4.0:Information of module
camta1-2
In comparison with Red/FR Light 4 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 1.059e-19
GO:0010033 response to organic substance BP 2.494e-13
GO:0042221 response to chemical BP 8.013e-13
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009220 pyrimidine ribonucleotide biosynthetic p... BP 1.228e-13
GO:0001510 RNA methylation BP 1.558e-13
GO:0006220 pyrimidine nucleotide metabolic process BP 2.709e-13
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
camta1-2		 Log2 signal ratio
Red/FR Light 4 h
1 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 0.563 0.067
2 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.459 0.292
3 262552_at AT1G31350 KUF1, KAR-UP F-box 1 0.399 -0.074
4 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 0.381 0.022
5 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 0.373 0.031
6 256337_at AT1G72060 [serine-type endopeptidase inhibitors] 0.332 0.093
7 261873_at AT1G11350 CBRLK1, CALMODULIN-BINDING RECEPTOR-LIKE PROTEIN KINASE, RKS2, SD1-13, S-domain-1 13 0.326 0.066
8 254652_at AT4G18170 ATWRKY28, WRKY28, WRKY DNA-binding protein 28 0.316 -0.008
9 252173_at AT3G50650 [GRAS family transcription factor] 0.299 0.054
10 252126_at AT3G50950 ZAR1, HOPZ-ACTIVATED RESISTANCE 1 0.271 0.031
11 259466_at AT1G19050 ARR7, response regulator 7 0.253 0.091
12 260312_at AT1G63880 [Disease resistance protein (TIR-NBS-LRR class) family] 0.250 0.065
13 253993_at AT4G26070 ATMEK1, MEK1, MAP kinase/ ERK kinase 1, MKK1, MITOGEN ACTIVATED PROTEIN KINASE KINASE 1, NMAPKK 0.247 0.021
14 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 0.238 0.008
15 266175_at AT2G02450 ANAC034, Arabidopsis NAC domain containing protein 34, ANAC035, NAC domain containing protein 35, AtLOV1, LOV1, LONG VEGETATIVE PHASE 1, NAC035, NAC domain containing protein 35 0.237 0.033
16 267550_at AT2G32800 AP4.3A, LecRK-S.2, L-type lectin receptor kinase S.2 0.235 0.089
17 258507_at AT3G06500 A/N-InvC, alkaline/neutral invertase C 0.218 0.070
18 258650_at AT3G09830 [Protein kinase superfamily protein] 0.216 0.053
19 253827_at AT4G28085 unknown 0.206 0.125
20 262412_at AT1G34760 GF14 OMICRON, GRF11, general regulatory factor 11, RHS5, ROOT HAIR SPECIFIC 5 0.202 0.158
21 263457_at AT2G22300 CAMTA3, CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3, SR1, signal responsive 1 0.198 -0.019
22 249127_at AT5G43500 ARP9, actin-related protein 9, ATARP9, actin-related protein 9 0.192 0.078
23 247940_at AT5G57190 PSD2, phosphatidylserine decarboxylase 2 0.182 0.044
24 251684_at AT3G56410 unknown 0.178 0.035
25 263981_at AT2G42870 HLH1, HELIX-LOOP-HELIX 1, PAR1, PHY RAPIDLY REGULATED 1 0.174 0.181
26 264624_at AT1G08930 ERD6, EARLY RESPONSE TO DEHYDRATION 6 0.172 0.037
27 252415_at AT3G47340 ASN1, glutamine-dependent asparagine synthase 1, AT-ASN1, ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1, DIN6, DARK INDUCIBLE 6 0.171 0.155
28 266019_at AT2G18750 [Calmodulin-binding protein] 0.170 0.067
29 251109_at AT5G01600 ATFER1, ARABIDOPSIS THALIANA FERRETIN 1, FER1, ferretin 1 0.167 -0.056
30 245768_at AT1G33590 [Leucine-rich repeat (LRR) family protein] 0.164 0.056
31 249284_at AT5G41810 unknown 0.164 0.071
32 260881_at AT1G21550 [Calcium-binding EF-hand family protein] 0.162 0.009
33 247126_at AT5G66080 APD9, Arabidopsis Pp2c clade D 9 0.162 0.096
34 251402_at AT3G60290 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.161 0.040
35 245244_at AT1G44350 ILL6, IAA-leucine resistant (ILR)-like gene 6 0.161 0.105
36 267083_at AT2G41100 ATCAL4, ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TCH3, TOUCH 3 0.159 0.077
37 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 0.158 0.007
38 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] 0.156 0.077
39 245765_at AT1G33600 [Leucine-rich repeat (LRR) family protein] 0.156 -0.005
40 254032_at AT4G25940 [ENTH/ANTH/VHS superfamily protein] 0.155 0.134
41 253414_at AT4G33050 AtIQM1, EDA39, embryo sac development arrest 39, IQM1, IQ-motif protein 1 0.153 0.075
42 258282_at AT3G26910 [hydroxyproline-rich glycoprotein family protein] 0.153 0.028
