1, starch branching enzyme 2.1 -0.228 0.253
116 248984_at AT5G45140 NRPC2, nuclear RNA polymerase C2 -0.227 0.225
117 249144_at AT5G43270 SPL2, squamosa promoter binding protein-like 2 -0.225 0.106
118 253021_at AT4G38050 [Xanthine/uracil permease family protein] -0.224 0.248
119 264142_at AT1G78930 [Mitochondrial transcription termination factor family protein] -0.219 0.164
120 260781_at AT1G14620 DECOY, DECOY -0.217 0.040
121 264045_at AT2G22450 AtRIBA2, RIBA2, homolog of ribA 2 -0.213 0.306
122 248891_at AT5G46280 MCM3, MINICHROMOSOME MAINTENANCE 3 -0.213 0.594
123 250744_at AT5G05840 unknown -0.212 0.005
124 258232_at AT3G27750 EMB3123, EMBRYO DEFECTIVE 3123, THA8, Thylakoid Assembly 8 -0.208 -0.046
125 263548_at AT2G21660 ATGRP7, GLYCINE RICH PROTEIN 7, CCR2, cold, circadian rhythm, and rna binding 2, GR-RBP7, GLYCINE-RICH RNA-BINDING PROTEIN 7, GRP7, GLYCINE-RICH RNA-BINDING PROTEIN 7 -0.207 0.296
126 261549_at AT1G63470 AHL5, AT-hook motif nuclear localized protein 5 -0.205 0.294
127 254080_at AT4G25630 ATFIB2, FIB2, fibrillarin 2 -0.201 0.534
128 261603_at AT1G49600 ATRBP47A, RNA-binding protein 47A, RBP47A, RNA-binding protein 47A -0.201 0.293
129 264731_at AT1G62150 [Mitochondrial transcription termination factor family protein] -0.198 0.389
130 260489_at AT1G51610 [Cation efflux family protein] -0.198 0.260
131 253092_at AT4G37380 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.194 0.268
132 252143_at AT3G51150 [ATP binding microtubule motor family protein] -0.189 -0.251
133 252175_at AT3G50700 AtIDD2, indeterminate(ID)-domain 2, IDD2, indeterminate(ID)-domain 2 -0.185 -0.052
134 247036_at AT5G67130 [PLC-like phosphodiesterases superfamily protein] -0.184 0.237
135 245644_at AT1G25320 [Leucine-rich repeat protein kinase family protein] -0.184 0.014
136 259942_at AT1G71260 ATWHY2, WHIRLY 2, WHY2, WHIRLY 2 -0.184 0.127
137 263864_at AT2G04530 CPZ, TRZ2, TRNASE Z 2 -0.183 0.325
138 251271_at AT3G62050 [Putative endonuclease or glycosyl hydrolase] -0.182 0.200
139 258475_at AT3G02660 EMB2768, EMBRYO DEFECTIVE 2768, FAC31, EMBRYONIC FACTOR 31 -0.182 0.299
140 247224_at AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 -0.180 -0.027
141 267174_at AT2G37600 [Ribosomal protein L36e family protein] -0.180 0.093
142 251864_at AT3G54920 PMR6, powdery mildew resistant 6 -0.179 0.043
143 245502_at AT4G15640 unknown -0.178 0.244
144 251699_at AT3G56630 CYP94D2, cytochrome P450, family 94, subfamily D, polypeptide 2 -0.178 0.021
145 263679_at AT1G59990 EMB3108, EMBRYO DEFECTIVE 3108, HS3, HEAVY SEED 3, RH22, RNA helicase 22 -0.176 0.420
146 260677_at AT1G07910 AtRLG1, AtRLG1, ATRNL, ARABIDOPSIS THALIANA RNA LIGASE, RNL, RNAligase -0.174 0.287
147 263083_at AT2G27190 ATPAP1, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 1, ATPAP12, PURPLE ACID PHOSPHATASE 12, PAP1, PURPLE ACID PHOSPHATASE 1, PAP12, purple acid phosphatase 12 -0.173 0.158
148 265383_at AT2G16780 MSI02, MSI2, MULTICOPY SUPPRESSOR OF IRA1 2, NFC02, NFC2, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2 -0.173 0.387
149 247461_at AT5G62100 ATBAG2, BCL-2-associated athanogene 2, BAG2, BCL-2-associated athanogene 2 -0.172 -0.320
150 250546_at AT5G08180 [Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein] -0.172 0.487
151 249014_at AT5G44710 unknown -0.171 -0.030
152 253213_at AT4G34910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.170 0.594
153 258995_at AT3G01790 [Ribosomal protein L13 family protein] -0.170 0.126
154 252942_at AT4G39300 unknown -0.170 0.172
155 267421_at AT2G35040 [AICARFT/IMPCHase bienzyme family protein] -0.168 0.280
156 245849_at AT5G13520 [peptidase M1 family protein] -0.167 0.271
157 253892_at AT4G27620 unknown -0.167 -0.104
158 252625_at AT3G44750 ATHD2A, HD2A, HISTONE DEACETYLASE 2A, HDA3, histone deacetylase 3, HDT1 -0.167 0.553
159 251611_at AT3G57940 unknown -0.166 0.519
160 261131_at AT1G19835 unknown -0.166 -0.093
161 251753_at AT3G55760 unknown -0.166 0.492
162 253921_at AT4G26900 AT-HF, HIS HF, HISN4 -0.165 0.301
163 248283_at AT5G52920 PKP-BETA1, plastidic pyruvate kinase beta subunit 1, PKP1, PLASTIDIAL PYRUVATE KINASE 1, PKP2, PLASTIDIAL PYRUVATE KINASE 2 -0.164 0.350
164 262818_at AT1G11755 LEW1, LEAF WILTING 1 -0.164 0.015
165 257619_at AT3G24810 ICK3, KRP5, kip-related protein 5 -0.164 -0.048
166 246572_at AT5G15010 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.160 0.573
167 245106_at AT2G41650 unknown -0.160 0.186
168 250326_at AT5G12080 ATMSL10, MSL10, mechanosensitive channel of small conductance-like 10 -0.160 0.144
169 259761_at AT1G77590 LACS9, long chain acyl-CoA synthetase 9 -0.160 0.591