4.0:Information of module
hsfa2 KO
In comparison with siliques AtHb1 hypoxia help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019288 isopentenyl diphosphate biosynthetic pro... BP 3.146e-09
GO:0032506 cytokinetic process BP 3.734e-09
GO:1902410 mitotic cytokinetic process BP 3.734e-09
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 4.296e-05
GO:0022622 root system development BP 4.806e-05
GO:0048364 root development BP 4.806e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
hsfa2 KO		 Log2 signal ratio
siliques AtHb1 hypoxia
1 263174_at AT1G54040 ESP, epithiospecifier protein, ESR, EPITHIOSPECIFYING SENESCENCE REGULATOR, TASTY 0.891 0.004
2 253532_at AT4G31570 unknown 0.615 0.132
3 263285_at AT2G36120 DOT1, DEFECTIVELY ORGANIZED TRIBUTARIES 1 0.546 0.126
4 252618_at AT3G45140 ATLOX2, ARABIODOPSIS THALIANA LIPOXYGENASE 2, LOX2, lipoxygenase 2 0.506 -0.069
5 253411_at AT4G32980 ATH1, homeobox gene 1 0.503 -0.096
6 259686_at AT1G63100 [GRAS family transcription factor] 0.488 0.242
7 247717_at AT5G59320 LTP3, lipid transfer protein 3 0.447 -0.015
8 265053_at AT1G52000 [Mannose-binding lectin superfamily protein] 0.431 0.049
9 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.423 0.157
10 258859_at AT3G02120 [hydroxyproline-rich glycoprotein family protein] 0.419 0.298
11 254232_at AT4G23600 CORI3, CORONATINE INDUCED 1, JR2, JASMONIC ACID RESPONSIVE 2 0.414 0.261
12 262974_at AT1G75550 [glycine-rich protein] 0.403 -0.009
13 257679_at AT3G20470 ATGRP-5, ATGRP5, GRP-5, GLYCINE-RICH PROTEIN 5, GRP5, glycine-rich protein 5 0.398 -0.045
14 246920_at AT5G25090 AtENODL13, ENODL13, early nodulin-like protein 13 0.379 0.099
15 251886_at AT3G54260 TBL36, TRICHOME BIREFRINGENCE-LIKE 36 0.378 0.095
16 258414_at AT3G17380 [TRAF-like family protein] 0.376 -0.098
17 248807_at AT5G47500 PME5, pectin methylesterase 5 0.365 -0.019
18 261333_at AT1G44910 ATPRP40A, pre-mRNA-processing protein 40A, PRP40A, pre-mRNA-processing protein 40A 0.361 0.336
19 261431_at AT1G18710 AtMYB47, myb domain protein 47, MYB47, myb domain protein 47 0.354 0.088
20 254208_at AT4G24175 unknown 0.351 0.152
21 252208_at AT3G50380 [INVOLVED IN: protein localization] 0.349 0.113
22 258471_at AT3G06030 ANP3, NPK1-related protein kinase 3, AtANP3, MAPKKK12, NP3, NPK1-related protein kinase 3 0.328 0.109
23 264698_at AT1G70200 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.327 0.271
24 257724_at AT3G18510 unknown 0.324 0.187
25 260230_at AT1G74500 ATBS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, bHLH135, basic helix-loop-helix protein 135, BS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, PRE3, PACLOBUTRAZOL RESISTANCE 3, TMO7, TARGET OF MONOPTEROS 7 0.322 -0.054
26 267645_at AT2G32860 BGLU33, beta glucosidase 33 0.310 -0.249
27 258618_at AT3G02885 GASA5, GAST1 protein homolog 5 0.307 -0.080
28 249916_at AT5G22880 H2B, HISTONE H2B, HTB2, histone B2 0.306 0.110
29 249948_at AT5G19210 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.288 -0.086
30 266951_at AT2G18940 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.284 -0.023
31 248709_at AT5G48470 PRDA1, PEP-Related Development Arrested 1 0.282 0.086
32 262242_at AT1G48360 [zinc ion binding] 0.281 0.136
33 247959_at AT5G57080 unknown 0.281 0.097
34 248291_at AT5G53020 [Ribonuclease P protein subunit P38-related] 0.281 0.120
35 263864_at AT2G04530 CPZ, TRZ2, TRNASE Z 2 0.276 -0.040
36 250529_at AT5G08610 PDE340, PIGMENT DEFECTIVE 340 0.275 0.201
37 265522_at AT2G06210 ELF8, EARLY FLOWERING 8, VIP6, VERNALIZATION INDEPENDENCE 6 0.273 0.148
38 247425_at AT5G62550 unknown 0.270 0.203
39 265831_at AT2G14460 unknown 0.269 0.109
40 247235_at AT5G64580 EMB3144, EMBRYO DEFECTIVE 3144 0.268 0.072
41 258034_at AT3G21300 [RNA methyltransferase family protein] 0.267 0.034
