4.0:Information of module
camta1-2
In comparison with root epidermis and lateral root cap -S help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0050896 response to stimulus BP 1.059e-19
GO:0010033 response to organic substance BP 2.494e-13
GO:0042221 response to chemical BP 8.013e-13
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009220 pyrimidine ribonucleotide biosynthetic p... BP 1.228e-13
GO:0001510 RNA methylation BP 1.558e-13
GO:0006220 pyrimidine nucleotide metabolic process BP 2.709e-13
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
camta1-2		 Log2 signal ratio
root epidermis and lateral root cap -S
1 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 0.563 0.108
2 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 0.459 -0.132
3 262552_at AT1G31350 KUF1, KAR-UP F-box 1 0.399 -0.186
4 254256_at AT4G23180 CRK10, cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 0.381 -0.416
5 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 0.373 0.021
6 256337_at AT1G72060 [serine-type endopeptidase inhibitors] 0.332 -0.124
7 261873_at AT1G11350 CBRLK1, CALMODULIN-BINDING RECEPTOR-LIKE PROTEIN KINASE, RKS2, SD1-13, S-domain-1 13 0.326 -0.117
8 254652_at AT4G18170 ATWRKY28, WRKY28, WRKY DNA-binding protein 28 0.316 -0.220
9 252173_at AT3G50650 [GRAS family transcription factor] 0.299 -0.003
10 252126_at AT3G50950 ZAR1, HOPZ-ACTIVATED RESISTANCE 1 0.271 -0.305
11 259466_at AT1G19050 ARR7, response regulator 7 0.253 0.251
12 260312_at AT1G63880 [Disease resistance protein (TIR-NBS-LRR class) family] 0.250 -0.036
13 253993_at AT4G26070 ATMEK1, MEK1, MAP kinase/ ERK kinase 1, MKK1, MITOGEN ACTIVATED PROTEIN KINASE KINASE 1, NMAPKK 0.247 -0.349
14 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 0.238 -0.005
15 266175_at AT2G02450 ANAC034, Arabidopsis NAC domain containing protein 34, ANAC035, NAC domain containing protein 35, AtLOV1, LOV1, LONG VEGETATIVE PHASE 1, NAC035, NAC domain containing protein 35 0.237 0.024
16 267550_at AT2G32800 AP4.3A, LecRK-S.2, L-type lectin receptor kinase S.2 0.235 0.169
17 258507_at AT3G06500 A/N-InvC, alkaline/neutral invertase C 0.218 0.180
18 258650_at AT3G09830 [Protein kinase superfamily protein] 0.216 -0.209
19 253827_at AT4G28085 unknown 0.206 -0.469
20 262412_at AT1G34760 GF14 OMICRON, GRF11, general regulatory factor 11, RHS5, ROOT HAIR SPECIFIC 5 0.202 -0.473
21 263457_at AT2G22300 CAMTA3, CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3, SR1, signal responsive 1 0.198 -0.357
22 249127_at AT5G43500 ARP9, actin-related protein 9, ATARP9, actin-related protein 9 0.192 0.244
23 247940_at AT5G57190 PSD2, phosphatidylserine decarboxylase 2 0.182 -0.033
24 251684_at AT3G56410 unknown 0.178 -0.269
25 263981_at AT2G42870 HLH1, HELIX-LOOP-HELIX 1, PAR1, PHY RAPIDLY REGULATED 1 0.174 -0.392
26 264624_at AT1G08930 ERD6, EARLY RESPONSE TO DEHYDRATION 6 0.172 -0.302
27 252415_at AT3G47340 ASN1, glutamine-dependent asparagine synthase 1, AT-ASN1, ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1, DIN6, DARK INDUCIBLE 6 0.171 -0.089
28 266019_at AT2G18750 [Calmodulin-binding protein] 0.170 0.085
