4.0:Information of module
rao2 H2O2 3h
In comparison with root endodermis and quiescent center pH4.6 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0008654 phospholipid biosynthetic process BP 5.286e-11
GO:0019682 glyceraldehyde-3-phosphate metabolic pro... BP 8.370e-11
GO:0019288 isopentenyl diphosphate biosynthetic pro... BP 4.768e-10
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 5.279e-18
GO:0050896 response to stimulus BP 3.785e-16
GO:0009056 catabolic process BP 1.127e-14
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rao2 H2O2 3h		 Log2 signal ratio
root endodermis and quiescent center pH4.6
1 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.633 0.142
2 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 0.357 0.011
3 246888_at AT5G26270 unknown 0.353 -0.128
4 247224_at AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 0.318 -0.082
5 262719_at AT1G43590 unknown 0.282 -0.007
6 265993_at AT2G24160 [pseudogene] 0.248 -0.045
7 253971_at AT4G26530 AtFBA5, FBA5, fructose-bisphosphate aldolase 5 0.240 -0.007
8 265893_at AT2G15042 [Leucine-rich repeat (LRR) family protein] 0.234 -0.003
9 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 0.232 -0.086
10 260973_at AT1G53490 HEI10, homolog of human HEI10 ( Enhancer of cell Invasion No.10) 0.228 0.126
11 251977_at AT3G53250 SAUR57, SMALL AUXIN UPREGULATED RNA 57 0.228 -0.002
12 267265_at AT2G22980 SCPL13, serine carboxypeptidase-like 13 0.225 -0.212
13 256943_at AT3G18910 ETP2, EIN2 targeting protein2 0.224 0.128
14 263674_at AT2G04790 unknown 0.217 0.005
15 265902_at AT2G25590 [Plant Tudor-like protein] 0.204 0.043
16 267622_at AT2G39690 unknown 0.204 0.005
17 247100_at AT5G66520 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.201 -0.023
18 246947_at AT5G25120 CYP71B11, ytochrome p450, family 71, subfamily B, polypeptide 11 0.190 -0.018
19 247223_at AT5G65070 AGL69, AGAMOUS-like 69, FCL4, MAF4, MADS AFFECTING FLOWERING 4 0.184 -0.014
20 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 0.178 -0.062
21 256894_at AT3G21870 CYCP2;1, cyclin p2;1 0.173 -0.032
22 255016_at AT4G10120 ATSPS4F 0.168 -0.045
23 262750_at AT1G28710 [Nucleotide-diphospho-sugar transferase family protein] 0.167 -0.169
24 251535_at AT3G58540 unknown 0.165 0.066
25 267337_at AT2G39980 [HXXXD-type acyl-transferase family protein] 0.163 0.063
26 266363_at AT2G41250 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.156 -0.024
27 247977_at AT5G56850 unknown 0.153 -0.018
28 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] 0.153 0.012
29 259753_at AT1G71050 HIPP20, heavy metal associated isoprenylated plant protein 20 0.153 -0.388
30 259573_at AT1G20390 [gypsy-like retrotransposon family, has a 1.5e-251 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] 0.151 -0.095
31 265511_at AT2G05540 [Glycine-rich protein family] 0.151 -0.025
32 266423_at AT2G41340 RPB5D, RNA polymerase II fifth largest subunit, D 0.149 -0.013
33 263986_at AT2G42790 CSY3, citrate synthase 3 0.147 0.048
34 264343_at AT1G11850 unknown 0.145 -0.112
35 246633_at AT1G29720 [Leucine-rich repeat transmembrane protein kinase] 0.145 -0.001
36 247880_at AT5G57780 P1R1, P1R1 0.144 -0.234
37 249058_at AT5G44510 TAO1, target of AVRB operation1 0.142 0.001