42 263535_at AT2G24970 unknown 0.261 0.076
43 249852_at AT5G23270 ATSTP11, SUGAR TRANSPORTER 11, STP11, sugar transporter 11 0.259 -0.023
44 262109_at AT1G02730 ATCSLD5, cellulose synthase-like D5, CSLD5, CELLULOSE SYNTHASE LIKE D5, CSLD5, cellulose synthase-like D5, SOS6, SALT OVERLY SENSITIVE 6 0.259 0.078
45 253078_at AT4G36180 [Leucine-rich receptor-like protein kinase family protein] 0.257 0.123
46 256125_at AT1G18250 ATLP-1 0.252 0.055
47 247550_at AT5G61370 [Pentatricopeptide repeat (PPR) superfamily protein] 0.250 0.045
48 260204_at AT1G52900 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.248 -0.080
49 261521_at AT1G71830 ATSERK1, SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1, SERK1, somatic embryogenesis receptor-like kinase 1 0.248 0.166
50 245461_at AT4G17000 unknown 0.247 0.130
51 252522_at AT3G46390 unknown 0.247 0.021
52 245847_at AT5G11050 AtMYB64, myb domain protein 64, MYB64, myb domain protein 64, URP10, UAS-TAGGED ROOT PATTERNING10 0.247 -0.047
53 259290_at AT3G11520 CYC2, CYCLIN 2, CYCB1;3, CYCLIN B1;3 0.245 0.073
54 266618_at AT2G35480 unknown 0.244 0.040
55 248139_at AT5G54970 unknown 0.242 0.026
56 246746_at AT5G27820 [Ribosomal L18p/L5e family protein] 0.238 0.011
57 248708_at AT5G48560 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.238 -0.137
58 264091_at AT1G79110 BRG2, BOI-related gene 2 0.237 -0.030
59 247594_at AT5G60800 [Heavy metal transport/detoxification superfamily protein ] 0.237 0.190
60 251650_at AT3G57360 unknown 0.237 0.101
61 256302_at AT1G69526 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.234 0.081
62 265596_at AT2G20020 ATCAF1, CAF1 0.234 0.158
63 262693_at AT1G62780 unknown 0.233 -0.025
64 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] 0.232 0.022
65 255236_at AT4G05520 ATEHD2, EPS15 homology domain 2, EHD2, EPS15 homology domain 2 0.230 0.073
66 254662_at AT4G18270 ATTRANS11, ARABIDOPSIS THALIANA TRANSLOCASE 11, TRANS11, translocase 11 0.229 -0.121
67 254639_at AT4G18750 DOT4, DEFECTIVELY ORGANIZED TRIBUTARIES 4 0.227 0.045
68 247951_at AT5G57240 ORP4C, OSBP(oxysterol binding protein)-related protein 4C -0.673 0.152
69 257264_at AT3G22060 [Receptor-like protein kinase-related family protein] -0.666 0.079
70 263890_at AT2G37030 SAUR46, SMALL AUXIN UPREGULATED RNA 46 -0.645 -0.078
71 244932_at ATCG01060 PSAC -0.622 -0.024
72 250135_at AT5G15360 unknown -0.606 -0.089
73 245757_at AT1G35140 EXL1, EXORDIUM like 1, PHI-1, PHOSPHATE-INDUCED 1 -0.606 0.010
74 250098_at AT5G17350 unknown -0.575 -0.025
75 245460_at AT4G16990 RLM3, RESISTANCE TO LEPTOSPHAERIA MACULANS 3 -0.569 -0.133
76 253284_at AT4G34150 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.549 -0.130
77 266019_at AT2G18750 [Calmodulin-binding protein] -0.534 -0.159
78 248371_at AT5G51810 AT2353, ATGA20OX2, GA20OX2, gibberellin 20 oxidase 2 -0.514 -0.068
79 254169_at AT4G24290 [MAC/Perforin domain-containing protein] -0.492 -0.148
80 245290_at AT4G16490 [ARM repeat superfamily protein] -0.484 -0.204
81 253794_at AT4G28720 YUC8, YUCCA 8 -0.473 -0.055
82 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 -0.471 -0.110
83 258282_at AT3G26910 [hydroxyproline-rich glycoprotein family protein] -0.466 0.129
84 251829_at AT3G55020 [Ypt/Rab-GAP domain of gyp1p superfamily protein] -0.456 -0.242
85 245528_at AT4G15530 PPDK, pyruvate orthophosphate dikinase -0.453 -0.042
86 247474_at AT5G62280 unknown -0.449 0.007
87 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 -0.448 0.117
88 256968_at AT3G21070 ATNADK-1, NAD KINASE 1, NADK1, NAD kinase 1 -0.440 -0.109
89 250657_at AT5G07000 ATST2B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2B, ST2B, sulfotransferase 2B -0.408 -0.204
90 251842_at AT3G54580 [Proline-rich extensin-like family protein] -0.387 -0.448
