4.0:Information of module
A. halleri highZn-root
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010087 phloem or xylem histogenesis BP 3.013e-04
GO:0010089 xylem development BP 3.890e-04
GO:0007166 cell surface receptor signaling pathway BP 7.249e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009911 positive regulation of flower developmen... BP 6.704e-04
GO:2000243 positive regulation of reproductive proc... BP 1.551e-03
GO:0009967 positive regulation of signal transducti... BP 4.167e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
A. halleri highZn-root		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 263599_at AT2G01830 AHK4, ARABIDOPSIS HISTIDINE KINASE 4, ATCRE1, CRE1, CYTOKININ RESPONSE 1, WOL, WOODEN LEG, WOL1, WOODEN LEG 1 0.451 0.098
2 263875_at AT2G21970 SEP2, stress enhanced protein 2 0.388 0.085
3 258950_at AT3G01460 ATMBD9, MBD9, methyl-CPG-binding domain 9 0.313 0.010
4 251447_at AT3G59810 LSM6A, SM-like 6A 0.288 -0.176
5 260034_at AT1G68810 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.288 0.093
6 266770_at AT2G03090 ATEXP15, ATEXPA15, expansin A15, ATHEXP ALPHA 1.3, EXP15, EXPANSIN 15, EXPA15, expansin A15 0.279 0.137
7 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] 0.276 0.022
8 266635_at AT2G35470 unknown 0.271 0.184
9 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 0.264 0.176
10 261347_at AT1G79730 ELF7, EARLY FLOWERING 7 0.238 -0.243
11 255230_at AT4G05390 ATRFNR1, root FNR 1, RFNR1, root FNR 1 0.235 0.097
12 262602_at AT1G15270 [Translation machinery associated TMA7] 0.233 0.100
13 258945_at AT3G10660 ATCPK2, CPK2, calmodulin-domain protein kinase cdpk isoform 2 0.228 0.081
14 249973_at AT5G19130 [GPI transamidase component family protein / Gaa1-like family protein] 0.222 0.095
15 265734_at AT2G01260 unknown 0.215 0.010
16 266824_at AT2G22800 HAT9 0.214 -0.124
17 261382_at AT1G05470 CVP2, COTYLEDON VASCULAR PATTERN 2 0.212 -0.143
18 250434_at AT5G10390 H3.1, histone 3.1 0.205 -0.137
19 265226_at AT2G28430 unknown 0.201 -0.014
20 264897_at AT1G23220 [Dynein light chain type 1 family protein] 0.198 0.086
21 253402_at AT4G32880 ATHB-8, homeobox gene 8, ATHB8, HB-8, homeobox gene 8 0.196 0.038
22 266221_at AT2G28760 UXS6, UDP-XYL synthase 6 0.192 0.039
23 245961_at AT5G19670 [Exostosin family protein] 0.189 -0.210
24 248154_at AT5G54400 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.188 0.031
25 255855_at AT1G66950 ABCG39, ATP-binding cassette G39, ATPDR11, PLEIOTROPIC DRUG RESISTANCE 11, PDR11, pleiotropic drug resistance 11 -0.327 0.178
26 266258_at AT2G27720 [60S acidic ribosomal protein family] -0.310 -0.238
27 246136_at AT5G28470 [Major facilitator superfamily protein] -0.271 0.027
28 253493_at AT4G31820 ENP, ENHANCER OF PINOID, MAB4, MACCHI-BOU 4, NPY1, NAKED PINS IN YUC MUTANTS 1 -0.255 0.050
29 256097_at AT1G13670 unknown -0.226 -0.581
30 259849_at AT1G72190 [D-isomer specific 2-hydroxyacid dehydrogenase family protein] -0.197 0.008
31 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] -0.194 -0.607
32 265862_at AT2G01780 [Curculin-like (mannose-binding) lectin family protein] -0.189 0.088
33 250226_at AT5G13780 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.180 -0.080
34 260631_at AT1G62350 [Pentatricopeptide repeat (PPR) superfamily protein] -0.179 0.104
35 265070_at AT1G55510 BCDH BETA1, branched-chain alpha-keto acid decarboxylase E1 beta subunit -0.179 0.231
36 267246_at AT2G30250 ATWRKY25, WRKY25, WRKY DNA-binding protein 25 -0.175 0.128
37 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 -0.172 0.040
38 263769_at AT2G06390 transposable element gene -0.169 -0.081
39 260709_at AT1G32500 ABCI7, ATP-binding cassette I7, ATNAP6, non-intrinsic ABC protein 6, NAP6, non-intrinsic ABC protein 6 -0.165 -0.012
40 266860_at AT2G26870 NPC2, non-specific phospholipase C2 -0.154 0.029
41 251236_at AT3G62380 unknown -0.146 -0.155
42 246779_at AT5G27520 AtPNC2, PNC2, peroxisomal adenine nucleotide carrier 2 -0.144 0.005
43 265123_at AT1G55440 [Cysteine/Histidine-rich C1 domain family protein] -0.143 0.019
44 267301_at AT2G30110 ATUBA1, ubiquitin-activating enzyme 1, MOS5, MODIFIER OF SNC1 5, UBA1, ubiquitin-activating enzyme 1 -0.141 0.086
45 259325_at AT3G05320 [O-fucosyltransferase family protein] -0.140 -0.145
46 255731_at AT1G25490 ATB BETA BETA, EER1, ENHANCED ETHYLENE RESPONSE 1, RCN1, ROOTS CURL IN NPA, REGA -0.133 0.011
47 259025_at AT3G33073 transposable element gene -0.127 0.173