4.0:Information of module
Total RNA 35S:HF-RPL18
In comparison with seedling 3h after Gamma WT help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0071407 cellular response to organic cyclic comp... BP 8.912e-06
GO:0009863 salicylic acid mediated signaling pathwa... BP 1.780e-05
GO:0071446 cellular response to salicylic acid stim... BP 1.780e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015706 nitrate transport BP 4.706e-03
GO:0071705 nitrogen compound transport BP 1.274e-02
GO:0010167 response to nitrate BP 1.570e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Total RNA 35S:HF-RPL18		 Log2 signal ratio
seedling 3h after Gamma WT
1 262900_at AT1G59890 SNL5, SIN3-like 5 0.268 0.032
2 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.241 0.053
3 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.217 0.216
4 265658_at AT2G13810 ALD1, AGD2-like defense response protein 1, AtALD1, EDTS5, eds two suppressor 5 0.190 0.176
5 258900_at AT3G05590 RPL18, ribosomal protein L18 0.188 0.001
6 261005_at AT1G26420 [FAD-binding Berberine family protein] 0.165 0.140
7 261463_at AT1G07740 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.156 -0.038
8 261973_at AT1G64610 [Transducin/WD40 repeat-like superfamily protein] 0.144 0.091
9 247016_at AT5G66970 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.130 0.114
10 255841_at AT2G33260 [Tryptophan/tyrosine permease] 0.129 0.036
11 254246_at AT4G23250 CRK17, CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 17, DUF26-21, EMB1290, EMBRYO DEFECTIVE 1290, RKC1, RECEPTOR-LIKE KINASE THALIANACOL-0GENOMICLIBRARY(CLONTECH).THEPOSITIVEPHAGECLONES C-X8-C-X2-C CLASS 1 0.128 0.081
12 256519_at AT1G66110 unknown 0.127 0.126
13 247632_at AT5G60460 [Preprotein translocase Sec, Sec61-beta subunit protein] -0.315 0.006
14 251617_at AT3G58000 [VQ motif-containing protein] -0.234 -0.011
15 265057_at AT1G52140 unknown -0.176 -0.017
16 252881_at AT4G39610 unknown -0.170 -0.157
17 266564_at AT2G24000 scpl22, serine carboxypeptidase-like 22 -0.147 -0.071
18 261545_at AT1G63530 unknown -0.146 0.035
19 248987_at AT5G45180 [Flavin-binding monooxygenase family protein] -0.128 -0.022
20 261928_at AT1G22480 [Cupredoxin superfamily protein] -0.127 0.045
21 249468_at AT5G39650 unknown -0.122 -0.097
22 254575_at AT4G19460 [UDP-Glycosyltransferase superfamily protein] -0.121 0.071
23 263307_at AT2G12520 unknown -0.117 0.104