91 262719_at AT1G43590 unknown -0.384 0.060
92 255015_at AT4G09980 EMB1691, EMBRYO DEFECTIVE 1691 -0.369 -0.138
93 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 -0.369 -0.022
94 263614_at AT2G25240 AtCCP3, CCP3, conserved in ciliated species and in the land plants 3 -0.361 -0.107
95 253925_at AT4G26690 GDPDL3, Glycerophosphodiester phosphodiesterase (GDPD) like 3, GPDL2, GLYCEROPHOSPHODIESTERASE-LIKE 2, MRH5, MUTANT ROOT HAIR 5, SHV3, SHAVEN 3 -0.360 -0.167
96 254572_at AT4G19380 [Long-chain fatty alcohol dehydrogenase family protein] -0.357 0.060
97 263163_at AT1G03160 FZL, FZO-like -0.355 -0.144
98 250939_at AT5G03040 iqd2, IQ-domain 2 -0.355 -0.219
99 253437_at AT4G32460 unknown -0.345 -0.038
100 257690_at AT3G12830 SAUR72, SMALL AUXIN UPREGULATED 72 -0.344 -0.006
101 248756_at AT5G47560 ATSDAT, ATTDT, TONOPLAST DICARBOXYLATE TRANSPORTER, TDT, tonoplast dicarboxylate transporter -0.335 -0.026
102 260642_at AT1G53260 [LOCATED IN: endomembrane system] -0.327 -0.082
103 251187_at AT3G62770 AtATG18a, autophagy 18a, ATG18a, autophagy 18a, PEUP2, PEROXISOME UNUSUAL POSITIONING 2 -0.326 -0.109
104 258985_at AT3G08960 [ARM repeat superfamily protein] -0.325 -0.205
105 265823_at AT2G35760 [Uncharacterised protein family (UPF0497)] -0.324 -0.078
106 263806_at AT2G04305 [Magnesium transporter CorA-like family protein] -0.322 -0.162
107 251200_at AT3G63010 ATGID1B, GID1B, GA INSENSITIVE DWARF1B -0.320 -0.107
108 250231_at AT5G13910 LEP, LEAFY PETIOLE -0.309 -0.122
109 246284_at AT4G36780 BEH2, BES1/BZR1 homolog 2 -0.306 -0.184
110 267019_at AT2G39130 [Transmembrane amino acid transporter family protein] -0.302 -0.221
111 265573_at AT2G28200 [C2H2-type zinc finger family protein] -0.293 -0.024
112 246935_at AT5G25350 EBF2, EIN3-binding F box protein 2 -0.292 -0.190
113 267069_at AT2G41010 ATCAMBP25, calmodulin (CAM)-binding protein of 25 kDa, CAMBP25, calmodulin (CAM)-binding protein of 25 kDa -0.289 -0.008
114 249232_at AT5G42080 ADL1, dynamin-like protein, ADL1A, AG68, DL1, dynamin-like protein, DRP1A, DYNAMIN-RELATED PROTEIN 1A, RSW9, RADIAL SWELLING 9 -0.276 -0.044
115 251144_at AT5G01210 [HXXXD-type acyl-transferase family protein] -0.275 -0.109
116 246495_at AT5G16200 [50S ribosomal protein-related] -0.271 0.088
117 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 -0.264 -0.063
118 257851_at AT3G12940 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.260 -0.045
119 261405_at AT1G18740 unknown -0.258 0.038
120 255635_at AT4G00720 ASKTHETA, SHAGGY-LIKE PROTEIN KINASE THETA, ATSK32, shaggy-like protein kinase 32, SK32, shaggy-like protein kinase 32 -0.257 -0.020
121 255818_at AT2G33570 GALS1, galactan synthase 1 -0.247 -0.125
122 267062_at AT2G32600 [hydroxyproline-rich glycoprotein family protein] -0.246 0.099
123 251404_at AT3G60310 unknown -0.246 -0.062
124 251861_at AT3G54810 BME3, BLUE MICROPYLAR END 3, BME3-ZF, BLUE MICROPYLAR END 3-ZINC FINGER, GATA8, GATA TRANSCRIPTION FACTOR 8 -0.246 -0.052
125 248423_at AT5G51670 unknown -0.242 -0.002
126 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 -0.242 -0.046
127 254041_at AT4G25830 [Uncharacterised protein family (UPF0497)] -0.239 -0.046
128 262915_at AT1G59940 ARR3, response regulator 3 -0.237 -0.064
129 246144_at AT5G20110 [Dynein light chain type 1 family protein] -0.234 -0.025
130 257018_at AT3G19630 [Radical SAM superfamily protein] -0.233 -0.049
131 265011_at AT1G24490 ALB4, ALBINA 4, ARTEMIS, ARABIDOPSIS THALIANA ENVELOPE MEMBRANE INTEGRASE -0.229 -0.025
132 266240_at AT2G29580 MAC5B, MOS4-associated complex subunit 5B -0.228 -0.042
133 255309_at AT4G04920 AtSFR6, IEN1, INSENSITIVE TO EXOGENOUS NAD+ 1, MED16, MEDIATOR 16, SFR6, SENSITIVE TO FREEZING 6, YID1, YELLOW AND SENSITIVE TO IRON-DEFICIENCY 1 -0.227 -0.031