38 250286_at AT5G13320 AtGH3.12, GDG1, GH3-LIKE DEFENSE GENE 1, GH3.12, GRETCHEN HAGEN 3.12, PBS3, AVRPPHB SUSCEPTIBLE 3, WIN3, HOPW1-1-INTERACTING 3 0.140 0.103
39 260527_at AT2G47270 UPB1, UPBEAT1 0.140 -0.076
40 251759_at AT3G55630 ATDFD, DHFS-FPGS homolog D, DFD, DHFS-FPGS homolog D, FPGS3, folylpolyglutamate synthetase 3 0.138 0.206
41 251218_at AT3G62410 CP12, CP12 DOMAIN-CONTAINING PROTEIN 1, CP12-2, CP12 domain-containing protein 2 0.138 0.082
42 262366_at AT1G72890 [Disease resistance protein (TIR-NBS class)] 0.138 -0.002
43 262786_at AT1G10740 [alpha/beta-Hydrolases superfamily protein] 0.136 -0.077
44 252838_at AT3G42090 [contains domain LIN-9 RELATED (PTHR21689)] 0.135 0.030
45 264201_at AT1G22630 unknown 0.134 -0.046
46 245877_at AT1G26220 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.133 0.007
47 262396_at AT1G49470 unknown 0.131 -0.215
48 259901_at AT1G74180 AtRLP14, receptor like protein 14, RLP14, receptor like protein 14 0.129 0.069
49 261931_at AT1G22430 [GroES-like zinc-binding dehydrogenase family protein] 0.126 -0.029
50 260317_at AT1G63800 UBC5, ubiquitin-conjugating enzyme 5 0.126 -0.018
51 264071_at AT2G27920 SCPL51, serine carboxypeptidase-like 51 0.126 -0.305
52 250985_at AT5G02830 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.125 -0.026
53 249212_at AT5G42690 unknown 0.123 -0.096
54 260221_at AT1G74670 GASA6, GA-stimulated Arabidopsis 6 0.122 -0.021
55 262601_at AT1G15310 ATHSRP54A, signal recognition particle 54 kDa subunit, SRP54-1, SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT 0.121 0.020
56 257174_at AT3G27190 UKL2, uridine kinase-like 2 0.121 -0.056
57 254870_at AT4G11900 [S-locus lectin protein kinase family protein] 0.121 -0.031
58 251301_at AT3G61880 CYP78A9, cytochrome p450 78a9 0.121 -0.104
59 260086_at AT1G63240 unknown 0.120 -0.030
60 264096_at AT1G78995 unknown 0.119 -0.008
61 259956_at AT1G75110 RRA2, REDUCED RESIDUAL ARABINOSE 2 0.118 -0.104
62 263264_at AT2G38810 HTA8, histone H2A 8 0.117 0.004
63 253909_at AT4G27270 [Quinone reductase family protein] 0.116 -0.080
64 254817_at AT4G12460 ORP2B, OSBP(oxysterol binding protein)-related protein 2B 0.116 -0.054
65 251741_at AT3G56040 UGP3, UDP-glucose pyrophosphorylase 3 0.116 0.032
66 261056_at AT1G01360 PYL9, PYRABACTIN RESISTANCE 1-LIKE 9, RCAR1, regulatory component of ABA receptor 1 0.115 -0.028
67 254479_at AT4G20350 [oxidoreductases] 0.115 0.080
68 249639_at AT5G36930 [Disease resistance protein (TIR-NBS-LRR class) family] 0.114 0.068
69 257966_at AT3G19800 unknown 0.114 -0.064
70 264405_at AT1G10210 ATMPK1, mitogen-activated protein kinase 1, MPK1, mitogen-activated protein kinase 1 0.112 -0.106
71 259902_at AT1G74170 AtRLP13, receptor like protein 13, RLP13, receptor like protein 13 0.112 0.001
72 264435_at AT1G10360 ATGSTU18, glutathione S-transferase TAU 18, GST29, GLUTATHIONE S-TRANSFERASE 29, GSTU18, glutathione S-transferase TAU 18 0.112 -0.092
73 254415_at AT4G21326 ATSBT3.12, subtilase 3.12, SBT3.12, subtilase 3.12 0.112 0.004
74 261981_at AT1G33811 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.111 0.043
75 258326_at AT3G22760 SOL1 0.110 -0.100
76 259907_at AT1G60860 AGD2, ARF-GAP domain 2 0.108 0.076
77 261888_at AT1G80800 [pseudogene] 0.107 0.042
78 265720_at AT2G40110 [Yippee family putative zinc-binding protein] 0.107 -0.091
