4.0:Information of module
Polysomal RNA 35S:AtCSP1-FH1 cold
In comparison with calcicole ecotype Cal-0 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0007126 meiotic nuclear division BP 1.091e-02
GO:0009086 methionine biosynthetic process BP 1.315e-02
GO:0071103 DNA conformation change BP 1.315e-02
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006364 rRNA processing BP 2.420e-04
GO:0022613 ribonucleoprotein complex biogenesis BP 2.526e-04
GO:0016072 rRNA metabolic process BP 2.527e-04
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Polysomal RNA 35S:AtCSP1-FH1 cold		 Log2 signal ratio
calcicole ecotype Cal-0
1 253129_at AT4G36020 AtCSP1, CSDP1, cold shock domain protein 1, CSP1, cold shock protein 1 0.348 -0.063
2 260101_at AT1G73260 ATKTI1, ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, KTI1, kunitz trypsin inhibitor 1 0.250 0.025
3 266751_at AT2G47020 [Peptide chain release factor 1] 0.204 -0.053
4 246827_at AT5G26330 [Cupredoxin superfamily protein] 0.192 -0.057
5 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] 0.161 -0.080
6 261466_at AT1G07690 unknown 0.146 -0.065
7 257978_at AT3G20860 ATNEK5, NIMA-related kinase 5, NEK5, NIMA-related kinase 5 0.137 -0.092
8 253690_at AT4G29550 unknown 0.134 -0.331
9 254629_at AT4G18425 unknown 0.125 0.048
10 259285_at AT3G11460 MEF10, mitochondrial RNA editing factor 10 0.116 0.056
11 257757_at AT3G18660 GUX1, glucuronic acid substitution of xylan 1, PGSIP1, plant glycogenin-like starch initiation protein 1 0.112 -0.036
12 251116_at AT3G63470 scpl40, serine carboxypeptidase-like 40 0.110 -0.067
13 251568_at AT3G58280 [Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain] 0.108 -0.039
14 252011_at AT3G52720 ACA1, alpha carbonic anhydrase 1, ATACA1, A. THALIANA ALPHA CARBONIC ANHYDRASE 1, CAH1, CARBONIC ANHYDRASE 1 0.100 0.009
15 249533_at AT5G38790 unknown -0.153 0.011
16 267466_at AT2G19010 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.147 -0.027
17 246903_at AT5G25750 unknown -0.141 0.004
18 253057_at AT4G37670 NAGS2, N-acetyl-l-glutamate synthase 2 -0.139 0.037
19 260013_at AT1G68090 ANN5, annexin 5, ANNAT5, ANNEXIN ARABIDOPSIS THALIANA 5 -0.136 -0.008
20 265721_at AT2G40090 ATATH9, ABC2 homolog 9, ATH9, ABC2 homolog 9 -0.127 0.090
21 262192_at AT1G77830 [RING/U-box superfamily protein] -0.123 -0.005
22 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 -0.113 0.348
23 244907_at ATMG00710 ORF120 -0.112 -0.000
24 249326_at AT5G40840 AtRAD21.1, Sister chromatid cohesion 1 (SCC1) protein homolog 2, SYN2 -0.109 0.027
25 248450_at AT5G51290 ACD5, ACCELERATED CELL DEATH 5 -0.098 -0.017
26 249715_at AT5G35760 [Beta-galactosidase related protein] -0.096 -0.031
27 257450_at AT1G10530 unknown -0.094 -0.041