43 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 0.151 0.080
44 252422_at AT3G47550 [RING/FYVE/PHD zinc finger superfamily protein] 0.149 0.021
45 256567_at AT3G19553 PUT5, POLYAMINE UPTAKE TRANSPORTER 5 0.148 0.044
46 267392_at AT2G44490 BGLU26, BETA GLUCOSIDASE 26, PEN2, PENETRATION 2 0.147 0.025
47 255723_at AT3G29575 AFP3, ABI five binding protein 3 0.145 -0.078
48 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.144 0.085
49 250582_at AT5G07580 [Integrase-type DNA-binding superfamily protein] 0.142 0.045
50 262711_at AT1G16500 unknown 0.139 0.024
51 259272_at AT3G01290 AtHIR2, HIR2, hypersensitive induced reaction 2 0.138 0.007
52 265245_at AT2G43060 AtIBH1, IBH1, ILI1 binding bHLH 1 0.137 0.027
53 263461_at AT2G31800 [Integrin-linked protein kinase family] 0.137 -0.007
54 245050_at ATCG00070 PSBK, photosystem II reaction center protein K precursor 0.136 -0.031
55 260486_at AT1G51550 [Kelch repeat-containing F-box family protein] 0.136 0.008
56 266069_at AT2G18650 MEE16, maternal effect embryo arrest 16 0.136 0.012
57 245642_at AT1G25275 unknown 0.136 0.006
58 250777_at AT5G05440 PYL5, PYRABACTIN RESISTANCE 1-LIKE 5, RCAR8, regulatory component of ABA receptor 8 0.134 0.098
59 267503_at AT2G45600 [alpha/beta-Hydrolases superfamily protein] 0.134 -0.030
60 256622_at AT3G28920 AtHB34, homeobox protein 34, HB34, homeobox protein 34, ZHD9, ZINC FINGER HOMEODOMAIN 9 0.134 0.137
61 252183_at AT3G50740 UGT72E1, UDP-glucosyl transferase 72E1 0.133 0.000
62 257516_at AT1G69040 ACR4, ACT domain repeat 4 0.131 0.237
63 261101_at AT1G63030 ddf2, DWARF AND DELAYED FLOWERING 2 0.130 -0.027
64 265481_at AT2G15960 unknown 0.129 0.009
65 251039_at AT5G02020 SIS, Salt Induced Serine rich 0.129 0.104
66 250289_at AT5G13190 AtGILP, GILP, GSH-induced LITAF domain protein 0.129 -0.001
67 260401_at AT1G69840 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 0.127 0.022
68 255866_at AT2G30350 [Excinuclease ABC, C subunit, N-terminal] 0.126 0.015
69 247043_at AT5G66880 SNRK2-3, SUCROSE NONFERMENTING 1 (SNF1)-RELATED PROTEIN KINASE 2-3, SNRK2.3, sucrose nonfermenting 1(SNF1)-related protein kinase 2.3, SRK2I 0.125 0.085
70 253637_at AT4G30390 unknown 0.123 0.023
71 252317_at AT3G48720 DCF, DEFICIENT IN CUTIN FERULATE 0.123 -0.030
72 253666_at AT4G30270 MERI-5, MERISTEM 5, MERI5B, meristem-5, SEN4, SENESCENCE 4, XTH24, xyloglucan endotransglucosylase/hydrolase 24 0.122 0.001
73 253804_at AT4G28230 unknown 0.121 -0.002
74 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.907 -0.044
75 265665_at AT2G27420 [Cysteine proteinases superfamily protein] -0.674 -0.378
76 246001_at AT5G20790 unknown -0.549 -0.223
77 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.532 -0.017
78 257421_at AT1G12030 unknown -0.515 0.019
79 256619_at AT3G24460 [Serinc-domain containing serine and sphingolipid biosynthesis protein] -0.515 0.029
80 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.461 -0.745
81 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 -0.461 0.009
82 249191_at AT5G42760 [Leucine carboxyl methyltransferase] -0.435 -0.672
83 252010_at AT3G52740 unknown -0.391 -0.575
84 252661_at AT3G44450 unknown -0.385 -0.614
85 255284_at AT4G04610 APR, APR1, APS reductase 1, ATAPR1, PRH19, PAPS REDUCTASE HOMOLOG 19 -0.361 0.015
86 264909_at AT2G17300 unknown -0.358 0.032
87 264898_at AT1G23205 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.355 -0.157
88 260955_at AT1G06000 [UDP-Glycosyltransferase superfamily protein] -0.341 -0.316
89 261914_at AT1G65870 [Disease resistance-responsive (dirigent-like protein) family protein] -0.327 0.044
90 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 -0.322 -0.087
91 250794_at AT5G05270 AtCHIL, CHIL, chalcone isomerase like -0.306 -0.619
92 259348_at AT3G03770 [Leucine-rich repeat protein kinase family protein] -0.298 -0.102
93 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 -0.285 -0.203
94 246932_at AT5G25190 ESE3, ethylene and salt inducible 3 -0.283 0.037
95 250049_at AT5G17780 [alpha/beta-Hydrolases superfamily protein] -0.280 -0.210