79 260364_at AT1G70560 CKRC1, cytokinin induced root curling 1, SAV3, SHADE AVOIDANCE 3, TAA1, tryptophan aminotransferase of Arabidopsis 1, WEI8, WEAK ETHYLENE INSENSITIVE 8 0.107 -0.023
80 266959_at AT2G07690 MCM5, MINICHROMOSOME MAINTENANCE 5 0.105 -0.005
81 257745_at AT3G29240 unknown 0.105 0.138
82 249542_at AT5G38140 NF-YC12, nuclear factor Y, subunit C12 0.105 -0.002
83 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 -0.904 0.145
84 263402_at AT2G04050 [MATE efflux family protein] -0.824 0.337
85 260522_x_at AT2G41730 unknown -0.813 0.330
86 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 -0.696 0.261
87 265668_at AT2G32020 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.686 0.313
88 264042_at AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 -0.625 0.273
89 245440_at AT4G16680 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.519 0.654
90 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 -0.461 0.363
91 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 -0.456 0.293
92 265197_at AT2G36750 UGT73C1, UDP-glucosyl transferase 73C1 -0.450 0.207
93 263515_at AT2G21640 unknown -0.443 0.439
94 261192_at AT1G32870 ANAC013, Arabidopsis NAC domain containing protein 13, ANAC13, NAC domain protein 13, NAC13, NAC domain protein 13 -0.386 0.312
95 266618_at AT2G35480 unknown -0.365 0.258
96 248434_at AT5G51440 [HSP20-like chaperones superfamily protein] -0.340 0.061
97 245999_at AT5G20650 COPT5, copper transporter 5 -0.330 -0.047
98 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 -0.309 0.128
99 256442_at AT3G10930 unknown -0.295 -0.044
100 251513_at AT3G59220 ATPIRIN1, PRN, pirin, PRN1 -0.293 -0.116
101 249125_at AT5G43450 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.291 0.611
102 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 -0.283 0.030
103 254010_at AT4G26240 unknown -0.274 0.009
104 263174_at AT1G54040 ESP, epithiospecifier protein, ESR, EPITHIOSPECIFYING SENESCENCE REGULATOR, TASTY -0.265 0.033
105 248253_at AT5G53290 CRF3, cytokinin response factor 3 -0.263 0.143
106 257401_at AT1G23550 SRO2, similar to RCD one 2 -0.254 0.120
107 264868_at AT1G24095 [Putative thiol-disulphide oxidoreductase DCC] -0.248 0.349
108 247431_at AT5G62520 SRO5, similar to RCD one 5 -0.244 -0.119
109 254200_at AT4G24110 unknown -0.241 0.018
110 254059_at AT4G25200 ATHSP23.6-MITO, mitochondrion-localized small heat shock protein 23.6, HSP23.6-MITO, mitochondrion-localized small heat shock protein 23.6 -0.238 -0.063
111 254603_at AT4G19045 [Mob1/phocein family protein] -0.231 -0.109
112 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 -0.231 0.101
113 264460_at AT1G10170 ATNFXL1, NF-X-like 1, NFXL1, NF-X-like 1 -0.225 0.269
114 244901_at ATMG00640 ORF25 -0.223 0.092
115 250479_at AT5G10260 AtRABH1e, RAB GTPase homolog H1E, RABH1e, RAB GTPase homolog H1E -0.222 -0.062
116 257271_at AT3G28007 AtSWEET4, SWEET4 -0.222 -0.053
117 267140_at AT2G38250 [Homeodomain-like superfamily protein] -0.217 0.261
118 262514_at AT1G34190 anac017, NAC domain containing protein 17, NAC017, NAC domain containing protein 17 -0.215 -0.001
119 258397_at AT3G15357 unknown -0.213 0.314
120 247287_at AT5G64230 unknown -0.212 0.081
121 266606_at AT2G46310 CRF5, cytokinin response factor 5 -0.199 -0.030
122 250907_at AT5G03670 TRM28, TON1 Recruiting Motif 28 -0.198 -0.128
123 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 -0.190 -0.193
