4.0:Information of module
vte2-1 1d vernalization
In comparison with root stele -S help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019684 photosynthesis, light reaction BP 4.958e-07
GO:0006811 ion transport BP 5.648e-06
GO:0015979 photosynthesis BP 1.192e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0007276 gamete generation BP 2.437e-04
GO:0019953 sexual reproduction BP 5.598e-04
GO:0022412 cellular process involved in reproductio... BP 6.419e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
vte2-1 1d vernalization		 Log2 signal ratio
root stele -S
1 267026_at AT2G38340 DREB19, dehydration response element-binding protein 19 0.820 -0.293
2 261135_at AT1G19610 LCR78, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 0.799 0.055
3 249456_at AT5G39410 [Saccharopine dehydrogenase ] 0.633 -0.080
4 246099_at AT5G20230 ATBCB, blue-copper-binding protein, BCB, BLUE COPPER BINDING PROTEIN, BCB, blue-copper-binding protein, SAG14, SENESCENCE ASSOCIATED GENE 14 0.587 -0.069
5 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 0.517 0.121
6 256442_at AT3G10930 unknown 0.517 -0.344
7 256576_at AT3G28210 PMZ, SAP12, STRESS-ASSOCIATED PROTEIN 12 0.509 -0.166
8 249894_at AT5G22580 [Stress responsive A/B Barrel Domain] 0.506 0.463
9 246018_at AT5G10695 unknown 0.434 -0.162
10 252076_at AT3G51660 [Tautomerase/MIF superfamily protein] 0.419 -0.291
11 261586_at AT1G01640 [BTB/POZ domain-containing protein] 0.418 -0.698
12 251513_at AT3G59220 ATPIRIN1, PRN, pirin, PRN1 0.406 -0.177
13 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.392 0.003
14 248332_at AT5G52640 ATHS83, AtHsp90-1, HEAT SHOCK PROTEIN 90-1, ATHSP90.1, heat shock protein 90.1, HSP81-1, HEAT SHOCK PROTEIN 81-1, HSP81.1, HSP83, HEAT SHOCK PROTEIN 83, HSP90.1, heat shock protein 90.1 0.377 -0.049
15 262085_at AT1G56060 unknown 0.369 -0.250
16 260744_at AT1G15010 unknown 0.332 -0.257
17 250365_at AT5G11410 [Protein kinase superfamily protein] 0.325 0.015
18 264774_at AT1G22890 unknown 0.322 -0.227
19 248683_at AT5G48490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.297 0.089
20 247317_at AT5G64060 anac103, NAC domain containing protein 103, NAC103, NAC domain containing protein 103 0.278 0.008
21 258133_at AT3G24500 ATMBF1C, MBF1C, multiprotein bridging factor 1C 0.272 -0.504
22 266290_at AT2G29490 ATGSTU1, glutathione S-transferase TAU 1, GST19, GLUTATHIONE S-TRANSFERASE 19, GSTU1, glutathione S-transferase TAU 1 0.270 -0.118
23 266938_at AT2G18950 ATHPT, HOMOGENTISATE PHYTYLTRANSFERASE, HPT1, homogentisate phytyltransferase 1, TPT1, VTE2, VITAMIN E 2 -0.372 0.116
24 254203_at AT4G24150 AtGRF8, growth-regulating factor 8, GRF8, growth-regulating factor 8 -0.340 0.076
25 257765_at AT3G23020 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.277 0.176
26 266246_at AT2G27690 CYP94C1, cytochrome P450, family 94, subfamily C, polypeptide 1 -0.263 0.241
27 257685_at AT3G12770 MEF22, mitochondrial editing factor 22 -0.238 0.537
28 252455_at AT3G47140 [F-box associated ubiquitination effector family protein] -0.232 0.056
29 247501_at AT5G61920 FLL4, FLOWERING LOCUS C EXPRESSOR-LIKE 4, FLX4, FLX LIKE 4 -0.215 0.146
30 249028_at AT5G44740 POLH, Y-family DNA polymerase H -0.210 0.149
31 265147_at AT1G51380 [DEA(D/H)-box RNA helicase family protein] -0.197 0.387
32 254449_at AT4G20910 CRM2, CORYMBOSA 2, HEN1, HUA ENHANCER 1 -0.196 0.342
33 251754_at AT3G55780 [Glycosyl hydrolase superfamily protein] -0.195 0.069
34 252698_at AT3G43670 [Copper amine oxidase family protein] -0.180 -0.166
35 259444_at AT1G02370 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.173 0.647
36 256325_at AT3G02330 [Pentatricopeptide repeat (PPR) superfamily protein] -0.159 0.274
37 264119_at AT1G79180 ATMYB63, MYB DOMAIN PROTEIN 63, MYB63, myb domain protein 63 -0.159 -0.370
38 253675_at AT4G29560 unknown -0.159 0.116
39 258626_at AT3G04450 [Homeodomain-like superfamily protein] -0.158 0.052
40 260224_at AT1G74400 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.157 0.194
41 245559_at AT4G15460 [glycine-rich protein] -0.155 0.086
42 256230_at AT3G12340 [FKBP-like peptidyl-prolyl cis-trans isomerase family protein] -0.154 0.470
43 262586_at AT1G15480 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.152 0.579