4.0:Information of module
rao1-2
In comparison with Seedling KUA1-IOX est help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009718 anthocyanin-containing compound biosynth... BP 4.129e-08
GO:0009889 regulation of biosynthetic process BP 1.083e-07
GO:0010224 response to UV-B BP 1.982e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009414 response to water deprivation BP 5.740e-06
GO:0009415 response to water BP 1.017e-05
GO:0007623 circadian rhythm BP 1.663e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rao1-2		 Log2 signal ratio
Seedling KUA1-IOX est
1 247463_at AT5G62210 [Embryo-specific protein 3, (ATS3)] 0.429 -0.066
2 254234_at AT4G23680 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.428 -0.046
3 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 0.423 -0.084
4 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 0.353 -0.172
5 254574_at AT4G19430 unknown 0.350 -0.028
6 249614_at AT5G37300 WSD1 0.343 0.090
7 264872_at AT1G24260 AGL9, AGAMOUS-like 9, SEP3, SEPALLATA3 0.343 -0.067
8 252629_at AT3G44970 [Cytochrome P450 superfamily protein] 0.332 -0.196
9 266364_at AT2G41230 ORS1, ORGAN SIZE RELATED 1 0.307 0.186
10 260116_at AT1G33960 AIG1, AVRRPT2-INDUCED GENE 1 0.306 0.060
11 255578_at AT4G01450 UMAMIT30, Usually multiple acids move in and out Transporters 30 0.284 0.031
12 256442_at AT3G10930 unknown 0.276 0.014
13 250207_at AT5G13930 ATCHS, CHS, CHALCONE SYNTHASE, TT4, TRANSPARENT TESTA 4 0.272 -0.097
14 260059_at AT1G78090 ATTPPB, Arabidopsis thaliana trehalose-6-phosphate phosphatase B, TPPB, trehalose-6-phosphate phosphatase B 0.270 -0.001
15 264016_at AT2G21220 SAUR12, SMALL AUXIN UPREGULATED RNA 12 0.270 -0.082
16 261150_at AT1G19640 JMT, jasmonic acid carboxyl methyltransferase 0.258 0.026
17 252421_at AT3G47540 [Chitinase family protein] 0.256 0.002
18 256266_at AT3G12320 LNK3, night light-inducible and clock-regulated 3 0.251 -0.049
19 248467_at AT5G50800 AtSWEET13, SWEET13 0.250 0.011
20 253309_at AT4G33790 CER4, ECERIFERUM 4, FAR3, FATTY ACID REDUCTASE 3, G7 0.249 0.008
21 246522_at AT5G15830 AtbZIP3, basic leucine-zipper 3, bZIP3, basic leucine-zipper 3 0.242 0.007
22 260462_at AT1G10970 ATZIP4, ZIP4, zinc transporter 4 precursor 0.232 -0.026
23 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 0.226 -0.043
24 259735_at AT1G64405 unknown 0.225 -0.047
25 258240_at AT3G27660 OLE3, OLEOSIN 3, OLEO4, oleosin 4 0.223 -0.024
26 264527_at AT1G30760 [FAD-binding Berberine family protein] 0.221 -0.471
27 249860_at AT5G22860 [Serine carboxypeptidase S28 family protein] 0.218 0.101
28 249932_at AT5G22390 unknown 0.217 0.014
29 246310_at AT3G51895 AST12, SULTR3;1, sulfate transporter 3;1 0.211 -0.022
30 260632_at AT1G62360 BUM, BUMBERSHOOT, BUM1, BUMBERSHOOT 1, SHL, SHOOTLESS, STM, SHOOT MERISTEMLESS, WAM, WALDMEISTER, WAM1, WALDMEISTER 1 0.209 -0.068
31 248596_at AT5G49330 ATMYB111, ARABIDOPSIS MYB DOMAIN PROTEIN 111, MYB111, myb domain protein 111, PFG3, PRODUCTION OF FLAVONOL GLYCOSIDES 3 0.203 0.027
32 249721_at AT5G24655 LSU4, RESPONSE TO LOW SULFUR 4 0.199 0.057
33 264729_at AT1G22990 HIPP22, heavy metal associated isoprenylated plant protein 22 0.199 -0.051
34 260417_at AT1G69770 CMT3, chromomethylase 3 0.197 -0.016
35 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 0.197 -0.160
36 251592_at AT3G57670 NTT, NO TRANSMITTING TRACT, WIP2, WIP domain protein 2 0.196 0.009
37 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR 0.194 -0.041
38 261772_at AT1G76240 unknown 0.187 -0.036
39 258349_at AT3G17609 HYH, HY5-homolog 0.187 0.142
40 245800_at AT1G46264 AT-HSFB4, HSFB4, heat shock transcription factor B4, SCZ, SCHIZORIZA 0.186 0.006
41 257858_at AT3G12920 BRG3, BOI-related gene 3 0.186 0.043
42 264697_at AT1G70210 ATCYCD1;1, CYCD1;1, CYCLIN D1;1 0.185 -0.083
43 256018_at AT1G58300 HO4, heme oxygenase 4 0.185 0.035
44 252322_at AT3G48550 unknown 0.180 -0.017
45 259801_at AT1G72230 [Cupredoxin superfamily protein] 0.179 -0.072
46 263680_at AT1G26930 [Galactose oxidase/kelch repeat superfamily protein] 0.178 0.015
47 258890_at AT3G05690 ATHAP2B, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 2B, HAP2B, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 2B, NF-YA2, nuclear factor Y, subunit A2, UNE8, UNFERTILIZED EMBRYO SAC 8 0.177 -0.023