29 251109_at AT5G01600 ATFER1, ARABIDOPSIS THALIANA FERRETIN 1, FER1, ferretin 1 0.167 0.137
30 245768_at AT1G33590 [Leucine-rich repeat (LRR) family protein] 0.164 -0.380
31 249284_at AT5G41810 unknown 0.164 -0.239
32 260881_at AT1G21550 [Calcium-binding EF-hand family protein] 0.162 -0.354
33 247126_at AT5G66080 APD9, Arabidopsis Pp2c clade D 9 0.162 -0.193
34 251402_at AT3G60290 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.161 -0.028
35 245244_at AT1G44350 ILL6, IAA-leucine resistant (ILR)-like gene 6 0.161 0.007
36 267083_at AT2G41100 ATCAL4, ARABIDOPSIS THALIANA CALMODULIN LIKE 4, TCH3, TOUCH 3 0.159 0.111
37 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 0.158 -0.279
38 259834_at AT1G69570 [Dof-type zinc finger DNA-binding family protein] 0.156 -0.003
39 245765_at AT1G33600 [Leucine-rich repeat (LRR) family protein] 0.156 -0.095
40 254032_at AT4G25940 [ENTH/ANTH/VHS superfamily protein] 0.155 -0.399
41 253414_at AT4G33050 AtIQM1, EDA39, embryo sac development arrest 39, IQM1, IQ-motif protein 1 0.153 -0.313
42 258282_at AT3G26910 [hydroxyproline-rich glycoprotein family protein] 0.153 -0.131
43 248793_at AT5G47240 atnudt8, nudix hydrolase homolog 8, NUDT8, nudix hydrolase homolog 8 0.151 0.068
44 252422_at AT3G47550 [RING/FYVE/PHD zinc finger superfamily protein] 0.149 -0.212
45 256567_at AT3G19553 PUT5, POLYAMINE UPTAKE TRANSPORTER 5 0.148 -0.357
46 267392_at AT2G44490 BGLU26, BETA GLUCOSIDASE 26, PEN2, PENETRATION 2 0.147 -0.128
47 255723_at AT3G29575 AFP3, ABI five binding protein 3 0.145 0.108
48 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.144 -0.029
49 250582_at AT5G07580 [Integrase-type DNA-binding superfamily protein] 0.142 -0.527
50 262711_at AT1G16500 unknown 0.139 0.045
51 259272_at AT3G01290 AtHIR2, HIR2, hypersensitive induced reaction 2 0.138 -0.318
52 265245_at AT2G43060 AtIBH1, IBH1, ILI1 binding bHLH 1 0.137 -0.364
53 263461_at AT2G31800 [Integrin-linked protein kinase family] 0.137 -0.131
54 245050_at ATCG00070 PSBK, photosystem II reaction center protein K precursor 0.136 -0.141
55 260486_at AT1G51550 [Kelch repeat-containing F-box family protein] 0.136 -0.049
56 266069_at AT2G18650 MEE16, maternal effect embryo arrest 16 0.136 -0.332
57 245642_at AT1G25275 unknown 0.136 -0.176
58 250777_at AT5G05440 PYL5, PYRABACTIN RESISTANCE 1-LIKE 5, RCAR8, regulatory component of ABA receptor 8 0.134 -0.529
59 267503_at AT2G45600 [alpha/beta-Hydrolases superfamily protein] 0.134 -0.114
60 256622_at AT3G28920 AtHB34, homeobox protein 34, HB34, homeobox protein 34, ZHD9, ZINC FINGER HOMEODOMAIN 9 0.134 -0.096
61 252183_at AT3G50740 UGT72E1, UDP-glucosyl transferase 72E1 0.133 -0.486
62 257516_at AT1G69040 ACR4, ACT domain repeat 4 0.131 0.024
63 261101_at AT1G63030 ddf2, DWARF AND DELAYED FLOWERING 2 0.130 0.104
64 265481_at AT2G15960 unknown 0.129 -0.169
65 251039_at AT5G02020 SIS, Salt Induced Serine rich 0.129 -0.021
66 250289_at AT5G13190 AtGILP, GILP, GSH-induced LITAF domain protein 0.129 -0.137
67 260401_at AT1G69840 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 0.127 0.129
68 255866_at AT2G30350 [Excinuclease ABC, C subunit, N-terminal] 0.126 -0.037
