4.0:Information of module
sfr3 control
In comparison with seedlings by volatiles from leafminer damaged Lima bean 48h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006352 DNA-templated transcription, initiation BP 1.540e-02
GO:1900864 mitochondrial RNA modification BP 1.556e-02
GO:0000959 mitochondrial RNA metabolic process BP 1.877e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044764 multi-organism cellular process BP 7.522e-03
GO:0046685 response to arsenic-containing substance BP 1.169e-02
GO:0045926 negative regulation of growth BP 2.539e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
sfr3 control		 Log2 signal ratio
seedlings by volatiles from leafminer damaged Lima bean 48h
1 247718_at AT5G59310 LTP4, lipid transfer protein 4 1.309 0.500
2 247717_at AT5G59320 LTP3, lipid transfer protein 3 1.152 0.685
3 263497_at AT2G42540 COR15, COR15A, cold-regulated 15a 0.391 0.319
4 254700_at AT4G18000 unknown 0.319 -0.003
5 248337_at AT5G52310 COR78, COLD REGULATED 78, LTI140, LTI78, LOW-TEMPERATURE-INDUCED 78, RD29A, RESPONSIVE TO DESSICATION 29A 0.278 0.024
6 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 0.241 0.195
7 262281_at AT1G68570 AtNPF3.1, NPF3.1, NRT1/ PTR family 3.1 0.194 0.157
8 262644_at AT1G62710 BETA-VPE, beta vacuolar processing enzyme, BETAVPE 0.156 0.432
9 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.139 0.315
10 249055_at AT5G44460 CML43, calmodulin like 43 0.124 -0.004
11 248271_at AT5G53420 [CCT motif family protein] 0.109 0.257
12 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 0.105 0.235
13 261192_at AT1G32870 ANAC013, Arabidopsis NAC domain containing protein 13, ANAC13, NAC domain protein 13, NAC13, NAC domain protein 13 0.101 0.114
14 266000_at AT2G24180 CYP71B6, cytochrome p450 71b6 0.086 0.067
15 259899_at AT1G71210 [Pentatricopeptide repeat (PPR) superfamily protein] 0.084 0.034
16 250502_at AT5G09590 HSC70-5, HEAT SHOCK COGNATE, MTHSC70-2, mitochondrial HSO70 2 0.082 0.134
17 251586_at AT3G58070 GIS, GLABROUS INFLORESCENCE STEMS 0.073 0.059
18 257120_at AT3G20200 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] 0.073 -0.057
19 251432_at AT3G59820 AtLETM1, LETM1, leucine zipper-EF-hand-containing transmembrane protein 1 0.069 0.112
20 256321_at AT1G55020 ATLOX1, ARABIDOPSIS LIPOXYGENASE 1, LOX1, lipoxygenase 1 0.068 0.114
21 265718_at AT2G03340 WRKY3, WRKY DNA-binding protein 3 0.067 0.010
22 261639_at AT1G50010 TUA2, tubulin alpha-2 chain -0.433 -0.037
23 248423_at AT5G51670 unknown -0.140 -0.096
24 259596_at AT1G28130 GH3.17 -0.137 -0.095
25 246079_at AT5G20450 unknown -0.104 -0.068
26 260809_at AT1G43730 [RNA-directed DNA polymerase (reverse transcriptase)-related family protein] -0.100 -0.046
27 257102_at AT3G25050 XTH3, xyloglucan endotransglucosylase/hydrolase 3 -0.099 0.014
28 266163_at AT2G28130 unknown -0.095 0.036
29 259958_at AT1G53730 SRF6, STRUBBELIG-receptor family 6 -0.087 -0.078
30 257202_at AT3G23750 BARK1, BAK1-Associating Receptor-Like Kinase 1 -0.083 -0.108
31 261926_at AT1G22530 PATL2, PATELLIN 2 -0.081 -0.106
32 261714_at AT1G18510 TET16, tetraspanin 16 -0.078 -0.011
33 265951_at AT2G18500 ATOFP7, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 7, OFP7, ovate family protein 7 -0.072 -0.024
34 255538_at AT4G01680 AtMYB55, myb domain protein 55, MYB55, myb domain protein 55 -0.072 -0.002
35 256646_at AT3G13590 [Cysteine/Histidine-rich C1 domain family protein] -0.071 0.037
36 254511_at AT4G20220 [Reverse transcriptase (RNA-dependent DNA polymerase)] -0.071 -0.059
37 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 -0.071 -0.051
38 247219_at AT5G64920 CIP8, COP1-interacting protein 8 -0.070 -0.085
39 256054_at AT1G07120 unknown -0.070 0.018
40 246371_at AT1G51940 LYK3, LysM-containing receptor-like kinase 3 -0.070 -0.036
41 250396_at AT5G10970 [C2H2 and C2HC zinc fingers superfamily protein] -0.070 -0.106