48 255538_at AT4G01680 AtMYB55, myb domain protein 55, MYB55, myb domain protein 55 0.176 -0.170
49 267008_at AT2G39350 ABCG1, ATP-binding cassette G1 0.174 0.119
50 253168_at AT4G35070 [SBP (S-ribonuclease binding protein) family protein] 0.174 0.009
51 259730_at AT1G77660 [Histone H3 K4-specific methyltransferase SET7/9 family protein] 0.172 0.053
52 253799_at AT4G28140 [Integrase-type DNA-binding superfamily protein] -0.578 -0.008
53 265418_at AT2G20880 AtERF53, ERF53, ERF domain 53 -0.420 0.023
54 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 -0.380 -0.041
55 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 -0.326 -0.045
56 259766_at AT1G64360 unknown -0.305 0.053
57 258139_at AT3G24520 AT-HSFC1, HSFC1, heat shock transcription factor C1 -0.304 -0.050
58 254066_at AT4G25480 ATCBF3, CBF3, C-REPEAT BINDING FACTOR 3, DREB1A, dehydration response element B1A -0.284 0.015
59 248394_at AT5G52070 [Agenet domain-containing protein] -0.280 -0.011
60 248218_at AT5G53710 unknown -0.276 0.067
61 262040_at AT1G80080 AtRLP17, Receptor Like Protein 17, TMM, TOO MANY MOUTHS -0.270 -0.054
62 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 -0.262 0.110
63 250043_at AT5G18430 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.261 -0.013
64 257985_at AT3G20810 JMJ30, Jumonji C domain-containing protein 30, JMJD5, jumonji domain containing 5 -0.244 -0.003
65 262543_at AT1G34245 EPF2, EPIDERMAL PATTERNING FACTOR 2 -0.240 -0.034
66 247406_at AT5G62920 ARR6, response regulator 6 -0.234 0.124
67 263495_at AT2G42530 COR15B, cold regulated 15b -0.232 0.204
68 260264_at AT1G68500 unknown -0.231 0.007
69 263915_at AT2G36430 unknown -0.228 -0.139
70 247573_at AT5G61160 AACT1, anthocyanin 5-aromatic acyltransferase 1 -0.227 0.034
71 267364_at AT2G40080 ELF4, EARLY FLOWERING 4 -0.225 -0.002
72 259793_at AT1G64380 [Integrase-type DNA-binding superfamily protein] -0.221 0.068
73 245616_at AT4G14480 [Protein kinase superfamily protein] -0.218 -0.057
74 250083_at AT5G17220 ATGSTF12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12, GST26, GLUTATHIONE S-TRANSFERASE 26, GSTF12, glutathione S-transferase phi 12, TT19, TRANSPARENT TESTA 19 -0.216 0.011
75 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] -0.213 0.023
76 251317_at AT3G61490 [Pectin lyase-like superfamily protein] -0.202 -0.071
77 253332_at AT4G33420 [Peroxidase superfamily protein] -0.201 0.077
78 248496_at AT5G50790 AtSWEET10, SWEET10 -0.200 -0.070
79 262212_at AT1G74890 ARR15, response regulator 15 -0.200 0.041
80 255438_at AT4G03070 AOP, AOP1, AOP1.1 -0.197 -0.124
81 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 -0.192 -0.034
82 262704_at AT1G16530 ASL9, ASYMMETRIC LEAVES 2-like 9, LBD3, LOB DOMAIN-CONTAINING PROTEIN 3 -0.187 0.030
83 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] -0.186 -0.006
84 253331_at AT4G33490 [Eukaryotic aspartyl protease family protein] -0.186 0.001
85 253622_at AT4G30560 ATCNGC9, cyclic nucleotide gated channel 9, CNGC9, cyclic nucleotide gated channel 9 -0.185 0.042
86 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) -0.181 0.038
87 246860_at AT5G25840 unknown -0.178 -0.012
88 262680_at AT1G75880 [SGNH hydrolase-type esterase superfamily protein] -0.176 -0.120
89 251791_at AT3G55500 ATEXP16, ATEXPA16, expansin A16, ATHEXP ALPHA 1.7, EXP16, EXPANSIN 16, EXPA16, expansin A16 -0.176 0.045
90 260633_at AT1G62400 HT1, high leaf temperature 1 -0.168 -0.058
91 248764_at AT5G47640 NF-YB2, nuclear factor Y, subunit B2 -0.167 -0.058
92 246107_at AT5G28700 [pseudogene] -0.166 -0.008
93 264782_at AT1G08810 AtMYB60, myb domain protein 60, MYB60, myb domain protein 60 -0.162 -0.021
94 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] -0.162 -0.082
95 262396_at AT1G49470 unknown -0.157 -0.038
96 247356_at AT5G63800 BGAL6, beta-galactosidase 6, MUM2, MUCILAGE-MODIFIED 2 -0.157 -0.085
97 254791_at AT4G12910 scpl20, serine carboxypeptidase-like 20 -0.156 -0.010
98 265002_at AT1G24400 AATL2, AMINO ACID TRANSPORTER-LIKE PROTEIN 2, ATLHT2, ARABIDOPSIS LYSINE HISTIDINE TRANSPORTER 2, LHT2, lysine histidine transporter 2 -0.152 -0.050
99 262464_at AT1G50280 [Phototropic-responsive NPH3 family protein] -0.150 -0.031
100 261350_at AT1G79770 unknown -0.149 0.055
101 249559_at AT5G38320 unknown -0.146 -0.008