69 247043_at AT5G66880 SNRK2-3, SUCROSE NONFERMENTING 1 (SNF1)-RELATED PROTEIN KINASE 2-3, SNRK2.3, sucrose nonfermenting 1(SNF1)-related protein kinase 2.3, SRK2I 0.125 -0.176
70 253637_at AT4G30390 unknown 0.123 -0.345
71 252317_at AT3G48720 DCF, DEFICIENT IN CUTIN FERULATE 0.123 -0.091
72 253666_at AT4G30270 MERI-5, MERISTEM 5, MERI5B, meristem-5, SEN4, SENESCENCE 4, XTH24, xyloglucan endotransglucosylase/hydrolase 24 0.122 -0.171
73 253804_at AT4G28230 unknown 0.121 0.387
74 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.907 0.449
75 265665_at AT2G27420 [Cysteine proteinases superfamily protein] -0.674 -0.105
76 246001_at AT5G20790 unknown -0.549 -0.030
77 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.532 0.120
78 257421_at AT1G12030 unknown -0.515 -0.038
79 256619_at AT3G24460 [Serinc-domain containing serine and sphingolipid biosynthesis protein] -0.515 0.038
80 250533_at AT5G08640 ATFLS1, FLS, FLAVONOL SYNTHASE, FLS1, flavonol synthase 1 -0.461 -0.165
81 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 -0.461 0.048
82 249191_at AT5G42760 [Leucine carboxyl methyltransferase] -0.435 -0.024
83 252010_at AT3G52740 unknown -0.391 -0.186
84 252661_at AT3G44450 unknown -0.385 -0.391
85 255284_at AT4G04610 APR, APR1, APS reductase 1, ATAPR1, PRH19, PAPS REDUCTASE HOMOLOG 19 -0.361 0.329
86 264909_at AT2G17300 unknown -0.358 -0.600
87 264898_at AT1G23205 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.355 -0.399
88 260955_at AT1G06000 [UDP-Glycosyltransferase superfamily protein] -0.341 -0.179
89 261914_at AT1G65870 [Disease resistance-responsive (dirigent-like protein) family protein] -0.327 -0.098
90 254343_at AT4G21990 APR3, APS reductase 3, ATAPR3, PRH-26, PRH26, PAPS REDUCTASE HOMOLOG 26 -0.322 0.184
91 250794_at AT5G05270 AtCHIL, CHIL, chalcone isomerase like -0.306 -0.023
92 259348_at AT3G03770 [Leucine-rich repeat protein kinase family protein] -0.298 0.144
93 252414_at AT3G47420 AtG3Pp1, Glycerol-3-phosphate permease 1, ATPS3, phosphate starvation-induced gene 3, G3Pp1, Glycerol-3-phosphate permease 1, PS3, phosphate starvation-induced gene 3 -0.285 -0.330
94 246932_at AT5G25190 ESE3, ethylene and salt inducible 3 -0.283 -0.207
95 250049_at AT5G17780 [alpha/beta-Hydrolases superfamily protein] -0.280 0.091
96 246597_at AT5G14760 AO, L-aspartate oxidase, FIN4, FLAGELLIN-INSENSITIVE 4 -0.276 0.071
97 253946_at AT4G26790 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.271 -0.067
98 254683_at AT4G13800 unknown -0.265 -0.125
99 266253_at AT2G27840 HD2D, histone deacetylase 2D, HDA13, HISTONE DEACETYLASE 13, HDT04, HDT4 -0.262 0.866
100 254744_at AT4G13345 MEE55, maternal effect embryo arrest 55 -0.261 0.145
101 247055_at AT5G66740 unknown -0.260 0.039
102 250478_at AT5G10250 DOT3, DEFECTIVELY ORGANIZED TRIBUTARIES 3 -0.260 -0.012
103 252073_at AT3G51750 unknown -0.255 0.272
104 253835_at AT4G27820 BGLU9, beta glucosidase 9 -0.245 0.000
105 258396_at AT3G15460 [Ribosomal RNA processing Brix domain protein] -0.242 0.448
106 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 -0.234 -0.452
107 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase -0.231 0.111