124 261187_at AT1G32860 [Glycosyl hydrolase superfamily protein] -0.190 0.002
125 256725_at AT2G34070 TBL37, TRICHOME BIREFRINGENCE-LIKE 37 -0.188 -0.085
126 261240_at AT1G32940 ATSBT3.5, SBT3.5 -0.187 0.196
127 263061_at AT2G18190 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.182 -0.024
128 259913_at AT1G72660 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.175 -0.091
129 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 -0.175 0.115
130 256285_at AT3G12510 [MADS-box family protein] -0.172 -0.033
131 247447_at AT5G62730 [Major facilitator superfamily protein] -0.170 -0.051
132 246282_at AT4G36580 [AAA-type ATPase family protein] -0.169 0.495
133 250194_at AT5G14550 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] -0.168 -0.021
134 249068_at AT5G43980 PDLP1, plasmodesmata-located protein 1, PDLP1A, PLASMODESMATA-LOCATED PROTEIN 1A -0.168 -0.008
135 258805_at AT3G04010 [O-Glycosyl hydrolases family 17 protein] -0.168 -0.049
136 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 -0.168 -0.144
137 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 -0.165 -0.060
138 253824_at AT4G27940 ATMTM1, ARABIDOPSIS MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2, MTM1, manganese tracking factor for mitochondrial SOD2 -0.165 0.186
139 249494_at AT5G39050 PMAT1, phenolic glucoside malonyltransferase 1 -0.165 0.374
140 267246_at AT2G30250 ATWRKY25, WRKY25, WRKY DNA-binding protein 25 -0.165 0.098
141 251603_at AT3G57760 [Protein kinase superfamily protein] -0.164 0.055
142 262336_at AT1G64220 TOM7-2, translocase of outer membrane 7 kDa subunit 2 -0.163 0.501
143 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 -0.161 0.019
144 263614_at AT2G25240 AtCCP3, CCP3, conserved in ciliated species and in the land plants 3 -0.159 0.060
145 260415_at AT1G69790 [Protein kinase superfamily protein] -0.159 0.138
146 259222_at AT3G03680 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] -0.156 0.068
147 262836_at AT1G14680 unknown -0.155 0.052
148 256522_at AT1G66160 ATCMPG1, CMPG1, CYS, MET, PRO, and GLY protein 1 -0.155 -0.005
149 259626_at AT1G42990 ATBZIP60, basic region/leucine zipper motif 60, BZIP60, basic region/leucine zipper motif 60, BZIP60, Bbasic region/leucine zipper motif 60 -0.150 -0.003
150 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 -0.150 -0.114
151 263822_at AT2G40240 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.148 0.107
152 260438_at AT1G68290 ENDO2, endonuclease 2 -0.148 -0.009
153 264280_at AT1G61820 BGLU46, beta glucosidase 46 -0.147 -0.038
154 250821_at AT5G05190 unknown -0.147 -0.049
155 261261_at AT1G26730 [EXS (ERD1/XPR1/SYG1) family protein] -0.146 -0.187
156 255437_at AT4G03060 AOP2, alkenyl hydroxalkyl producing 2 -0.146 -0.326
157 248101_at AT5G55200 MGE1, mitochondrial GrpE 1 -0.145 0.182
158 266316_at AT2G27080 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.142 -0.017
159 262671_at AT1G76040 CPK29, calcium-dependent protein kinase 29 -0.141 -0.171
160 253405_at AT4G32800 [Integrase-type DNA-binding superfamily protein] -0.140 0.085
161 255811_at AT4G10250 ATHSP22.0 -0.139 -0.213
162 247933_at AT5G56980 unknown -0.139 0.052
163 247989_at AT5G56350 [Pyruvate kinase family protein] -0.132 0.098
164 261063_at AT1G07520 [GRAS family transcription factor] -0.132 -0.037