4.0:Information of module
sfr3 control
In comparison with Pto inoculated help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006352 DNA-templated transcription, initiation BP 1.540e-02
GO:1900864 mitochondrial RNA modification BP 1.556e-02
GO:0000959 mitochondrial RNA metabolic process BP 1.877e-02
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044764 multi-organism cellular process BP 7.522e-03
GO:0046685 response to arsenic-containing substance BP 1.169e-02
GO:0045926 negative regulation of growth BP 2.539e-02
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
sfr3 control		 Log2 signal ratio
Pto inoculated
1 247718_at AT5G59310 LTP4, lipid transfer protein 4 1.309 0.788
2 247717_at AT5G59320 LTP3, lipid transfer protein 3 1.152 0.678
3 263497_at AT2G42540 COR15, COR15A, cold-regulated 15a 0.391 0.068
4 254700_at AT4G18000 unknown 0.319 -0.007
5 248337_at AT5G52310 COR78, COLD REGULATED 78, LTI140, LTI78, LOW-TEMPERATURE-INDUCED 78, RD29A, RESPONSIVE TO DESSICATION 29A 0.278 0.112
6 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 0.241 0.166
7 262281_at AT1G68570 AtNPF3.1, NPF3.1, NRT1/ PTR family 3.1 0.194 -0.039
8 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE 0.156 0.552
9 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.139 0.118
10 249055_at AT5G44460 CML43, calmodulin like 43 0.124 0.147
11 248271_at AT5G53420 [CCT motif family protein] 0.109 0.162
12 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 0.105 0.075
13 261192_at AT1G32870 ANAC013, Arabidopsis NAC domain containing protein 13, ANAC13, NAC domain protein 13, NAC13, NAC domain protein 13 0.101 0.265
14 266000_at AT2G24180 CYP71B6, cytochrome p450 71b6 0.086 0.039
15 259899_at AT1G71210 [Pentatricopeptide repeat (PPR) superfamily protein] 0.084 0.003
16 250502_at AT5G09590 HSC70-5, HEAT SHOCK COGNATE, MTHSC70-2, mitochondrial HSO70 2 0.082 0.049
17 251586_at AT3G58070 GIS, GLABROUS INFLORESCENCE STEMS 0.073 -0.002
18 257120_at AT3G20200 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.073 0.020
19 251432_at AT3G59820 AtLETM1, LETM1, leucine zipper-EF-hand-containing transmembrane protein 1 0.069 -0.022
20 256321_at AT1G55020 ATLOX1, ARABIDOPSIS LIPOXYGENASE 1, LOX1, lipoxygenase 1 0.068 0.011
21 265718_at AT2G03340 WRKY3, WRKY DNA-binding protein 3 0.067 -0.050
22 261639_at AT1G50010 TUA2, tubulin alpha-2 chain -0.433 -0.003
23 248423_at AT5G51670 unknown -0.140 -0.115
24 259596_at AT1G28130 GH3.17 -0.137 -0.039
25 246079_at AT5G20450 unknown -0.104 -0.217
26 260809_at AT1G43730 [RNA-directed DNA polymerase (reverse transcriptase)-related family protein] -0.100 0.074
27 257102_at AT3G25050 XTH3, xyloglucan endotransglucosylase/hydrolase 3 -0.099 -0.006
28 266163_at AT2G28130 unknown -0.095 0.105
29 259958_at AT1G53730 SRF6, STRUBBELIG-receptor family 6 -0.087 -0.108
30 257202_at AT3G23750 BARK1, BAK1-Associating Receptor-Like Kinase 1 -0.083 -0.214
31 261926_at AT1G22530 PATL2, PATELLIN 2 -0.081 -0.117
32 261714_at AT1G18510 TET16, tetraspanin 16 -0.078 0.112
33 265951_at AT2G18500 ATOFP7, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 7, OFP7, ovate family protein 7 -0.072 0.045
34 255538_at AT4G01680 AtMYB55, myb domain protein 55, MYB55, myb domain protein 55 -0.072 0.025
35 256646_at AT3G13590 [Cysteine/Histidine-rich C1 domain family protein] -0.071 -0.018
36 254511_at AT4G20220 [Reverse transcriptase (RNA-dependent DNA polymerase)] -0.071 0.141
37 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 -0.071 0.033
38 247219_at AT5G64920 CIP8, COP1-interacting protein 8 -0.070 -0.059
39 256054_at AT1G07120 unknown -0.070 -0.018
40 246371_at AT1G51940 LYK3, LysM-containing receptor-like kinase 3 -0.070 -0.287
41 250396_at AT5G10970 [C2H2 and C2HC zinc fingers superfamily protein] -0.070 -0.100