108 264745_at AT1G62180 5'adenylylphosphosulfate reductase 2 -0.230 0.275
109 249063_at AT5G44110 ABCI21, ATP-binding cassette A21, ATNAP2, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN, ATPOP1, POP1 -0.221 -0.027
110 260070_at AT1G73830 BEE3, BR enhanced expression 3 -0.220 -0.112
111 265121_at AT1G62560 FMO GS-OX3, flavin-monooxygenase glucosinolate S-oxygenase 3 -0.209 0.000
112 256379_at AT1G66840 PMI2, plastid movement impaired 2, WEB2, WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 -0.207 0.059
113 251476_at AT3G59670 unknown -0.204 0.929
114 247760_at AT5G59130 [Subtilase family protein] -0.199 -0.036
115 252363_at AT3G48460 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.197 0.330
116 257793_at AT3G26960 [Pollen Ole e 1 allergen and extensin family protein] -0.197 -0.078
117 254430_at AT4G20820 [FAD-binding Berberine family protein] -0.196 -0.245
118 254076_at AT4G25340 ATFKBP53, FKBP53, FK506 BINDING PROTEIN 53 -0.195 0.691
119 254056_at AT4G25250 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.189 -0.551
120 258167_at AT3G21560 BRT1, Bright Trichomes 1, UGT84A2, UDP-glucosyl transferase 84A2 -0.186 -0.450
121 263847_at AT2G36970 [UDP-Glycosyltransferase superfamily protein] -0.185 0.008
122 252193_at AT3G50060 MYB77, myb domain protein 77 -0.182 -0.011
123 258349_at AT3G17609 HYH, HY5-homolog -0.179 -0.277
124 260331_at AT1G80270 PPR596, PENTATRICOPEPTIDE REPEAT 596 -0.179 0.717
125 267089_at AT2G38300 [myb-like HTH transcriptional regulator family protein] -0.179 -0.139
126 252343_at AT3G48610 NPC6, non-specific phospholipase C6 -0.179 0.258
127 251020_at AT5G02270 ABCI20, ATP-binding cassette I20, ATNAP9, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 9, NAP9, non-intrinsic ABC protein 9 -0.176 -0.064
128 248961_at AT5G45650 [subtilase family protein] -0.176 -0.844
129 251827_at AT3G55120 A11, AtCHI, CFI, CHALCONE FLAVANONE ISOMERASE, CHI, chalcone isomerase, TT5, TRANSPARENT TESTA 5 -0.176 -0.187
130 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 -0.175 0.097
131 247486_at AT5G62140 unknown -0.174 -0.066
132 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI -0.169 -0.117
133 253097_at AT4G37320 CYP81D5, cytochrome P450, family 81, subfamily D, polypeptide 5 -0.169 -0.085
134 255874_at AT2G40550 ETG1, E2F target gene 1 -0.169 0.626
135 258252_at AT3G15720 [Pectin lyase-like superfamily protein] -0.166 0.902
136 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 -0.165 -0.066
137 246765_at AT5G27330 [Prefoldin chaperone subunit family protein] -0.161 0.844
138 265695_at AT2G24490 ATRPA2, ATRPA32A, ROR1, SUPPRESSOR OF ROS1, RPA2, replicon protein A2, RPA32A -0.160 0.460
139 249874_at AT5G23070 AtTK1b, TK1b, thymidine kinase 1b -0.156 0.462
140 260601_at AT1G55910 ZIP11, zinc transporter 11 precursor -0.156 -0.044
141 246021_at AT5G21100 [Plant L-ascorbate oxidase] -0.155 0.036
142 248028_at AT5G55620 unknown -0.154 -0.141
143 261374_at AT1G52990 [thioredoxin family protein] -0.154 0.115
144 255734_at AT1G25550 [myb-like transcription factor family protein] -0.154 -0.075
145 256321_at AT1G55020 ATLOX1, ARABIDOPSIS LIPOXYGENASE 1, LOX1, lipoxygenase 1 -0.153 -0.299