96 246597_at AT5G14760 AO, L-aspartate oxidase, FIN4, FLAGELLIN-INSENSITIVE 4 -0.276 -0.284
97 253946_at AT4G26790 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.271 -0.078
98 254683_at AT4G13800 unknown -0.265 0.031
99 266253_at AT2G27840 HD2D, histone deacetylase 2D, HDA13, HISTONE DEACETYLASE 13, HDT04, HDT4 -0.262 0.010
100 254744_at AT4G13345 MEE55, maternal effect embryo arrest 55 -0.261 -0.029
101 247055_at AT5G66740 unknown -0.260 0.008
102 250478_at AT5G10250 DOT3, DEFECTIVELY ORGANIZED TRIBUTARIES 3 -0.260 0.008
103 252073_at AT3G51750 unknown -0.255 -0.302
104 253835_at AT4G27820 BGLU9, beta glucosidase 9 -0.245 -0.291
105 258396_at AT3G15460 [Ribosomal RNA processing Brix domain protein] -0.242 -0.001
106 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 -0.234 -0.141
107 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase -0.231 -0.102
108 264745_at AT1G62180 5'adenylylphosphosulfate reductase 2 -0.230 -0.067
109 249063_at AT5G44110 ABCI21, ATP-binding cassette A21, ATNAP2, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN, ATPOP1, POP1 -0.221 -0.644
110 260070_at AT1G73830 BEE3, BR enhanced expression 3 -0.220 -0.044
111 265121_at AT1G62560 FMO GS-OX3, flavin-monooxygenase glucosinolate S-oxygenase 3 -0.209 0.037
112 256379_at AT1G66840 PMI2, plastid movement impaired 2, WEB2, WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 -0.207 -0.258
113 251476_at AT3G59670 unknown -0.204 -0.053
114 247760_at AT5G59130 [Subtilase family protein] -0.199 0.070
115 252363_at AT3G48460 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.197 -0.026
116 257793_at AT3G26960 [Pollen Ole e 1 allergen and extensin family protein] -0.197 -0.090
117 254430_at AT4G20820 [FAD-binding Berberine family protein] -0.196 -0.115
118 254076_at AT4G25340 ATFKBP53, FKBP53, FK506 BINDING PROTEIN 53 -0.195 -0.047
119 254056_at AT4G25250 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.189 0.011
120 258167_at AT3G21560 BRT1, Bright Trichomes 1, UGT84A2, UDP-glucosyl transferase 84A2 -0.186 -0.520
121 263847_at AT2G36970 [UDP-Glycosyltransferase superfamily protein] -0.185 -0.066
122 252193_at AT3G50060 MYB77, myb domain protein 77 -0.182 0.039
123 258349_at AT3G17609 HYH, HY5-homolog -0.179 -0.801
124 260331_at AT1G80270 PPR596, PENTATRICOPEPTIDE REPEAT 596 -0.179 -0.027
125 267089_at AT2G38300 [myb-like HTH transcriptional regulator family protein] -0.179 0.022
126 252343_at AT3G48610 NPC6, non-specific phospholipase C6 -0.179 -0.046
127 251020_at AT5G02270 ABCI20, ATP-binding cassette I20, ATNAP9, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 9, NAP9, non-intrinsic ABC protein 9 -0.176 -0.550
128 248961_at AT5G45650 [subtilase family protein] -0.176 -0.021
129 251827_at AT3G55120 A11, AtCHI, CFI, CHALCONE FLAVANONE ISOMERASE, CHI, chalcone isomerase, TT5, TRANSPARENT TESTA 5 -0.176 -0.281
130 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 -0.175 0.028
131 247486_at AT5G62140 unknown -0.174 -0.161
132 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI -0.169 0.002
133 253097_at AT4G37320 CYP81D5, cytochrome P450, family 81, subfamily D, polypeptide 5 -0.169 -0.076
134 255874_at AT2G40550 ETG1, E2F target gene 1 -0.169 0.018
135 258252_at AT3G15720 [Pectin lyase-like superfamily protein] -0.166 -0.275
136 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 -0.165 -0.026
137 246765_at AT5G27330 [Prefoldin chaperone subunit family protein] -0.161 -0.013
138 265695_at AT2G24490 ATRPA2, ATRPA32A, ROR1, SUPPRESSOR OF ROS1, RPA2, replicon protein A2, RPA32A -0.160 -0.003
139 249874_at AT5G23070 AtTK1b, TK1b, thymidine kinase 1b -0.156 -0.026
140 260601_at AT1G55910 ZIP11, zinc transporter 11 precursor -0.156 -0.094
141 246021_at AT5G21100 [Plant L-ascorbate oxidase] -0.155 -0.053
142 248028_at AT5G55620 unknown -0.154 -0.294
143 261374_at AT1G52990 [thioredoxin family protein] -0.154 -0.069
144 255734_at AT1G25550 [myb-like transcription factor family protein] -0.154 0.040
145 256321_at AT1G55020 ATLOX1, ARABIDOPSIS LIPOXYGENASE 1, LOX1, lipoxygenase 1 -0.153 -0.162