4.0:Information of module
sfr6 cold
In comparison with hda9 dryseed help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0008643 carbohydrate transport BP 1.402e-04
GO:0009683 indoleacetic acid metabolic process BP 6.049e-03
GO:0009684 indoleacetic acid biosynthetic process BP 6.049e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048467 gynoecium development BP 4.236e-03
GO:0042732 D-xylose metabolic process BP 9.142e-03
GO:0035670 plant-type ovary development BP 9.483e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
sfr6 cold		 Log2 signal ratio
hda9 dryseed
1 251248_at AT3G62150 ABCB21, ATP-binding cassette B21, PGP21, P-glycoprotein 21 0.158 0.111
2 256455_at AT1G75190 unknown 0.145 -0.009
3 250011_at AT5G18475 [Pentatricopeptide repeat (PPR) superfamily protein] 0.129 0.013
4 261873_at AT1G11350 CBRLK1, CALMODULIN-BINDING RECEPTOR-LIKE PROTEIN KINASE, RKS2, SD1-13, S-domain-1 13 0.118 0.207
5 264767_at AT1G61380 SD1-29, S-domain-1 29 0.118 0.076
6 263632_at AT2G04795 unknown 0.117 0.088
7 265464_at AT2G37080 RIP2, ROP interactive partner 2 0.114 0.115
8 261750_at AT1G76120 [Pseudouridine synthase family protein] 0.111 0.113
9 250728_at AT5G06440 unknown 0.110 0.020
10 248496_at AT5G50790 AtSWEET10, SWEET10 0.107 0.039
11 257074_at AT3G19660 unknown 0.105 0.063
12 259329_at AT3G16360 AHP4, HPT phosphotransmitter 4 0.093 0.028
13 246146_at AT5G20050 [Protein kinase superfamily protein] 0.092 0.012
14 259293_at AT3G11580 [AP2/B3-like transcriptional factor family protein] 0.089 -0.036
15 266431_at AT2G07230 [Mutator-like transposase family, has a 8.1e-59 P-value blast match to Q9SHN7 /450-633 Pfam PF03108 MuDR family transposase (MuDr-element domain)] 0.081 0.013
16 263437_at AT2G28670 ESB1, ENHANCED SUBERIN 1 0.066 -0.072
17 259677_at AT1G77740 PIP5K2, phosphatidylinositol-4-phosphate 5-kinase 2 0.066 -0.002
18 261639_at AT1G50010 TUA2, tubulin alpha-2 chain -0.360 -0.198
19 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] -0.112 0.061
20 253108_at AT4G35900 atbzip14, FD, FD-1 -0.107 -0.053
21 254246_at AT4G23250 CRK17, CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 17, DUF26-21, EMB1290, EMBRYO DEFECTIVE 1290, RKC1, RECEPTOR-LIKE KINASE THALIANACOL-0GENOMICLIBRARY(CLONTECH).THEPOSITIVEPHAGECLONES C-X8-C-X2-C CLASS 1 -0.106 -0.011
22 264917_at AT1G60500 DRP4C, Dynamin related protein 4C -0.104 -0.064
23 246737_at AT5G27710 unknown -0.104 0.029
24 261181_at AT1G34580 [Major facilitator superfamily protein] -0.098 -0.051
25 245477_at AT4G16110 ARR2, response regulator 2, RR2, response regulator 2 -0.095 0.027
26 256275_at AT3G12110 ACT11, actin-11 -0.095 -0.128
27 253155_at AT4G35720 unknown -0.092 0.017
28 246346_at AT3G56810 unknown -0.089 -0.060
29 247499_at AT5G61865 unknown -0.088 0.123
30 265151_at AT1G51340 [MATE efflux family protein] -0.082 0.037
31 261274_at AT1G26780 AtMYB117, myb domain protein 117, LOF1, LATERAL ORGAN FUSION 1, MYB117, myb domain protein 117 -0.074 0.038
32 259010_at AT3G07340 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.074 -0.116
33 257403_at AT1G62520 unknown -0.073 -0.020